RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 KDM5AP29375 1690 aaKnown RBP22.64■■□□□ 1.21
APBB3-214ENST00000509914 CEP170BQ9Y4F5 1589 aaPredicted RBP22.64■■□□□ 1.21
APBB3-214ENST00000509914 NEXMIFQ5QGS0 1516 aa22.63■■□□□ 1.21
APBB3-214ENST00000509914 NBPF8Q3BBV2 869 aa22.62■■□□□ 1.21
APBB3-214ENST00000509914 UHRF1BP1Q6BDS2 1440 aa22.61■■□□□ 1.21
APBB3-214ENST00000509914 SETD1BQ9UPS6 1966 aaKnown RBP22.6■■□□□ 1.21
APBB3-214ENST00000509914 NUTM2DQ5VT03 806 aaPredicted RBP22.6■■□□□ 1.21
APBB3-214ENST00000509914 IFT172Q9UG01 1749 aa22.6■■□□□ 1.21
APBB3-214ENST00000509914 ZNF142P52746 1687 aaPredicted RBP22.6■■□□□ 1.21
APBB3-214ENST00000509914 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
APBB3-214ENST00000509914 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
APBB3-214ENST00000509914 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
APBB3-214ENST00000509914 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
APBB3-214ENST00000509914 MYOM2P54296 1465 aa22.59■■□□□ 1.21
APBB3-214ENST00000509914 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
APBB3-214ENST00000509914 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.21
APBB3-214ENST00000509914 PPLO60437 1756 aa22.58■■□□□ 1.21
APBB3-214ENST00000509914 PRAG1Q86YV5 1406 aa22.58■■□□□ 1.21
APBB3-214ENST00000509914 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
APBB3-214ENST00000509914 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
APBB3-214ENST00000509914 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
APBB3-214ENST00000509914 SLIT1O75093 1534 aa22.55■■□□□ 1.2
APBB3-214ENST00000509914 LTKP29376 864 aa22.53■■□□□ 1.2
APBB3-214ENST00000509914 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.19
APBB3-214ENST00000509914 PIK3C2GO75747 1445 aa22.51■■□□□ 1.19
APBB3-214ENST00000509914 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
APBB3-214ENST00000509914 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
APBB3-214ENST00000509914 LMTK3Q96Q04 1460 aa22.48■■□□□ 1.19
APBB3-214ENST00000509914 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
APBB3-214ENST00000509914 EID1Q9Y6B2 187 aa22.47■■□□□ 1.19
APBB3-214ENST00000509914 CFAP70Q5T0N1 1121 aa22.47■■□□□ 1.19
APBB3-214ENST00000509914 RALGAPBQ86X10 1494 aa22.46■■□□□ 1.19
APBB3-214ENST00000509914 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
APBB3-214ENST00000509914 TRPM1Q7Z4N2 1603 aa22.45■■□□□ 1.18
APBB3-214ENST00000509914 C14orf93Q9H972 538 aaKnown RBP22.45■■□□□ 1.18
APBB3-214ENST00000509914 SCAF11Q99590 1463 aaKnown RBP22.45■■□□□ 1.18
APBB3-214ENST00000509914 HSPA2P54652 639 aa22.43■■□□□ 1.18
APBB3-214ENST00000509914 ANKLE2Q86XL3 938 aa22.43■■□□□ 1.18
APBB3-214ENST00000509914 PLEKHG1Q9ULL1 1385 aa22.43■■□□□ 1.18
APBB3-214ENST00000509914 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
APBB3-214ENST00000509914 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
APBB3-214ENST00000509914 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
APBB3-214ENST00000509914 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
APBB3-214ENST00000509914 KIAA1210Q9ULL0 1709 aa22.39■■□□□ 1.17
APBB3-214ENST00000509914 ALKQ9UM73 1620 aa22.39■■□□□ 1.17
APBB3-214ENST00000509914 NCKAP5LQ9HCH0 1330 aa22.39■■□□□ 1.17
APBB3-214ENST00000509914 ADAMTS13Q76LX8 1427 aa22.38■■□□□ 1.17
APBB3-214ENST00000509914 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
APBB3-214ENST00000509914 TMEM132EQ6IEE7 984 aa22.36■■□□□ 1.17
APBB3-214ENST00000509914 BCANQ96GW7 911 aa22.36■■□□□ 1.17
APBB3-214ENST00000509914 IQGAP1P46940 1657 aa22.36■■□□□ 1.17
APBB3-214ENST00000509914 ADGRB1O14514 1584 aa22.36■■□□□ 1.17
APBB3-214ENST00000509914 MED14O60244 1454 aa22.35■■□□□ 1.17
APBB3-214ENST00000509914 LAMC1P11047 1609 aa22.35■■□□□ 1.17
APBB3-214ENST00000509914 ASXL1Q8IXJ9 1541 aa22.35■■□□□ 1.17
APBB3-214ENST00000509914 SLC26A8Q96RN1 970 aa22.34■■□□□ 1.17
APBB3-214ENST00000509914 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
APBB3-214ENST00000509914 METP08581 1390 aa22.33■■□□□ 1.16
APBB3-214ENST00000509914 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.16
APBB3-214ENST00000509914 POLR1AO95602 1720 aaPredicted RBP22.31■■□□□ 1.16
APBB3-214ENST00000509914 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
APBB3-214ENST00000509914 USP47Q96K76 1375 aa22.29■■□□□ 1.16
APBB3-214ENST00000509914 HSPA5P11021 654 aaKnown RBP22.28■■□□□ 1.16
APBB3-214ENST00000509914 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
APBB3-214ENST00000509914 DIP2AQ14689 1571 aa22.27■■□□□ 1.16
APBB3-214ENST00000509914 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
APBB3-214ENST00000509914 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
APBB3-214ENST00000509914 STRCQ7RTU9 1775 aa22.26■■□□□ 1.15
APBB3-214ENST00000509914 STK26Q9P289 416 aa22.25■■□□□ 1.15
APBB3-214ENST00000509914 TRAK1Q9UPV9 953 aa22.25■■□□□ 1.15
APBB3-214ENST00000509914 LRPPRCP42704 1394 aaKnown RBP22.24■■□□□ 1.15
APBB3-214ENST00000509914 PTPRUQ92729 1446 aa22.24■■□□□ 1.15
APBB3-214ENST00000509914 ST20-MTHFSA0A0A6YYL1 179 aa22.22■■□□□ 1.15
APBB3-214ENST00000509914 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
APBB3-214ENST00000509914 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
APBB3-214ENST00000509914 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
APBB3-214ENST00000509914 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
APBB3-214ENST00000509914 TECPR2O15040 1411 aa22.17■■□□□ 1.14
APBB3-214ENST00000509914 MIER1Q8N108 512 aa22.17■■□□□ 1.14
APBB3-214ENST00000509914 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
APBB3-214ENST00000509914 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
APBB3-214ENST00000509914 TESK2Q96S53 571 aa22.16■■□□□ 1.14
APBB3-214ENST00000509914 ARHGEF28Q8N1W1 1705 aaKnown RBP22.15■■□□□ 1.14
APBB3-214ENST00000509914 ROBO2Q9HCK4 1378 aa22.15■■□□□ 1.14
APBB3-214ENST00000509914 PRAM1Q96QH2 718 aa22.14■■□□□ 1.14
APBB3-214ENST00000509914 CENPJQ9HC77 1338 aaPredicted RBP22.14■■□□□ 1.13
APBB3-214ENST00000509914 KNDC1Q76NI1 1749 aa22.13■■□□□ 1.13
APBB3-214ENST00000509914 KCNA6P17658 529 aa22.13■■□□□ 1.13
APBB3-214ENST00000509914 WAPLQ7Z5K2 1190 aa22.13■■□□□ 1.13
APBB3-214ENST00000509914 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
APBB3-214ENST00000509914 CPS1P31327 1500 aa22.13■■□□□ 1.13
APBB3-214ENST00000509914 XRN1Q8IZH2 1706 aaKnown RBP22.13■■□□□ 1.13
APBB3-214ENST00000509914 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
APBB3-214ENST00000509914 CHD2O14647 1828 aaKnown RBP22.11■■□□□ 1.13
APBB3-214ENST00000509914 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
APBB3-214ENST00000509914 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
APBB3-214ENST00000509914 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
APBB3-214ENST00000509914 PTCH1Q13635 1447 aa22.1■■□□□ 1.13
APBB3-214ENST00000509914 POGKQ9P215 609 aa22.1■■□□□ 1.13
APBB3-214ENST00000509914 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms