RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
HTT-205ENST00000509043 AGLP35573 1532 aa12.62□□□□□ -0.39
HTT-205ENST00000509043 FAM69CQ0P6D2 419 aa12.61□□□□□ -0.39
HTT-205ENST00000509043 GGT6Q6P531 493 aa12.61□□□□□ -0.39
HTT-205ENST00000509043 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
HTT-205ENST00000509043 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
HTT-205ENST00000509043 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
HTT-205ENST00000509043 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
HTT-205ENST00000509043 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
HTT-205ENST00000509043 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
HTT-205ENST00000509043 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
HTT-205ENST00000509043 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
HTT-205ENST00000509043 UGGT1Q9NYU2 1555 aa12.58□□□□□ -0.4
HTT-205ENST00000509043 ZBED9Q6R2W3 1325 aa12.58□□□□□ -0.4
HTT-205ENST00000509043 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
HTT-205ENST00000509043 MROH2AA6NES4 1674 aa12.57□□□□□ -0.4
HTT-205ENST00000509043 INSRP06213 1382 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 SYNMO15061 1565 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 PPLO60437 1756 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 YEATS2Q9ULM3 1422 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 MYO3AQ8NEV4 1616 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 NEFLP07196 543 aa12.56□□□□□ -0.4
HTT-205ENST00000509043 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
HTT-205ENST00000509043 PER1O15534 1290 aaPredicted RBP12.55□□□□□ -0.4
HTT-205ENST00000509043 PLPPR3Q6T4P5 718 aa12.55□□□□□ -0.4
HTT-205ENST00000509043 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
HTT-205ENST00000509043 NLRP13Q86W25 1043 aa12.54□□□□□ -0.4
HTT-205ENST00000509043 TMC1Q8TDI8 760 aa12.54□□□□□ -0.4
HTT-205ENST00000509043 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
HTT-205ENST00000509043 C14orf93Q9H972 538 aaKnown RBP12.53□□□□□ -0.4
HTT-205ENST00000509043 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
HTT-205ENST00000509043 ADGRF5Q8IZF2 1346 aa12.53□□□□□ -0.4
HTT-205ENST00000509043 CCDC184Q52MB2 194 aa12.52□□□□□ -0.41
HTT-205ENST00000509043 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
HTT-205ENST00000509043 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.41
HTT-205ENST00000509043 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
HTT-205ENST00000509043 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
HTT-205ENST00000509043 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
HTT-205ENST00000509043 PNISRQ8TF01 805 aaKnown RBP12.51□□□□□ -0.41
HTT-205ENST00000509043 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
HTT-205ENST00000509043 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
HTT-205ENST00000509043 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
HTT-205ENST00000509043 CFAP70Q5T0N1 1121 aa12.5□□□□□ -0.41
HTT-205ENST00000509043 NEXMIFQ5QGS0 1516 aa12.5□□□□□ -0.41
HTT-205ENST00000509043 ADGRB1O14514 1584 aa12.5□□□□□ -0.41
HTT-205ENST00000509043 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
HTT-205ENST00000509043 PANK3Q9H999 370 aa12.49□□□□□ -0.41
HTT-205ENST00000509043 CENPJQ9HC77 1338 aaPredicted RBP12.48□□□□□ -0.41
HTT-205ENST00000509043 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
HTT-205ENST00000509043 KIF13AQ9H1H9 1805 aa12.48□□□□□ -0.41
HTT-205ENST00000509043 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
HTT-205ENST00000509043 ASXL1Q8IXJ9 1541 aa12.47□□□□□ -0.41
HTT-205ENST00000509043 IDI1Q13907 227 aa12.46□□□□□ -0.41
HTT-205ENST00000509043 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.41
HTT-205ENST00000509043 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
HTT-205ENST00000509043 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
HTT-205ENST00000509043 SPATA31D1Q6ZQQ2 1576 aa12.45□□□□□ -0.42
HTT-205ENST00000509043 MYOM1P52179 1685 aa12.45□□□□□ -0.42
HTT-205ENST00000509043 FKBP8Q14318 412 aa12.43□□□□□ -0.42
HTT-205ENST00000509043 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
HTT-205ENST00000509043 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
HTT-205ENST00000509043 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
HTT-205ENST00000509043 QRICH2Q9H0J4 1663 aa12.42□□□□□ -0.42
HTT-205ENST00000509043 CFAP65Q6ZU64 1925 aaKnown RBP12.41□□□□□ -0.42
HTT-205ENST00000509043 CLTCQ00610 1675 aaKnown RBP12.4□□□□□ -0.42
HTT-205ENST00000509043 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
HTT-205ENST00000509043 BLMP54132 1417 aaPredicted RBP12.39□□□□□ -0.43
HTT-205ENST00000509043 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
HTT-205ENST00000509043 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
HTT-205ENST00000509043 NUDCQ9Y266 331 aa12.39□□□□□ -0.43
HTT-205ENST00000509043 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
HTT-205ENST00000509043 USP32Q8NFA0 1604 aa12.38□□□□□ -0.43
HTT-205ENST00000509043 HDGFP51858 240 aaKnown RBP12.38□□□□□ -0.43
HTT-205ENST00000509043 TRAK1Q9UPV9 953 aa12.38□□□□□ -0.43
HTT-205ENST00000509043 PPP2R1AP30153 589 aa12.37□□□□□ -0.43
HTT-205ENST00000509043 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
HTT-205ENST00000509043 A2ML1A8K2U0 1454 aa12.37□□□□□ -0.43
HTT-205ENST00000509043 NSD2O96028 1365 aa12.36□□□□□ -0.43
HTT-205ENST00000509043 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
HTT-205ENST00000509043 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
HTT-205ENST00000509043 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
HTT-205ENST00000509043 DLC1Q96QB1 1528 aa12.36□□□□□ -0.43
HTT-205ENST00000509043 ZMYM3Q14202 1370 aa12.34□□□□□ -0.43
HTT-205ENST00000509043 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
HTT-205ENST00000509043 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
HTT-205ENST00000509043 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
HTT-205ENST00000509043 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
HTT-205ENST00000509043 MYO5BQ9ULV0 1848 aa12.34□□□□□ -0.43
HTT-205ENST00000509043 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
HTT-205ENST00000509043 ATAD2Q6PL18 1390 aa12.33□□□□□ -0.44
HTT-205ENST00000509043 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.44
HTT-205ENST00000509043 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.44
HTT-205ENST00000509043 PTPRMP28827 1452 aa12.33□□□□□ -0.44
HTT-205ENST00000509043 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
HTT-205ENST00000509043 ANKRD36BQ8N2N9 1353 aa12.32□□□□□ -0.44
HTT-205ENST00000509043 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
HTT-205ENST00000509043 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
HTT-205ENST00000509043 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms