RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
SCAMP1-203ENST00000510030 ZNF326Q5BKZ1 582 aaKnown RBP23.77■■□□□ 1.4
SCAMP1-203ENST00000510030 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
SCAMP1-203ENST00000510030 KIAA1210Q9ULL0 1709 aa23.75■■□□□ 1.39
SCAMP1-203ENST00000510030 ZFYVE9O95405 1425 aa23.74■■□□□ 1.39
SCAMP1-203ENST00000510030 TRPM1Q7Z4N2 1603 aa23.73■■□□□ 1.39
SCAMP1-203ENST00000510030 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
SCAMP1-203ENST00000510030 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
SCAMP1-203ENST00000510030 LAMC1P11047 1609 aa23.72■■□□□ 1.39
SCAMP1-203ENST00000510030 MYO3AQ8NEV4 1616 aa23.72■■□□□ 1.39
SCAMP1-203ENST00000510030 MYO5BQ9ULV0 1848 aa23.72■■□□□ 1.39
SCAMP1-203ENST00000510030 A2ML1A8K2U0 1454 aa23.71■■□□□ 1.39
SCAMP1-203ENST00000510030 NRXN1Q9ULB1 1477 aa23.71■■□□□ 1.39
SCAMP1-203ENST00000510030 VGFO15240 615 aaPredicted RBP23.71■■□□□ 1.39
SCAMP1-203ENST00000510030 HDGFP51858 240 aaKnown RBP23.71■■□□□ 1.39
SCAMP1-203ENST00000510030 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
SCAMP1-203ENST00000510030 UBR1Q8IWV7 1749 aa23.7■■□□□ 1.39
SCAMP1-203ENST00000510030 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
SCAMP1-203ENST00000510030 ZNF142P52746 1687 aaPredicted RBP23.67■■□□□ 1.38
SCAMP1-203ENST00000510030 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
SCAMP1-203ENST00000510030 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
SCAMP1-203ENST00000510030 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
SCAMP1-203ENST00000510030 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
SCAMP1-203ENST00000510030 LTBP4Q8N2S1 1624 aa23.65■■□□□ 1.38
SCAMP1-203ENST00000510030 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
SCAMP1-203ENST00000510030 PIK3C2GO75747 1445 aa23.64■■□□□ 1.37
SCAMP1-203ENST00000510030 CEP170BQ9Y4F5 1589 aaPredicted RBP23.64■■□□□ 1.37
SCAMP1-203ENST00000510030 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
SCAMP1-203ENST00000510030 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
SCAMP1-203ENST00000510030 SETBP1Q9Y6X0 1596 aa23.62■■□□□ 1.37
SCAMP1-203ENST00000510030 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
SCAMP1-203ENST00000510030 THEMISQ8N1K5 641 aaPredicted RBP23.6■■□□□ 1.37
SCAMP1-203ENST00000510030 SLIT1O75093 1534 aa23.59■■□□□ 1.37
SCAMP1-203ENST00000510030 CARD11Q9BXL7 1154 aa23.59■■□□□ 1.37
SCAMP1-203ENST00000510030 TMEM2Q9UHN6 1383 aa23.59■■□□□ 1.37
SCAMP1-203ENST00000510030 ZNF335Q9H4Z2 1342 aaPredicted RBP23.58■■□□□ 1.36
SCAMP1-203ENST00000510030 ADGRF5Q8IZF2 1346 aa23.57■■□□□ 1.36
SCAMP1-203ENST00000510030 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
SCAMP1-203ENST00000510030 USP47Q96K76 1375 aa23.55■■□□□ 1.36
SCAMP1-203ENST00000510030 ARHGAP23Q9P227 1491 aa23.55■■□□□ 1.36
SCAMP1-203ENST00000510030 EID1Q9Y6B2 187 aa23.54■■□□□ 1.36
SCAMP1-203ENST00000510030 IQGAP1P46940 1657 aa23.52■■□□□ 1.36
SCAMP1-203ENST00000510030 SCAF11Q99590 1463 aaKnown RBP23.52■■□□□ 1.36
SCAMP1-203ENST00000510030 C14orf93Q9H972 538 aaKnown RBP23.52■■□□□ 1.36
SCAMP1-203ENST00000510030 SLC24A1O60721 1099 aa23.49■■□□□ 1.35
SCAMP1-203ENST00000510030 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
SCAMP1-203ENST00000510030 HSPA5P11021 654 aaKnown RBP23.47■■□□□ 1.35
SCAMP1-203ENST00000510030 ADGRB1O14514 1584 aa23.46■■□□□ 1.35
SCAMP1-203ENST00000510030 POLR1AO95602 1720 aaPredicted RBP23.46■■□□□ 1.35
SCAMP1-203ENST00000510030 DIP2AQ14689 1571 aa23.46■■□□□ 1.35
SCAMP1-203ENST00000510030 CFAP70Q5T0N1 1121 aa23.46■■□□□ 1.35
SCAMP1-203ENST00000510030 ALKQ9UM73 1620 aa23.46■■□□□ 1.35
SCAMP1-203ENST00000510030 NBPF1Q3BBV0 1214 aa23.45■■□□□ 1.34
SCAMP1-203ENST00000510030 NUTM2DQ5VT03 806 aaPredicted RBP23.42■■□□□ 1.34
SCAMP1-203ENST00000510030 TXNDC2Q86VQ3 553 aa23.42■■□□□ 1.34
SCAMP1-203ENST00000510030 NRXN3Q9Y4C0 1643 aa23.41■■□□□ 1.34
SCAMP1-203ENST00000510030 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
SCAMP1-203ENST00000510030 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.33
SCAMP1-203ENST00000510030 DISP3Q9P2K9 1392 aa23.39■■□□□ 1.33
SCAMP1-203ENST00000510030 ILDR2Q71H61 639 aa23.38■■□□□ 1.33
SCAMP1-203ENST00000510030 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
SCAMP1-203ENST00000510030 BCANQ96GW7 911 aa23.36■■□□□ 1.33
SCAMP1-203ENST00000510030 SBNO2Q9Y2G9 1366 aa23.36■■□□□ 1.33
SCAMP1-203ENST00000510030 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
SCAMP1-203ENST00000510030 DLC1Q96QB1 1528 aa23.35■■□□□ 1.33
SCAMP1-203ENST00000510030 ST20-MTHFSA0A0A6YYL1 179 aa23.35■■□□□ 1.33
SCAMP1-203ENST00000510030 UBAP1LF5GYI3 381 aa23.35■■□□□ 1.33
SCAMP1-203ENST00000510030 YTHDC2Q9H6S0 1430 aaKnown RBP23.34■■□□□ 1.33
SCAMP1-203ENST00000510030 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
SCAMP1-203ENST00000510030 ARHGEF28Q8N1W1 1705 aaKnown RBP23.34■■□□□ 1.33
SCAMP1-203ENST00000510030 LTKP29376 864 aa23.34■■□□□ 1.33
SCAMP1-203ENST00000510030 MED14O60244 1454 aa23.32■■□□□ 1.32
SCAMP1-203ENST00000510030 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
SCAMP1-203ENST00000510030 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
SCAMP1-203ENST00000510030 CDCA8Q53HL2 280 aa23.32■■□□□ 1.32
SCAMP1-203ENST00000510030 ADAMTS13Q76LX8 1427 aa23.32■■□□□ 1.32
SCAMP1-203ENST00000510030 TBX22Q9Y458 520 aa23.31■■□□□ 1.32
SCAMP1-203ENST00000510030 CENPJQ9HC77 1338 aaPredicted RBP23.31■■□□□ 1.32
SCAMP1-203ENST00000510030 TMF1P82094 1093 aa23.3■■□□□ 1.32
SCAMP1-203ENST00000510030 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
SCAMP1-203ENST00000510030 QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
SCAMP1-203ENST00000510030 TECPR2O15040 1411 aa23.29■■□□□ 1.32
SCAMP1-203ENST00000510030 HIRIP3Q9BW71 556 aaPredicted RBP23.29■■□□□ 1.32
SCAMP1-203ENST00000510030 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
SCAMP1-203ENST00000510030 CCDC7Q96M83 1385 aa23.27■■□□□ 1.32
SCAMP1-203ENST00000510030 CPS1P31327 1500 aa23.27■■□□□ 1.32
SCAMP1-203ENST00000510030 NPHP4O75161 1426 aaPredicted RBP23.26■■□□□ 1.31
SCAMP1-203ENST00000510030 SIRT1Q96EB6 747 aa23.26■■□□□ 1.31
SCAMP1-203ENST00000510030 TRAK1Q9UPV9 953 aa23.26■■□□□ 1.31
SCAMP1-203ENST00000510030 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
SCAMP1-203ENST00000510030 TESK2Q96S53 571 aa23.24■■□□□ 1.31
SCAMP1-203ENST00000510030 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
SCAMP1-203ENST00000510030 PIP4K2BP78356 416 aa23.23■■□□□ 1.31
SCAMP1-203ENST00000510030 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
SCAMP1-203ENST00000510030 WASHC2AQ641Q2 1341 aa23.23■■□□□ 1.31
SCAMP1-203ENST00000510030 METP08581 1390 aa23.23■■□□□ 1.31
SCAMP1-203ENST00000510030 KIF7Q2M1P5 1343 aa23.22■■□□□ 1.31
SCAMP1-203ENST00000510030 STRCP1A6NGW2 1772 aa23.22■■□□□ 1.31
SCAMP1-203ENST00000510030 PTCH1Q13635 1447 aa23.2■■□□□ 1.3
SCAMP1-203ENST00000510030 POGKQ9P215 609 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms