RNA–Protein interactions for RNA: ENST00000507118.5

SMAD5-202, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-202ENST00000507118 GCC2Q8IWJ2 1684 aa35.43■■■■□ 3.26
SMAD5-202ENST00000507118 SENP3Q9H4L4 574 aaPredicted RBP35.41■■■■□ 3.26
SMAD5-202ENST00000507118 TMEM131LA2VDJ0 1609 aa35.41■■■■□ 3.26
SMAD5-202ENST00000507118 PLEKHG1Q9ULL1 1385 aa35.39■■■■□ 3.26
SMAD5-202ENST00000507118 MYO5BQ9ULV0 1848 aa35.39■■■■□ 3.26
SMAD5-202ENST00000507118 ROCK1Q13464 1354 aa35.38■■■■□ 3.25
SMAD5-202ENST00000507118 PROSER2Q86WR7 435 aaPredicted RBP35.37■■■■□ 3.25
SMAD5-202ENST00000507118 ROBO1Q9Y6N7 1651 aa35.34■■■■□ 3.25
SMAD5-202ENST00000507118 RIMS2Q9UQ26 1411 aa35.34■■■■□ 3.25
SMAD5-202ENST00000507118 CHD2O14647 1828 aaKnown RBP35.34■■■■□ 3.25
SMAD5-202ENST00000507118 E9PCH4 1651 aa35.32■■■■□ 3.24
SMAD5-202ENST00000507118 RGS17Q9UGC6 210 aaPredicted RBP35.31■■■■□ 3.24
SMAD5-202ENST00000507118 IQGAP3Q86VI3 1631 aa35.31■■■■□ 3.24
SMAD5-202ENST00000507118 HDGFP51858 240 aaKnown RBP35.28■■■■□ 3.24
SMAD5-202ENST00000507118 RBM33Q96EV2 1170 aaKnown RBP35.28■■■■□ 3.24
SMAD5-202ENST00000507118 TBX22Q9Y458 520 aa35.26■■■■□ 3.24
SMAD5-202ENST00000507118 MSH6P52701 1360 aa35.25■■■■□ 3.23
SMAD5-202ENST00000507118 NCOA3Q9Y6Q9 1424 aa35.23■■■■□ 3.23
SMAD5-202ENST00000507118 BCANQ96GW7 911 aa35.23■■■■□ 3.23
SMAD5-202ENST00000507118 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.22■■■■□ 3.23
SMAD5-202ENST00000507118 ADAMTS13Q76LX8 1427 aa35.22■■■■□ 3.23
SMAD5-202ENST00000507118 PPP1R15AO75807 674 aaPredicted RBP35.21■■■■□ 3.23
SMAD5-202ENST00000507118 DIP2AQ14689 1571 aa35.21■■■■□ 3.23
SMAD5-202ENST00000507118 SLAIN2Q9P270 581 aa35.18■■■■□ 3.22
SMAD5-202ENST00000507118 PIK3R4Q99570 1358 aa35.17■■■■□ 3.22
SMAD5-202ENST00000507118 NUP155O75694 1391 aa35.13■■■■□ 3.21
SMAD5-202ENST00000507118 PHLPP1O60346 1717 aa35.11■■■■□ 3.21
SMAD5-202ENST00000507118 CHGAP10645 457 aaKnown RBP35.1■■■■□ 3.21
SMAD5-202ENST00000507118 COL16A1Q07092 1604 aaPredicted RBP35.06■■■■□ 3.2
SMAD5-202ENST00000507118 JCADQ9P266 1359 aa35.06■■■■□ 3.2
SMAD5-202ENST00000507118 POTEAQ6S8J7 498 aa35.05■■■■□ 3.2
SMAD5-202ENST00000507118 TRPM2O94759 1503 aa35.05■■■■□ 3.2
SMAD5-202ENST00000507118 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.04■■■■□ 3.2
SMAD5-202ENST00000507118 NUTM2DQ5VT03 806 aaPredicted RBP35.04■■■■□ 3.2
SMAD5-202ENST00000507118 PTPRUQ92729 1446 aa35.02■■■■□ 3.2
SMAD5-202ENST00000507118 C19orf44Q9H6X5 657 aa35.01■■■■□ 3.2
SMAD5-202ENST00000507118 NRXN3Q9Y4C0 1643 aa35.01■■■■□ 3.19
SMAD5-202ENST00000507118 SPHKAPQ2M3C7 1700 aa35.01■■■■□ 3.19
SMAD5-202ENST00000507118 SETBP1Q9Y6X0 1596 aa35■■■■□ 3.19
SMAD5-202ENST00000507118 AHDC1Q5TGY3 1603 aaPredicted RBP34.99■■■■□ 3.19
SMAD5-202ENST00000507118 CADPS2Q86UW7 1296 aa34.98■■■■□ 3.19
SMAD5-202ENST00000507118 ITGAEP38570 1179 aa34.97■■■■□ 3.19
SMAD5-202ENST00000507118 XRN1Q8IZH2 1706 aaKnown RBP34.96■■■■□ 3.19
SMAD5-202ENST00000507118 AMOTL2Q9Y2J4 779 aa34.95■■■■□ 3.19
SMAD5-202ENST00000507118 DCCP43146 1447 aa34.93■■■■□ 3.18
SMAD5-202ENST00000507118 C14orf37Q86TY3 774 aa34.93■■■■□ 3.18
SMAD5-202ENST00000507118 ATF3P18847 181 aa34.9■■■■□ 3.18
SMAD5-202ENST00000507118 SPATA31A6Q5VVP1 1343 aa34.89■■■■□ 3.18
SMAD5-202ENST00000507118 LRP6O75581 1613 aa34.88■■■■□ 3.17
SMAD5-202ENST00000507118 SHPRHQ149N8 1683 aa34.88■■■■□ 3.17
SMAD5-202ENST00000507118 RRBP1Q9P2E9 1410 aaKnown RBP34.88■■■■□ 3.17
SMAD5-202ENST00000507118 PPARGC1BQ86YN6 1023 aaKnown RBP34.85■■■■□ 3.17
SMAD5-202ENST00000507118 CLTCL1P53675 1640 aa34.84■■■■□ 3.17
SMAD5-202ENST00000507118 NEXMIFQ5QGS0 1516 aa34.84■■■■□ 3.17
SMAD5-202ENST00000507118 BRINP3Q76B58 766 aa34.83■■■■□ 3.17
SMAD5-202ENST00000507118 NAIPQ13075 1403 aa34.82■■■■□ 3.17
SMAD5-202ENST00000507118 METP08581 1390 aa34.82■■■■□ 3.16
SMAD5-202ENST00000507118 MST1RQ04912 1400 aa34.79■■■■□ 3.16
SMAD5-202ENST00000507118 ASXL1Q8IXJ9 1541 aa34.78■■■■□ 3.16
SMAD5-202ENST00000507118 ZNF326Q5BKZ1 582 aaKnown RBP34.77■■■■□ 3.16
SMAD5-202ENST00000507118 NHSL1Q5SYE7 1610 aa34.74■■■■□ 3.15
SMAD5-202ENST00000507118 ADGRL3Q9HAR2 1447 aa34.74■■■■□ 3.15
SMAD5-202ENST00000507118 SETD1AO15047 1707 aaKnown RBP34.74■■■■□ 3.15
SMAD5-202ENST00000507118 SETD5Q9C0A6 1442 aa34.73■■■■□ 3.15
SMAD5-202ENST00000507118 KIF1BO60333 1816 aa34.73■■■■□ 3.15
SMAD5-202ENST00000507118 ZNF772Q68DY9 489 aaPredicted RBP34.7■■■■□ 3.15
SMAD5-202ENST00000507118 NALCNQ8IZF0 1738 aa34.69■■■■□ 3.14
SMAD5-202ENST00000507118 HFM1A2PYH4 1435 aa34.67■■■■□ 3.14
SMAD5-202ENST00000507118 PRAG1Q86YV5 1406 aa34.66■■■■□ 3.14
SMAD5-202ENST00000507118 MEX3CQ5U5Q3 659 aaKnown RBP34.65■■■■□ 3.14
SMAD5-202ENST00000507118 PTCH1Q13635 1447 aa34.64■■■■□ 3.14
SMAD5-202ENST00000507118 LAMC1P11047 1609 aa34.59■■■■□ 3.13
SMAD5-202ENST00000507118 VGFO15240 615 aaPredicted RBP34.58■■■■□ 3.13
SMAD5-202ENST00000507118 LRRC59Q96AG4 307 aaKnown RBP34.58■■■■□ 3.13
SMAD5-202ENST00000507118 RPGRIP1LQ68CZ1 1315 aa34.57■■■■□ 3.13
SMAD5-202ENST00000507118 C1orf167Q5SNV9 1468 aa34.56■■■■□ 3.12
SMAD5-202ENST00000507118 CDK12Q9NYV4 1490 aaPredicted RBP34.56■■■■□ 3.12
SMAD5-202ENST00000507118 PNPLA6Q8IY17 1366 aa34.54■■■■□ 3.12
SMAD5-202ENST00000507118 ROBO2Q9HCK4 1378 aa34.54■■■■□ 3.12
SMAD5-202ENST00000507118 PPLO60437 1756 aa34.53■■■■□ 3.12
SMAD5-202ENST00000507118 NUTM2BA6NNL0 878 aaPredicted RBP34.52■■■■□ 3.12
SMAD5-202ENST00000507118 NUTM2EB1AL46 878 aaPredicted RBP34.52■■■■□ 3.12
SMAD5-202ENST00000507118 NUTM2AQ8IVF1 878 aaPredicted RBP34.52■■■■□ 3.12
SMAD5-202ENST00000507118 DDX17Q92841 729 aaKnown RBP34.5■■■■□ 3.11
SMAD5-202ENST00000507118 TRIM52Q96A61 297 aa34.5■■■■□ 3.11
SMAD5-202ENST00000507118 RXRBP28702 533 aa34.49■■■■□ 3.11
SMAD5-202ENST00000507118 SLC4A1APQ9BWU0 796 aaKnown RBP34.49■■■■□ 3.11
SMAD5-202ENST00000507118 AFF2P51816 1311 aa34.49■■■■□ 3.11
SMAD5-202ENST00000507118 UPF1Q92900 1129 aaKnown RBP eCLIP34.47■■■■□ 3.11
SMAD5-202ENST00000507118 SOS2Q07890 1332 aaPredicted RBP34.44■■■■□ 3.1
SMAD5-202ENST00000507118 ORAI2Q96SN7 254 aa34.39■■■■□ 3.1
SMAD5-202ENST00000507118 CDC42BPGQ6DT37 1551 aa34.37■■■■□ 3.09
SMAD5-202ENST00000507118 SPATA31E1Q6ZUB1 1445 aa34.36■■■■□ 3.09
SMAD5-202ENST00000507118 C8orf37Q96NL8 207 aa34.35■■■■□ 3.09
SMAD5-202ENST00000507118 TECPR2O15040 1411 aa34.34■■■■□ 3.09
SMAD5-202ENST00000507118 RGS12O14924 1447 aa34.32■■■■□ 3.08
SMAD5-202ENST00000507118 RBM6P78332 1123 aaKnown RBP34.32■■■■□ 3.08
SMAD5-202ENST00000507118 COL22A1Q8NFW1 1626 aaPredicted RBP34.32■■■■□ 3.08
SMAD5-202ENST00000507118 IFT172Q9UG01 1749 aa34.32■■■■□ 3.08
SMAD5-202ENST00000507118 CCDC144AA2RUR9 1427 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms