RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 JCADQ9P266 1359 aa16.03■□□□□ 0.16
COPS4-207ENST00000509317 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
COPS4-207ENST00000509317 LRP6O75581 1613 aa16.03■□□□□ 0.16
COPS4-207ENST00000509317 PHLPP1O60346 1717 aa16.02■□□□□ 0.16
COPS4-207ENST00000509317 ANKRD30AQ9BXX3 1397 aa16.02■□□□□ 0.16
COPS4-207ENST00000509317 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
COPS4-207ENST00000509317 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
COPS4-207ENST00000509317 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
COPS4-207ENST00000509317 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
COPS4-207ENST00000509317 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
COPS4-207ENST00000509317 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
COPS4-207ENST00000509317 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
COPS4-207ENST00000509317 SLC52A1Q9NWF4 448 aa15.99■□□□□ 0.15
COPS4-207ENST00000509317 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
COPS4-207ENST00000509317 CHGAP10645 457 aaKnown RBP15.98■□□□□ 0.15
COPS4-207ENST00000509317 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
COPS4-207ENST00000509317 APLP2Q06481 763 aa15.96■□□□□ 0.15
COPS4-207ENST00000509317 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
COPS4-207ENST00000509317 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
COPS4-207ENST00000509317 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
COPS4-207ENST00000509317 NUTM2BA6NNL0 878 aaPredicted RBP15.94■□□□□ 0.14
COPS4-207ENST00000509317 NUTM2EB1AL46 878 aaPredicted RBP15.94■□□□□ 0.14
COPS4-207ENST00000509317 NUTM2AQ8IVF1 878 aaPredicted RBP15.94■□□□□ 0.14
COPS4-207ENST00000509317 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
COPS4-207ENST00000509317 CHD2O14647 1828 aaKnown RBP15.94■□□□□ 0.14
COPS4-207ENST00000509317 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
COPS4-207ENST00000509317 TBX22Q9Y458 520 aa15.93■□□□□ 0.14
COPS4-207ENST00000509317 TMEM131LA2VDJ0 1609 aa15.93■□□□□ 0.14
COPS4-207ENST00000509317 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
COPS4-207ENST00000509317 ADGRL2O95490 1459 aa15.92■□□□□ 0.14
COPS4-207ENST00000509317 SRCAPQ6ZRS2 3230 aa15.92■□□□□ 0.14
COPS4-207ENST00000509317 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
COPS4-207ENST00000509317 ATF3P18847 181 aa15.91■□□□□ 0.14
COPS4-207ENST00000509317 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
COPS4-207ENST00000509317 ZNF772Q68DY9 489 aaPredicted RBP15.9■□□□□ 0.14
COPS4-207ENST00000509317 BRINP3Q76B58 766 aa15.9■□□□□ 0.14
COPS4-207ENST00000509317 C19orf44Q9H6X5 657 aa15.9■□□□□ 0.14
COPS4-207ENST00000509317 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
COPS4-207ENST00000509317 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.89■□□□□ 0.13
COPS4-207ENST00000509317 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
COPS4-207ENST00000509317 AHDC1Q5TGY3 1603 aaPredicted RBP15.89■□□□□ 0.13
COPS4-207ENST00000509317 HDGFP51858 240 aaKnown RBP15.88■□□□□ 0.13
COPS4-207ENST00000509317 DDX17Q92841 729 aaKnown RBP15.88■□□□□ 0.13
COPS4-207ENST00000509317 AMOTL2Q9Y2J4 779 aa15.88■□□□□ 0.13
COPS4-207ENST00000509317 RXRBP28702 533 aa15.87■□□□□ 0.13
COPS4-207ENST00000509317 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.87■□□□□ 0.13
COPS4-207ENST00000509317 NCOA3Q9Y6Q9 1424 aa15.86■□□□□ 0.13
COPS4-207ENST00000509317 DIP2AQ14689 1571 aa15.86■□□□□ 0.13
COPS4-207ENST00000509317 AFF2P51816 1311 aa15.86■□□□□ 0.13
COPS4-207ENST00000509317 SHPRHQ149N8 1683 aa15.85■□□□□ 0.13
COPS4-207ENST00000509317 E9PCH4 1651 aa15.83■□□□□ 0.13
COPS4-207ENST00000509317 ASXL1Q8IXJ9 1541 aa15.82■□□□□ 0.12
COPS4-207ENST00000509317 UNC13BO14795 1591 aa15.82■□□□□ 0.12
COPS4-207ENST00000509317 C8orf37Q96NL8 207 aa15.81■□□□□ 0.12
COPS4-207ENST00000509317 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
COPS4-207ENST00000509317 TRPM2O94759 1503 aa15.8■□□□□ 0.12
COPS4-207ENST00000509317 RGS12O14924 1447 aa15.8■□□□□ 0.12
COPS4-207ENST00000509317 MST1RQ04912 1400 aa15.8■□□□□ 0.12
COPS4-207ENST00000509317 METP08581 1390 aa15.79■□□□□ 0.12
COPS4-207ENST00000509317 NUP155O75694 1391 aa15.78■□□□□ 0.12
COPS4-207ENST00000509317 ITGAEP38570 1179 aa15.78■□□□□ 0.12
COPS4-207ENST00000509317 QTRT2Q9H974 415 aaKnown RBP15.78■□□□□ 0.12
COPS4-207ENST00000509317 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
COPS4-207ENST00000509317 NRXN3Q9Y4C0 1643 aa15.77■□□□□ 0.12
COPS4-207ENST00000509317 ADAMTS2O95450 1211 aa15.77■□□□□ 0.12
COPS4-207ENST00000509317 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.11
COPS4-207ENST00000509317 PNPLA6Q8IY17 1366 aa15.76■□□□□ 0.11
COPS4-207ENST00000509317 XRN1Q8IZH2 1706 aaKnown RBP15.76■□□□□ 0.11
COPS4-207ENST00000509317 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
COPS4-207ENST00000509317 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
COPS4-207ENST00000509317 DCCP43146 1447 aa15.75■□□□□ 0.11
COPS4-207ENST00000509317 IQGAP3Q86VI3 1631 aa15.75■□□□□ 0.11
COPS4-207ENST00000509317 NHSL1Q5SYE7 1610 aa15.73■□□□□ 0.11
COPS4-207ENST00000509317 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
COPS4-207ENST00000509317 SETBP1Q9Y6X0 1596 aa15.72■□□□□ 0.11
COPS4-207ENST00000509317 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
COPS4-207ENST00000509317 ADGRL3Q9HAR2 1447 aa15.71■□□□□ 0.11
COPS4-207ENST00000509317 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
COPS4-207ENST00000509317 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
COPS4-207ENST00000509317 ORAI2Q96SN7 254 aa15.7■□□□□ 0.1
COPS4-207ENST00000509317 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
COPS4-207ENST00000509317 C1orf167Q5SNV9 1468 aa15.68■□□□□ 0.1
COPS4-207ENST00000509317 EP400Q96L91 3159 aa15.67■□□□□ 0.1
COPS4-207ENST00000509317 ROBO2Q9HCK4 1378 aa15.66■□□□□ 0.1
COPS4-207ENST00000509317 USP21Q9UK80 565 aa15.66■□□□□ 0.1
COPS4-207ENST00000509317 NEXMIFQ5QGS0 1516 aa15.65■□□□□ 0.1
COPS4-207ENST00000509317 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
COPS4-207ENST00000509317 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
COPS4-207ENST00000509317 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
COPS4-207ENST00000509317 SOS2Q07890 1332 aaPredicted RBP15.63■□□□□ 0.09
COPS4-207ENST00000509317 XPCQ01831 940 aaPredicted RBP15.62■□□□□ 0.09
COPS4-207ENST00000509317 TRPC5Q9UL62 973 aaPredicted RBP15.61■□□□□ 0.09
COPS4-207ENST00000509317 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
COPS4-207ENST00000509317 ATRNO75882 1429 aa15.6■□□□□ 0.09
COPS4-207ENST00000509317 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
COPS4-207ENST00000509317 LAMC1P11047 1609 aa15.57■□□□□ 0.08
COPS4-207ENST00000509317 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
COPS4-207ENST00000509317 ESCO1Q5FWF5 840 aa15.57■□□□□ 0.08
COPS4-207ENST00000509317 ZRANB1Q9UGI0 708 aa15.57■□□□□ 0.08
COPS4-207ENST00000509317 MYOM2P54296 1465 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms