RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ZFYVE9O95405 1425 aa15.72■□□□□ 0.11
POLR2J3-213ENST00000508848 KIF1BO60333 1816 aa15.72■□□□□ 0.11
POLR2J3-213ENST00000508848 IQGAP1P46940 1657 aa15.71■□□□□ 0.11
POLR2J3-213ENST00000508848 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
POLR2J3-213ENST00000508848 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
POLR2J3-213ENST00000508848 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
POLR2J3-213ENST00000508848 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
POLR2J3-213ENST00000508848 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-213ENST00000508848 CLTCL1P53675 1640 aa15.67■□□□□ 0.1
POLR2J3-213ENST00000508848 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
POLR2J3-213ENST00000508848 CERKQ8TCT0 537 aa15.66■□□□□ 0.1
POLR2J3-213ENST00000508848 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
POLR2J3-213ENST00000508848 CPS1P31327 1500 aa15.64■□□□□ 0.09
POLR2J3-213ENST00000508848 CCDC144AA2RUR9 1427 aa15.63■□□□□ 0.09
POLR2J3-213ENST00000508848 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
POLR2J3-213ENST00000508848 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
POLR2J3-213ENST00000508848 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
POLR2J3-213ENST00000508848 STAC3Q96MF2 364 aa15.62■□□□□ 0.09
POLR2J3-213ENST00000508848 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
POLR2J3-213ENST00000508848 ZNF335Q9H4Z2 1342 aaPredicted RBP15.61■□□□□ 0.09
POLR2J3-213ENST00000508848 DIP2AQ14689 1571 aa15.61■□□□□ 0.09
POLR2J3-213ENST00000508848 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
POLR2J3-213ENST00000508848 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
POLR2J3-213ENST00000508848 KCNA6P17658 529 aa15.59■□□□□ 0.09
POLR2J3-213ENST00000508848 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-213ENST00000508848 NEXMIFQ5QGS0 1516 aa15.58■□□□□ 0.09
POLR2J3-213ENST00000508848 SETBP1Q9Y6X0 1596 aa15.58■□□□□ 0.09
POLR2J3-213ENST00000508848 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
POLR2J3-213ENST00000508848 PPLO60437 1756 aa15.57■□□□□ 0.08
POLR2J3-213ENST00000508848 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
POLR2J3-213ENST00000508848 ADAMTS13Q76LX8 1427 aa15.57■□□□□ 0.08
POLR2J3-213ENST00000508848 STRCP1A6NGW2 1772 aa15.56■□□□□ 0.08
POLR2J3-213ENST00000508848 NCOA3Q9Y6Q9 1424 aa15.54■□□□□ 0.08
POLR2J3-213ENST00000508848 SLC26A8Q96RN1 970 aa15.54■□□□□ 0.08
POLR2J3-213ENST00000508848 IFT172Q9UG01 1749 aa15.54■□□□□ 0.08
POLR2J3-213ENST00000508848 NWD1Q149M9 1564 aa15.53■□□□□ 0.08
POLR2J3-213ENST00000508848 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.08
POLR2J3-213ENST00000508848 NRXN3Q9Y4C0 1643 aa15.52■□□□□ 0.08
POLR2J3-213ENST00000508848 LRRC7Q96NW7 1537 aa15.52■□□□□ 0.07
POLR2J3-213ENST00000508848 BCANQ96GW7 911 aa15.51■□□□□ 0.07
POLR2J3-213ENST00000508848 PRAG1Q86YV5 1406 aa15.5■□□□□ 0.07
POLR2J3-213ENST00000508848 RGL3Q3MIN7 710 aa15.48■□□□□ 0.07
POLR2J3-213ENST00000508848 NUTM2DQ5VT03 806 aaPredicted RBP15.48■□□□□ 0.07
POLR2J3-213ENST00000508848 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
POLR2J3-213ENST00000508848 MYOM2P54296 1465 aa15.47■□□□□ 0.07
POLR2J3-213ENST00000508848 NRXN1Q9ULB1 1477 aa15.47■□□□□ 0.07
POLR2J3-213ENST00000508848 ALKQ9UM73 1620 aa15.46■□□□□ 0.07
POLR2J3-213ENST00000508848 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.07
POLR2J3-213ENST00000508848 TOM1O60784 492 aa15.46■□□□□ 0.07
POLR2J3-213ENST00000508848 PROSER2Q86WR7 435 aaPredicted RBP15.46■□□□□ 0.07
POLR2J3-213ENST00000508848 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-213ENST00000508848 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
POLR2J3-213ENST00000508848 ADGRF5Q8IZF2 1346 aa15.44■□□□□ 0.06
POLR2J3-213ENST00000508848 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
POLR2J3-213ENST00000508848 XRN1Q8IZH2 1706 aaKnown RBP15.44■□□□□ 0.06
POLR2J3-213ENST00000508848 C14orf93Q9H972 538 aaKnown RBP15.44■□□□□ 0.06
POLR2J3-213ENST00000508848 METP08581 1390 aa15.44■□□□□ 0.06
POLR2J3-213ENST00000508848 SIRT1Q96EB6 747 aa15.43■□□□□ 0.06
POLR2J3-213ENST00000508848 LAMC1P11047 1609 aa15.43■□□□□ 0.06
POLR2J3-213ENST00000508848 PTPRUQ92729 1446 aa15.43■□□□□ 0.06
POLR2J3-213ENST00000508848 TMEM94Q12767 1356 aa15.42■□□□□ 0.06
POLR2J3-213ENST00000508848 DHX57Q6P158 1386 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-213ENST00000508848 UBAP1LF5GYI3 381 aa15.41■□□□□ 0.06
POLR2J3-213ENST00000508848 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
POLR2J3-213ENST00000508848 ABCC11Q96J66 1382 aa15.4■□□□□ 0.06
POLR2J3-213ENST00000508848 PTCH1Q13635 1447 aa15.39■□□□□ 0.05
POLR2J3-213ENST00000508848 TECPR2O15040 1411 aa15.38■□□□□ 0.05
POLR2J3-213ENST00000508848 DCCP43146 1447 aa15.38■□□□□ 0.05
POLR2J3-213ENST00000508848 DCAF11Q8TEB1 546 aa15.38■□□□□ 0.05
POLR2J3-213ENST00000508848 MSH6P52701 1360 aa15.37■□□□□ 0.05
POLR2J3-213ENST00000508848 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
POLR2J3-213ENST00000508848 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
POLR2J3-213ENST00000508848 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
POLR2J3-213ENST00000508848 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
POLR2J3-213ENST00000508848 FAM135BQ49AJ0 1406 aa15.35■□□□□ 0.05
POLR2J3-213ENST00000508848 KNDC1Q76NI1 1749 aa15.35■□□□□ 0.05
POLR2J3-213ENST00000508848 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.34■□□□□ 0.05
POLR2J3-213ENST00000508848 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
POLR2J3-213ENST00000508848 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
POLR2J3-213ENST00000508848 YTHDC2Q9H6S0 1430 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-213ENST00000508848 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
POLR2J3-213ENST00000508848 ROBO2Q9HCK4 1378 aa15.31■□□□□ 0.04
POLR2J3-213ENST00000508848 ADGRL3Q9HAR2 1447 aa15.31■□□□□ 0.04
POLR2J3-213ENST00000508848 ADGRB1O14514 1584 aa15.31■□□□□ 0.04
POLR2J3-213ENST00000508848 ATF3P18847 181 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 SIN3AQ96ST3 1273 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 TIMELESSQ9UNS1 1208 aa15.3■□□□□ 0.04
POLR2J3-213ENST00000508848 TMEM132EQ6IEE7 984 aa15.29■□□□□ 0.04
POLR2J3-213ENST00000508848 C14orf37Q86TY3 774 aa15.27■□□□□ 0.04
POLR2J3-213ENST00000508848 RBM33Q96EV2 1170 aaKnown RBP15.27■□□□□ 0.04
POLR2J3-213ENST00000508848 NALCNQ8IZF0 1738 aa15.26■□□□□ 0.03
POLR2J3-213ENST00000508848 PIP4K2BP78356 416 aa15.25■□□□□ 0.03
POLR2J3-213ENST00000508848 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
POLR2J3-213ENST00000508848 STK26Q9P289 416 aa15.24■□□□□ 0.03
POLR2J3-213ENST00000508848 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
POLR2J3-213ENST00000508848 MST1RQ04912 1400 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms