RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
UBE2D3-221ENST00000507845 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
UBE2D3-221ENST00000507845 SPATA31E1Q6ZUB1 1445 aa19.67■□□□□ 0.74
UBE2D3-221ENST00000507845 THEMISQ8N1K5 641 aaPredicted RBP19.66■□□□□ 0.74
UBE2D3-221ENST00000507845 SLIT1O75093 1534 aa19.66■□□□□ 0.74
UBE2D3-221ENST00000507845 HSPA2P54652 639 aa19.65■□□□□ 0.74
UBE2D3-221ENST00000507845 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
UBE2D3-221ENST00000507845 POLR1AO95602 1720 aaPredicted RBP19.64■□□□□ 0.73
UBE2D3-221ENST00000507845 TMEM2Q9UHN6 1383 aa19.63■□□□□ 0.73
UBE2D3-221ENST00000507845 PPLO60437 1756 aa19.62■□□□□ 0.73
UBE2D3-221ENST00000507845 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
UBE2D3-221ENST00000507845 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
UBE2D3-221ENST00000507845 SIN3AQ96ST3 1273 aa19.62■□□□□ 0.73
UBE2D3-221ENST00000507845 ZFYVE9O95405 1425 aa19.61■□□□□ 0.73
UBE2D3-221ENST00000507845 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
UBE2D3-221ENST00000507845 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
UBE2D3-221ENST00000507845 RIMS2Q9UQ26 1411 aa19.6■□□□□ 0.73
UBE2D3-221ENST00000507845 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
UBE2D3-221ENST00000507845 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
UBE2D3-221ENST00000507845 SCAF11Q99590 1463 aaKnown RBP19.57■□□□□ 0.72
UBE2D3-221ENST00000507845 RGL3Q3MIN7 710 aa19.57■□□□□ 0.72
UBE2D3-221ENST00000507845 LTKP29376 864 aa19.56■□□□□ 0.72
UBE2D3-221ENST00000507845 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
UBE2D3-221ENST00000507845 RPGRIP1LQ68CZ1 1315 aa19.55■□□□□ 0.72
UBE2D3-221ENST00000507845 ANKLE2Q86XL3 938 aa19.55■□□□□ 0.72
UBE2D3-221ENST00000507845 NCKAP5LQ9HCH0 1330 aa19.54■□□□□ 0.72
UBE2D3-221ENST00000507845 TXNDC2Q86VQ3 553 aa19.54■□□□□ 0.72
UBE2D3-221ENST00000507845 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
UBE2D3-221ENST00000507845 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.53■□□□□ 0.72
UBE2D3-221ENST00000507845 MED14O60244 1454 aa19.53■□□□□ 0.72
UBE2D3-221ENST00000507845 IQGAP1P46940 1657 aa19.52■□□□□ 0.72
UBE2D3-221ENST00000507845 HDGFP51858 240 aaKnown RBP19.52■□□□□ 0.72
UBE2D3-221ENST00000507845 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
UBE2D3-221ENST00000507845 MYOM2P54296 1465 aa19.5■□□□□ 0.71
UBE2D3-221ENST00000507845 NPHP4O75161 1426 aaPredicted RBP19.5■□□□□ 0.71
UBE2D3-221ENST00000507845 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
UBE2D3-221ENST00000507845 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
UBE2D3-221ENST00000507845 NRXN3Q9Y4C0 1643 aa19.48■□□□□ 0.71
UBE2D3-221ENST00000507845 VGFO15240 615 aaPredicted RBP19.48■□□□□ 0.71
UBE2D3-221ENST00000507845 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
UBE2D3-221ENST00000507845 L3MBTL2Q969R5 705 aa19.47■□□□□ 0.71
UBE2D3-221ENST00000507845 SETBP1Q9Y6X0 1596 aa19.47■□□□□ 0.71
UBE2D3-221ENST00000507845 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
UBE2D3-221ENST00000507845 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
UBE2D3-221ENST00000507845 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
UBE2D3-221ENST00000507845 STAC3Q96MF2 364 aa19.44■□□□□ 0.7
UBE2D3-221ENST00000507845 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
UBE2D3-221ENST00000507845 SETD1AO15047 1707 aaKnown RBP19.44■□□□□ 0.7
UBE2D3-221ENST00000507845 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
UBE2D3-221ENST00000507845 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
UBE2D3-221ENST00000507845 DIP2AQ14689 1571 aa19.42■□□□□ 0.7
UBE2D3-221ENST00000507845 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
UBE2D3-221ENST00000507845 ALKQ9UM73 1620 aa19.4■□□□□ 0.7
UBE2D3-221ENST00000507845 BCANQ96GW7 911 aa19.4■□□□□ 0.7
UBE2D3-221ENST00000507845 LAMC1P11047 1609 aa19.4■□□□□ 0.7
UBE2D3-221ENST00000507845 SLC26A8Q96RN1 970 aa19.39■□□□□ 0.69
UBE2D3-221ENST00000507845 PRAG1Q86YV5 1406 aa19.39■□□□□ 0.69
UBE2D3-221ENST00000507845 KIAA1210Q9ULL0 1709 aa19.38■□□□□ 0.69
UBE2D3-221ENST00000507845 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
UBE2D3-221ENST00000507845 TBX22Q9Y458 520 aa19.37■□□□□ 0.69
UBE2D3-221ENST00000507845 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
UBE2D3-221ENST00000507845 TRPM1Q7Z4N2 1603 aa19.34■□□□□ 0.69
UBE2D3-221ENST00000507845 C14orf93Q9H972 538 aaKnown RBP19.34■□□□□ 0.69
UBE2D3-221ENST00000507845 ASXL1Q8IXJ9 1541 aa19.34■□□□□ 0.69
UBE2D3-221ENST00000507845 STRCP1A6NGW2 1772 aa19.34■□□□□ 0.69
UBE2D3-221ENST00000507845 CFAP70Q5T0N1 1121 aa19.33■□□□□ 0.68
UBE2D3-221ENST00000507845 METP08581 1390 aa19.32■□□□□ 0.68
UBE2D3-221ENST00000507845 NBPF8Q3BBV2 869 aa19.32■□□□□ 0.68
UBE2D3-221ENST00000507845 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
UBE2D3-221ENST00000507845 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
UBE2D3-221ENST00000507845 ADGRB1O14514 1584 aa19.3■□□□□ 0.68
UBE2D3-221ENST00000507845 XRN1Q8IZH2 1706 aaKnown RBP19.3■□□□□ 0.68
UBE2D3-221ENST00000507845 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
UBE2D3-221ENST00000507845 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
UBE2D3-221ENST00000507845 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.68
UBE2D3-221ENST00000507845 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
UBE2D3-221ENST00000507845 RALGAPBQ86X10 1494 aa19.27■□□□□ 0.67
UBE2D3-221ENST00000507845 KCNA6P17658 529 aa19.26■□□□□ 0.67
UBE2D3-221ENST00000507845 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
UBE2D3-221ENST00000507845 LTBP4Q8N2S1 1624 aa19.25■□□□□ 0.67
UBE2D3-221ENST00000507845 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
UBE2D3-221ENST00000507845 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
UBE2D3-221ENST00000507845 LRPPRCP42704 1394 aaKnown RBP19.24■□□□□ 0.67
UBE2D3-221ENST00000507845 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
UBE2D3-221ENST00000507845 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
UBE2D3-221ENST00000507845 CPS1P31327 1500 aa19.22■□□□□ 0.67
UBE2D3-221ENST00000507845 GPRASP1Q5JY77 1395 aa19.21■□□□□ 0.67
UBE2D3-221ENST00000507845 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
UBE2D3-221ENST00000507845 TECPR2O15040 1411 aa19.21■□□□□ 0.67
UBE2D3-221ENST00000507845 ROCK2O75116 1388 aaKnown RBP19.2■□□□□ 0.66
UBE2D3-221ENST00000507845 ABCC11Q96J66 1382 aa19.2■□□□□ 0.66
UBE2D3-221ENST00000507845 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
UBE2D3-221ENST00000507845 STK26Q9P289 416 aa19.2■□□□□ 0.66
UBE2D3-221ENST00000507845 PTCH1Q13635 1447 aa19.19■□□□□ 0.66
UBE2D3-221ENST00000507845 DLC1Q96QB1 1528 aa19.19■□□□□ 0.66
UBE2D3-221ENST00000507845 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
UBE2D3-221ENST00000507845 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
UBE2D3-221ENST00000507845 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
UBE2D3-221ENST00000507845 PROSER2Q86WR7 435 aaPredicted RBP19.14■□□□□ 0.65
UBE2D3-221ENST00000507845 CARD11Q9BXL7 1154 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms