RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
TUSC3-208ENST00000509177 NKTRP30414 1462 aaKnown RBP16.55■□□□□ 0.24
TUSC3-208ENST00000509177 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
TUSC3-208ENST00000509177 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
TUSC3-208ENST00000509177 SLC52A1Q9NWF4 448 aa16.53■□□□□ 0.24
TUSC3-208ENST00000509177 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
TUSC3-208ENST00000509177 MSH6P52701 1360 aa16.51■□□□□ 0.23
TUSC3-208ENST00000509177 FOXD1Q16676 465 aa16.51■□□□□ 0.23
TUSC3-208ENST00000509177 BCANQ96GW7 911 aa16.51■□□□□ 0.23
TUSC3-208ENST00000509177 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
TUSC3-208ENST00000509177 PHLPP1O60346 1717 aa16.49■□□□□ 0.23
TUSC3-208ENST00000509177 ROCK1Q13464 1354 aa16.48■□□□□ 0.23
TUSC3-208ENST00000509177 JCADQ9P266 1359 aa16.48■□□□□ 0.23
TUSC3-208ENST00000509177 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
TUSC3-208ENST00000509177 RPRD2Q5VT52 1461 aaKnown RBP16.48■□□□□ 0.23
TUSC3-208ENST00000509177 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
TUSC3-208ENST00000509177 MYO5BQ9ULV0 1848 aa16.47■□□□□ 0.23
TUSC3-208ENST00000509177 SETD1AO15047 1707 aaKnown RBP16.47■□□□□ 0.23
TUSC3-208ENST00000509177 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
TUSC3-208ENST00000509177 TMEM131LA2VDJ0 1609 aa16.45■□□□□ 0.22
TUSC3-208ENST00000509177 COL16A1Q07092 1604 aaPredicted RBP16.45■□□□□ 0.22
TUSC3-208ENST00000509177 GCC2Q8IWJ2 1684 aa16.44■□□□□ 0.22
TUSC3-208ENST00000509177 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
TUSC3-208ENST00000509177 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
TUSC3-208ENST00000509177 LRP6O75581 1613 aa16.42■□□□□ 0.22
TUSC3-208ENST00000509177 NCOA3Q9Y6Q9 1424 aa16.42■□□□□ 0.22
TUSC3-208ENST00000509177 NUP155O75694 1391 aa16.41■□□□□ 0.22
TUSC3-208ENST00000509177 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
TUSC3-208ENST00000509177 ADAMTS13Q76LX8 1427 aa16.41■□□□□ 0.22
TUSC3-208ENST00000509177 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
TUSC3-208ENST00000509177 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
TUSC3-208ENST00000509177 SPATA31A6Q5VVP1 1343 aa16.39■□□□□ 0.21
TUSC3-208ENST00000509177 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
TUSC3-208ENST00000509177 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
TUSC3-208ENST00000509177 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
TUSC3-208ENST00000509177 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
TUSC3-208ENST00000509177 CADPS2Q86UW7 1296 aa16.37■□□□□ 0.21
TUSC3-208ENST00000509177 C19orf44Q9H6X5 657 aa16.37■□□□□ 0.21
TUSC3-208ENST00000509177 UNC13BO14795 1591 aa16.37■□□□□ 0.21
TUSC3-208ENST00000509177 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
TUSC3-208ENST00000509177 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
TUSC3-208ENST00000509177 E9PCH4 1651 aa16.36■□□□□ 0.21
TUSC3-208ENST00000509177 ATF3P18847 181 aa16.35■□□□□ 0.21
TUSC3-208ENST00000509177 MEX3CQ5U5Q3 659 aaKnown RBP16.35■□□□□ 0.21
TUSC3-208ENST00000509177 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
TUSC3-208ENST00000509177 PIK3R4Q99570 1358 aa16.35■□□□□ 0.21
TUSC3-208ENST00000509177 SHPRHQ149N8 1683 aa16.34■□□□□ 0.21
TUSC3-208ENST00000509177 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
TUSC3-208ENST00000509177 TRIM52Q96A61 297 aa16.33■□□□□ 0.2
TUSC3-208ENST00000509177 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
TUSC3-208ENST00000509177 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
TUSC3-208ENST00000509177 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
TUSC3-208ENST00000509177 TRPM2O94759 1503 aa16.31■□□□□ 0.2
TUSC3-208ENST00000509177 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
TUSC3-208ENST00000509177 NRXN3Q9Y4C0 1643 aa16.28■□□□□ 0.2
TUSC3-208ENST00000509177 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
TUSC3-208ENST00000509177 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
TUSC3-208ENST00000509177 RXRBP28702 533 aa16.28■□□□□ 0.2
TUSC3-208ENST00000509177 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
TUSC3-208ENST00000509177 DCCP43146 1447 aa16.28■□□□□ 0.2
TUSC3-208ENST00000509177 NAIPQ13075 1403 aa16.28■□□□□ 0.2
TUSC3-208ENST00000509177 ASXL1Q8IXJ9 1541 aa16.27■□□□□ 0.2
TUSC3-208ENST00000509177 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
TUSC3-208ENST00000509177 XRN1Q8IZH2 1706 aaKnown RBP16.26■□□□□ 0.19
TUSC3-208ENST00000509177 MST1RQ04912 1400 aa16.26■□□□□ 0.19
TUSC3-208ENST00000509177 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
TUSC3-208ENST00000509177 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
TUSC3-208ENST00000509177 AFF2P51816 1311 aa16.24■□□□□ 0.19
TUSC3-208ENST00000509177 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
TUSC3-208ENST00000509177 SETBP1Q9Y6X0 1596 aa16.24■□□□□ 0.19
TUSC3-208ENST00000509177 METP08581 1390 aa16.24■□□□□ 0.19
TUSC3-208ENST00000509177 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
TUSC3-208ENST00000509177 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
TUSC3-208ENST00000509177 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
TUSC3-208ENST00000509177 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
TUSC3-208ENST00000509177 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
TUSC3-208ENST00000509177 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
TUSC3-208ENST00000509177 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
TUSC3-208ENST00000509177 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
TUSC3-208ENST00000509177 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
TUSC3-208ENST00000509177 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
TUSC3-208ENST00000509177 RGS12O14924 1447 aa16.18■□□□□ 0.18
TUSC3-208ENST00000509177 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
TUSC3-208ENST00000509177 NEXMIFQ5QGS0 1516 aa16.16■□□□□ 0.18
TUSC3-208ENST00000509177 RBM6P78332 1123 aaKnown RBP16.15■□□□□ 0.18
TUSC3-208ENST00000509177 CLTCL1P53675 1640 aa16.14■□□□□ 0.17
TUSC3-208ENST00000509177 C1orf167Q5SNV9 1468 aa16.13■□□□□ 0.17
TUSC3-208ENST00000509177 ADAMTS2O95450 1211 aa16.12■□□□□ 0.17
TUSC3-208ENST00000509177 LAMC1P11047 1609 aa16.12■□□□□ 0.17
TUSC3-208ENST00000509177 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
TUSC3-208ENST00000509177 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
TUSC3-208ENST00000509177 MPHOSPH9Q99550 1183 aa16.1■□□□□ 0.17
TUSC3-208ENST00000509177 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
TUSC3-208ENST00000509177 PTCH1Q13635 1447 aa16.1■□□□□ 0.17
TUSC3-208ENST00000509177 EP400Q96L91 3159 aa16.09■□□□□ 0.17
TUSC3-208ENST00000509177 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
TUSC3-208ENST00000509177 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
TUSC3-208ENST00000509177 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
TUSC3-208ENST00000509177 KIF1BO60333 1816 aa16.06■□□□□ 0.16
TUSC3-208ENST00000509177 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms