RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 SLC4A3P48751 1232 aa14.89□□□□□ -0.03
PFDN1-202ENST00000507185 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
PFDN1-202ENST00000507185 SLF2Q8IX21 1173 aa14.88□□□□□ -0.03
PFDN1-202ENST00000507185 DNAJB2P25686 324 aa14.86□□□□□ -0.03
PFDN1-202ENST00000507185 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
PFDN1-202ENST00000507185 KCNC4Q03721 635 aa14.85□□□□□ -0.03
PFDN1-202ENST00000507185 TULP1O00294 542 aaPredicted RBP14.84□□□□□ -0.03
PFDN1-202ENST00000507185 GNPATO15228 680 aa14.83□□□□□ -0.04
PFDN1-202ENST00000507185 OATP04181 439 aa14.82□□□□□ -0.04
PFDN1-202ENST00000507185 A0A0G2JS52 829 aa14.81□□□□□ -0.04
PFDN1-202ENST00000507185 RCCD1A6NED2 376 aa14.81□□□□□ -0.04
PFDN1-202ENST00000507185 GPIHBP1Q8IV16 184 aa14.81□□□□□ -0.04
PFDN1-202ENST00000507185 TMEM134Q9H6X4 195 aa14.8□□□□□ -0.04
PFDN1-202ENST00000507185 GPR37O15354 613 aa14.79□□□□□ -0.04
PFDN1-202ENST00000507185 FECHP22830 423 aa14.78□□□□□ -0.04
PFDN1-202ENST00000507185 APLP1P51693 650 aa14.78□□□□□ -0.04
PFDN1-202ENST00000507185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.77□□□□□ -0.05
PFDN1-202ENST00000507185 PXYLP1Q8TE99 480 aa14.77□□□□□ -0.05
PFDN1-202ENST00000507185 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
PFDN1-202ENST00000507185 TJAP1Q5JTD0 557 aa14.75□□□□□ -0.05
PFDN1-202ENST00000507185 MTRQ99707 1265 aa14.75□□□□□ -0.05
PFDN1-202ENST00000507185 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
PFDN1-202ENST00000507185 PRR14Q9BWN1 585 aa14.73□□□□□ -0.05
PFDN1-202ENST00000507185 IL21Q9HBE4 155 aa14.73□□□□□ -0.05
PFDN1-202ENST00000507185 RGS20O76081 388 aa14.71□□□□□ -0.05
PFDN1-202ENST00000507185 CUX2O14529 1486 aa14.67□□□□□ -0.06
PFDN1-202ENST00000507185 COPS2P61201 443 aa14.66□□□□□ -0.06
PFDN1-202ENST00000507185 ZNF516Q92618 1163 aa14.66□□□□□ -0.06
PFDN1-202ENST00000507185 KMT5BQ4FZB7 885 aa14.65□□□□□ -0.06
PFDN1-202ENST00000507185 PCDHB3Q9Y5E6 796 aa14.65□□□□□ -0.06
PFDN1-202ENST00000507185 RSPH4AQ5TD94 716 aa14.64□□□□□ -0.07
PFDN1-202ENST00000507185 CFHP08603 1231 aa14.63□□□□□ -0.07
PFDN1-202ENST00000507185 SLC10A3P09131 477 aa14.62□□□□□ -0.07
PFDN1-202ENST00000507185 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
PFDN1-202ENST00000507185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
PFDN1-202ENST00000507185 ACTN4O43707 911 aaKnown RBP14.59□□□□□ -0.07
PFDN1-202ENST00000507185 NLRP7Q8WX94 980 aa14.59□□□□□ -0.07
PFDN1-202ENST00000507185 MAP2K5Q13163 448 aa14.58□□□□□ -0.08
PFDN1-202ENST00000507185 ZPR1O75312 459 aa14.57□□□□□ -0.08
PFDN1-202ENST00000507185 BLOC1S3Q6QNY0 202 aa14.57□□□□□ -0.08
PFDN1-202ENST00000507185 NKX2-3Q8TAU0 364 aa14.57□□□□□ -0.08
PFDN1-202ENST00000507185 PHOX2BQ99453 314 aa14.57□□□□□ -0.08
PFDN1-202ENST00000507185 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
PFDN1-202ENST00000507185 PPP1R18Q6NYC8 613 aa14.55□□□□□ -0.08
PFDN1-202ENST00000507185 RDH13Q8NBN7 331 aa14.55□□□□□ -0.08
PFDN1-202ENST00000507185 IRF6O14896 467 aa14.54□□□□□ -0.08
PFDN1-202ENST00000507185 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
PFDN1-202ENST00000507185 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
PFDN1-202ENST00000507185 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
PFDN1-202ENST00000507185 SULF1Q8IWU6 871 aa14.52□□□□□ -0.09
PFDN1-202ENST00000507185 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.51□□□□□ -0.09
PFDN1-202ENST00000507185 GGCXP38435 758 aa14.5□□□□□ -0.09
PFDN1-202ENST00000507185 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
PFDN1-202ENST00000507185 NESP48681 1621 aa14.49□□□□□ -0.09
PFDN1-202ENST00000507185 NR1I2O75469 434 aa14.48□□□□□ -0.09
PFDN1-202ENST00000507185 CCDC102AQ96A19 550 aa14.46□□□□□ -0.09
PFDN1-202ENST00000507185 IRX2Q9BZI1 471 aaPredicted RBP14.46□□□□□ -0.09
PFDN1-202ENST00000507185 TLL1O43897 1013 aa14.45□□□□□ -0.1
PFDN1-202ENST00000507185 PUS10Q3MIT2 529 aaKnown RBP14.45□□□□□ -0.1
PFDN1-202ENST00000507185 GCGRP47871 477 aa14.43□□□□□ -0.1
PFDN1-202ENST00000507185 SCUBE3Q8IX30 993 aa14.43□□□□□ -0.1
PFDN1-202ENST00000507185 TMUB1Q9BVT8 246 aa14.43□□□□□ -0.1
PFDN1-202ENST00000507185 MDM2Q00987 491 aaPredicted RBP14.42□□□□□ -0.1
PFDN1-202ENST00000507185 KRI1Q8N9T8 703 aaKnown RBP14.42□□□□□ -0.1
PFDN1-202ENST00000507185 PRKD2Q9BZL6 878 aa14.42□□□□□ -0.1
PFDN1-202ENST00000507185 FUT2Q10981 343 aa14.41□□□□□ -0.1
PFDN1-202ENST00000507185 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
PFDN1-202ENST00000507185 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
PFDN1-202ENST00000507185 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
PFDN1-202ENST00000507185 ADH1BP00325 375 aa14.38□□□□□ -0.11
PFDN1-202ENST00000507185 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
PFDN1-202ENST00000507185 MORN1Q5T089 497 aa14.37□□□□□ -0.11
PFDN1-202ENST00000507185 ZC3H15Q8WU90 426 aaKnown RBP14.37□□□□□ -0.11
PFDN1-202ENST00000507185 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
PFDN1-202ENST00000507185 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
PFDN1-202ENST00000507185 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
PFDN1-202ENST00000507185 RNF223E7ERA6 249 aa14.35□□□□□ -0.11
PFDN1-202ENST00000507185 ZMYND10O75800 440 aa14.35□□□□□ -0.11
PFDN1-202ENST00000507185 S1PR4O95977 384 aa14.35□□□□□ -0.11
PFDN1-202ENST00000507185 CD46P15529 392 aa14.35□□□□□ -0.11
PFDN1-202ENST00000507185 CLCN1P35523 988 aa14.34□□□□□ -0.11
PFDN1-202ENST00000507185 SPSB2Q99619 263 aa14.34□□□□□ -0.11
PFDN1-202ENST00000507185 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
PFDN1-202ENST00000507185 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.12
PFDN1-202ENST00000507185 SLC6A16Q9GZN6 736 aa14.33□□□□□ -0.12
PFDN1-202ENST00000507185 SLC27A5Q9Y2P5 690 aa14.32□□□□□ -0.12
PFDN1-202ENST00000507185 PPEF1O14829 653 aaPredicted RBP14.3□□□□□ -0.12
PFDN1-202ENST00000507185 ANKLE1Q8NAG6 615 aa14.3□□□□□ -0.12
PFDN1-202ENST00000507185 KDM4AO75164 1064 aa14.28□□□□□ -0.12
PFDN1-202ENST00000507185 FMNL1O95466 1100 aaPredicted RBP14.28□□□□□ -0.12
PFDN1-202ENST00000507185 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
PFDN1-202ENST00000507185 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.12
PFDN1-202ENST00000507185 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.12
PFDN1-202ENST00000507185 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
PFDN1-202ENST00000507185 SLC19A1P41440 591 aa14.26□□□□□ -0.13
PFDN1-202ENST00000507185 THAP11Q96EK4 314 aa14.26□□□□□ -0.13
PFDN1-202ENST00000507185 BCANQ96GW7 911 aa14.26□□□□□ -0.13
PFDN1-202ENST00000507185 LAPTM4AQ15012 233 aa14.25□□□□□ -0.13
PFDN1-202ENST00000507185 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
PFDN1-202ENST00000507185 GFRA3O60609 400 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms