RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ALKQ9UM73 1620 aa20.66■□□□□ 0.9
CCHCR1-227ENST00000508852 MYO5BQ9ULV0 1848 aa20.66■□□□□ 0.9
CCHCR1-227ENST00000508852 XIRP1Q702N8 1843 aaKnown RBP20.65■□□□□ 0.9
CCHCR1-227ENST00000508852 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
CCHCR1-227ENST00000508852 ZFYVE9O95405 1425 aa20.65■□□□□ 0.9
CCHCR1-227ENST00000508852 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
CCHCR1-227ENST00000508852 RRBP1Q9P2E9 1410 aaKnown RBP20.64■□□□□ 0.89
CCHCR1-227ENST00000508852 SLC26A8Q96RN1 970 aa20.64■□□□□ 0.89
CCHCR1-227ENST00000508852 NWD1Q149M9 1564 aa20.63■□□□□ 0.89
CCHCR1-227ENST00000508852 PROSER2Q86WR7 435 aaPredicted RBP20.62■□□□□ 0.89
CCHCR1-227ENST00000508852 SOCS7O14512 581 aa20.61■□□□□ 0.89
CCHCR1-227ENST00000508852 CHGAP10645 457 aaKnown RBP20.61■□□□□ 0.89
CCHCR1-227ENST00000508852 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
CCHCR1-227ENST00000508852 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
CCHCR1-227ENST00000508852 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
CCHCR1-227ENST00000508852 TBX22Q9Y458 520 aa20.6■□□□□ 0.89
CCHCR1-227ENST00000508852 CHD2O14647 1828 aaKnown RBP20.6■□□□□ 0.89
CCHCR1-227ENST00000508852 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
CCHCR1-227ENST00000508852 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.88
CCHCR1-227ENST00000508852 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.88
CCHCR1-227ENST00000508852 SPHKAPQ2M3C7 1700 aa20.58■□□□□ 0.88
CCHCR1-227ENST00000508852 PIK3R4Q99570 1358 aa20.58■□□□□ 0.88
CCHCR1-227ENST00000508852 NCOA3Q9Y6Q9 1424 aa20.57■□□□□ 0.88
CCHCR1-227ENST00000508852 MSH6P52701 1360 aa20.56■□□□□ 0.88
CCHCR1-227ENST00000508852 NAIPQ13075 1403 aa20.52■□□□□ 0.87
CCHCR1-227ENST00000508852 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-227ENST00000508852 TRPM2O94759 1503 aa20.51■□□□□ 0.87
CCHCR1-227ENST00000508852 HFM1A2PYH4 1435 aa20.49■□□□□ 0.87
CCHCR1-227ENST00000508852 ADAMTS13Q76LX8 1427 aa20.48■□□□□ 0.87
CCHCR1-227ENST00000508852 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
CCHCR1-227ENST00000508852 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
CCHCR1-227ENST00000508852 KIF1BO60333 1816 aa20.47■□□□□ 0.87
CCHCR1-227ENST00000508852 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
CCHCR1-227ENST00000508852 SETBP1Q9Y6X0 1596 aa20.45■□□□□ 0.86
CCHCR1-227ENST00000508852 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
CCHCR1-227ENST00000508852 NUTM2DQ5VT03 806 aaPredicted RBP20.44■□□□□ 0.86
CCHCR1-227ENST00000508852 C14orf37Q86TY3 774 aa20.44■□□□□ 0.86
CCHCR1-227ENST00000508852 CADPS2Q86UW7 1296 aa20.44■□□□□ 0.86
CCHCR1-227ENST00000508852 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
CCHCR1-227ENST00000508852 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
CCHCR1-227ENST00000508852 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
CCHCR1-227ENST00000508852 RBM33Q96EV2 1170 aaKnown RBP20.42■□□□□ 0.86
CCHCR1-227ENST00000508852 ATF3P18847 181 aa20.41■□□□□ 0.86
CCHCR1-227ENST00000508852 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
CCHCR1-227ENST00000508852 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
CCHCR1-227ENST00000508852 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-227ENST00000508852 RPGRIP1LQ68CZ1 1315 aa20.38■□□□□ 0.85
CCHCR1-227ENST00000508852 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-227ENST00000508852 PHLPP1O60346 1717 aa20.38■□□□□ 0.85
CCHCR1-227ENST00000508852 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
CCHCR1-227ENST00000508852 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
CCHCR1-227ENST00000508852 NEXMIFQ5QGS0 1516 aa20.37■□□□□ 0.85
CCHCR1-227ENST00000508852 DCCP43146 1447 aa20.37■□□□□ 0.85
CCHCR1-227ENST00000508852 XRN1Q8IZH2 1706 aaKnown RBP20.36■□□□□ 0.85
CCHCR1-227ENST00000508852 JCADQ9P266 1359 aa20.34■□□□□ 0.85
CCHCR1-227ENST00000508852 PTPRUQ92729 1446 aa20.33■□□□□ 0.84
CCHCR1-227ENST00000508852 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
CCHCR1-227ENST00000508852 METP08581 1390 aa20.29■□□□□ 0.84
CCHCR1-227ENST00000508852 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.84
CCHCR1-227ENST00000508852 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.84
CCHCR1-227ENST00000508852 PPLO60437 1756 aa20.26■□□□□ 0.83
CCHCR1-227ENST00000508852 CCDC144AA2RUR9 1427 aa20.26■□□□□ 0.83
CCHCR1-227ENST00000508852 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
CCHCR1-227ENST00000508852 ADGRL3Q9HAR2 1447 aa20.25■□□□□ 0.83
CCHCR1-227ENST00000508852 SHPRHQ149N8 1683 aa20.23■□□□□ 0.83
CCHCR1-227ENST00000508852 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
CCHCR1-227ENST00000508852 MPHOSPH9Q99550 1183 aa20.23■□□□□ 0.83
CCHCR1-227ENST00000508852 BRINP3Q76B58 766 aa20.22■□□□□ 0.83
CCHCR1-227ENST00000508852 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
CCHCR1-227ENST00000508852 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
CCHCR1-227ENST00000508852 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
CCHCR1-227ENST00000508852 MST1RQ04912 1400 aa20.2■□□□□ 0.82
CCHCR1-227ENST00000508852 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
CCHCR1-227ENST00000508852 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
CCHCR1-227ENST00000508852 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
CCHCR1-227ENST00000508852 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
CCHCR1-227ENST00000508852 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
CCHCR1-227ENST00000508852 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
CCHCR1-227ENST00000508852 FOXD1Q16676 465 aa20.15■□□□□ 0.82
CCHCR1-227ENST00000508852 ZNF772Q68DY9 489 aaPredicted RBP20.15■□□□□ 0.82
CCHCR1-227ENST00000508852 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
CCHCR1-227ENST00000508852 IFT172Q9UG01 1749 aa20.14■□□□□ 0.81
CCHCR1-227ENST00000508852 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
CCHCR1-227ENST00000508852 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
CCHCR1-227ENST00000508852 POTEAQ6S8J7 498 aa20.12■□□□□ 0.81
CCHCR1-227ENST00000508852 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
CCHCR1-227ENST00000508852 LAMC1P11047 1609 aa20.1■□□□□ 0.81
CCHCR1-227ENST00000508852 ADGRF5Q8IZF2 1346 aa20.09■□□□□ 0.81
CCHCR1-227ENST00000508852 TECPR2O15040 1411 aa20.09■□□□□ 0.81
CCHCR1-227ENST00000508852 LRP6O75581 1613 aa20.09■□□□□ 0.81
CCHCR1-227ENST00000508852 CDC42BPGQ6DT37 1551 aa20.08■□□□□ 0.8
CCHCR1-227ENST00000508852 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
CCHCR1-227ENST00000508852 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
CCHCR1-227ENST00000508852 PIK3C2GO75747 1445 aa20.07■□□□□ 0.8
CCHCR1-227ENST00000508852 ABCC11Q96J66 1382 aa20.07■□□□□ 0.8
CCHCR1-227ENST00000508852 HRCP23327 699 aa20.05■□□□□ 0.8
CCHCR1-227ENST00000508852 SIRT1Q96EB6 747 aa20.05■□□□□ 0.8
CCHCR1-227ENST00000508852 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
CCHCR1-227ENST00000508852 NUTM2BA6NNL0 878 aaPredicted RBP20.04■□□□□ 0.8
CCHCR1-227ENST00000508852 NUTM2EB1AL46 878 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms