RNA–Protein interactions for RNA: ENST00000509553.1

SH3TC1-218, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-218ENST00000509553 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
SH3TC1-218ENST00000509553 THEMISQ8N1K5 641 aaPredicted RBP22.32■■□□□ 1.16
SH3TC1-218ENST00000509553 TMEM2Q9UHN6 1383 aa22.32■■□□□ 1.16
SH3TC1-218ENST00000509553 ZFYVE9O95405 1425 aa22.31■■□□□ 1.16
SH3TC1-218ENST00000509553 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
SH3TC1-218ENST00000509553 L3MBTL2Q969R5 705 aa22.28■■□□□ 1.16
SH3TC1-218ENST00000509553 LTKP29376 864 aa22.27■■□□□ 1.16
SH3TC1-218ENST00000509553 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
SH3TC1-218ENST00000509553 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
SH3TC1-218ENST00000509553 TONSLQ96HA7 1378 aa22.26■■□□□ 1.15
SH3TC1-218ENST00000509553 ILDR1Q86SU0 546 aaPredicted RBP22.26■■□□□ 1.15
SH3TC1-218ENST00000509553 SCAF11Q99590 1463 aaKnown RBP22.25■■□□□ 1.15
SH3TC1-218ENST00000509553 TXNDC2Q86VQ3 553 aa22.24■■□□□ 1.15
SH3TC1-218ENST00000509553 DCAF11Q8TEB1 546 aa22.24■■□□□ 1.15
SH3TC1-218ENST00000509553 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
SH3TC1-218ENST00000509553 RPGRIP1LQ68CZ1 1315 aa22.24■■□□□ 1.15
SH3TC1-218ENST00000509553 NRXN3Q9Y4C0 1643 aa22.24■■□□□ 1.15
SH3TC1-218ENST00000509553 NCKAP5LQ9HCH0 1330 aa22.23■■□□□ 1.15
SH3TC1-218ENST00000509553 MYOM2P54296 1465 aa22.22■■□□□ 1.15
SH3TC1-218ENST00000509553 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
SH3TC1-218ENST00000509553 EID1Q9Y6B2 187 aa22.2■■□□□ 1.14
SH3TC1-218ENST00000509553 SETD1AO15047 1707 aaKnown RBP22.2■■□□□ 1.14
SH3TC1-218ENST00000509553 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
SH3TC1-218ENST00000509553 ANKLE2Q86XL3 938 aa22.19■■□□□ 1.14
SH3TC1-218ENST00000509553 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
SH3TC1-218ENST00000509553 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
SH3TC1-218ENST00000509553 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.18■■□□□ 1.14
SH3TC1-218ENST00000509553 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
SH3TC1-218ENST00000509553 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
SH3TC1-218ENST00000509553 LTBP4Q8N2S1 1624 aa22.16■■□□□ 1.14
SH3TC1-218ENST00000509553 MED14O60244 1454 aa22.15■■□□□ 1.14
SH3TC1-218ENST00000509553 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
SH3TC1-218ENST00000509553 HDGFP51858 240 aaKnown RBP22.15■■□□□ 1.14
SH3TC1-218ENST00000509553 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
SH3TC1-218ENST00000509553 NPHP4O75161 1426 aaPredicted RBP22.14■■□□□ 1.14
SH3TC1-218ENST00000509553 PIK3C2GO75747 1445 aa22.14■■□□□ 1.14
SH3TC1-218ENST00000509553 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.13
SH3TC1-218ENST00000509553 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
SH3TC1-218ENST00000509553 KIAA1210Q9ULL0 1709 aa22.12■■□□□ 1.13
SH3TC1-218ENST00000509553 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
SH3TC1-218ENST00000509553 LAMC1P11047 1609 aa22.12■■□□□ 1.13
SH3TC1-218ENST00000509553 ADAMTS13Q76LX8 1427 aa22.12■■□□□ 1.13
SH3TC1-218ENST00000509553 CERKQ8TCT0 537 aa22.11■■□□□ 1.13
SH3TC1-218ENST00000509553 BCANQ96GW7 911 aa22.11■■□□□ 1.13
SH3TC1-218ENST00000509553 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
SH3TC1-218ENST00000509553 FBXO41Q8TF61 875 aa22.09■■□□□ 1.13
SH3TC1-218ENST00000509553 SLC26A8Q96RN1 970 aa22.09■■□□□ 1.13
SH3TC1-218ENST00000509553 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
SH3TC1-218ENST00000509553 DIP2AQ14689 1571 aa22.08■■□□□ 1.12
SH3TC1-218ENST00000509553 CFAP70Q5T0N1 1121 aa22.07■■□□□ 1.12
SH3TC1-218ENST00000509553 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
SH3TC1-218ENST00000509553 CHD2O14647 1828 aaKnown RBP22.07■■□□□ 1.12
SH3TC1-218ENST00000509553 STRCP1A6NGW2 1772 aa22.06■■□□□ 1.12
SH3TC1-218ENST00000509553 C14orf93Q9H972 538 aaKnown RBP22.04■■□□□ 1.12
SH3TC1-218ENST00000509553 ZNF335Q9H4Z2 1342 aaPredicted RBP22.04■■□□□ 1.12
SH3TC1-218ENST00000509553 ADGRB1O14514 1584 aa22.03■■□□□ 1.12
SH3TC1-218ENST00000509553 METP08581 1390 aa22.02■■□□□ 1.12
SH3TC1-218ENST00000509553 NBPF1Q3BBV0 1214 aa22.02■■□□□ 1.12
SH3TC1-218ENST00000509553 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
SH3TC1-218ENST00000509553 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
SH3TC1-218ENST00000509553 TBX22Q9Y458 520 aa22■■□□□ 1.11
SH3TC1-218ENST00000509553 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
SH3TC1-218ENST00000509553 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
SH3TC1-218ENST00000509553 KNDC1Q76NI1 1749 aa21.98■■□□□ 1.11
SH3TC1-218ENST00000509553 NWD1Q149M9 1564 aa21.96■■□□□ 1.11
SH3TC1-218ENST00000509553 ARHGEF28Q8N1W1 1705 aaKnown RBP21.96■■□□□ 1.11
SH3TC1-218ENST00000509553 ROCK2O75116 1388 aaKnown RBP21.95■■□□□ 1.1
SH3TC1-218ENST00000509553 YTHDC2Q9H6S0 1430 aaKnown RBP21.93■■□□□ 1.1
SH3TC1-218ENST00000509553 IQSEC2Q5JU85 1478 aa21.92■■□□□ 1.1
SH3TC1-218ENST00000509553 ZEB1P37275 1124 aaPredicted RBP21.92■■□□□ 1.1
SH3TC1-218ENST00000509553 STK26Q9P289 416 aa21.92■■□□□ 1.1
SH3TC1-218ENST00000509553 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
SH3TC1-218ENST00000509553 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
SH3TC1-218ENST00000509553 XIRP1Q702N8 1843 aaKnown RBP21.91■■□□□ 1.1
SH3TC1-218ENST00000509553 CPS1P31327 1500 aa21.9■■□□□ 1.1
SH3TC1-218ENST00000509553 LRPPRCP42704 1394 aaKnown RBP21.89■■□□□ 1.1
SH3TC1-218ENST00000509553 AMOTL2Q9Y2J4 779 aa21.89■■□□□ 1.09
SH3TC1-218ENST00000509553 KCNA6P17658 529 aa21.87■■□□□ 1.09
SH3TC1-218ENST00000509553 CARD11Q9BXL7 1154 aa21.87■■□□□ 1.09
SH3TC1-218ENST00000509553 TRAK1Q9UPV9 953 aa21.87■■□□□ 1.09
SH3TC1-218ENST00000509553 QRICH2Q9H0J4 1663 aa21.86■■□□□ 1.09
SH3TC1-218ENST00000509553 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
SH3TC1-218ENST00000509553 DLC1Q96QB1 1528 aa21.85■■□□□ 1.09
SH3TC1-218ENST00000509553 TECPR2O15040 1411 aa21.85■■□□□ 1.09
SH3TC1-218ENST00000509553 ABCC11Q96J66 1382 aa21.85■■□□□ 1.09
SH3TC1-218ENST00000509553 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.09
SH3TC1-218ENST00000509553 PLEKHH1Q9ULM0 1364 aa21.83■■□□□ 1.08
SH3TC1-218ENST00000509553 NALCNQ8IZF0 1738 aa21.83■■□□□ 1.08
SH3TC1-218ENST00000509553 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.08
SH3TC1-218ENST00000509553 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-218ENST00000509553 PTCH1Q13635 1447 aa21.81■■□□□ 1.08
SH3TC1-218ENST00000509553 WAPLQ7Z5K2 1190 aa21.81■■□□□ 1.08
SH3TC1-218ENST00000509553 USP47Q96K76 1375 aa21.79■■□□□ 1.08
SH3TC1-218ENST00000509553 LRRC7Q96NW7 1537 aa21.79■■□□□ 1.08
SH3TC1-218ENST00000509553 SAFB2Q14151 953 aaKnown RBP eCLIP21.78■■□□□ 1.08
SH3TC1-218ENST00000509553 PRAM1Q96QH2 718 aa21.78■■□□□ 1.08
SH3TC1-218ENST00000509553 PROSER2Q86WR7 435 aaPredicted RBP21.77■■□□□ 1.08
SH3TC1-218ENST00000509553 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
SH3TC1-218ENST00000509553 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
SH3TC1-218ENST00000509553 POGKQ9P215 609 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms