RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 FAM135BQ49AJ0 1406 aa35.75■■■■□ 3.31
CALCOCO2-209ENST00000507076 PROSER2Q86WR7 435 aaPredicted RBP35.74■■■■□ 3.31
CALCOCO2-209ENST00000507076 SLC52A1Q9NWF4 448 aa35.74■■■■□ 3.31
CALCOCO2-209ENST00000507076 NKTRP30414 1462 aaKnown RBP35.73■■■■□ 3.31
CALCOCO2-209ENST00000507076 BCANQ96GW7 911 aa35.73■■■■□ 3.31
CALCOCO2-209ENST00000507076 UNC13BO14795 1591 aa35.72■■■■□ 3.31
CALCOCO2-209ENST00000507076 CHD2O14647 1828 aaKnown RBP35.71■■■■□ 3.31
CALCOCO2-209ENST00000507076 TMEM131LA2VDJ0 1609 aa35.7■■■■□ 3.31
CALCOCO2-209ENST00000507076 ZFYVE9O95405 1425 aa35.68■■■■□ 3.3
CALCOCO2-209ENST00000507076 E9PCH4 1651 aa35.67■■■■□ 3.3
CALCOCO2-209ENST00000507076 RGS17Q9UGC6 210 aaPredicted RBP35.66■■■■□ 3.3
CALCOCO2-209ENST00000507076 RIMS2Q9UQ26 1411 aa35.65■■■■□ 3.3
CALCOCO2-209ENST00000507076 PLEKHG1Q9ULL1 1385 aa35.63■■■■□ 3.29
CALCOCO2-209ENST00000507076 PPP1R15AO75807 674 aaPredicted RBP35.61■■■■□ 3.29
CALCOCO2-209ENST00000507076 MSH6P52701 1360 aa35.61■■■■□ 3.29
CALCOCO2-209ENST00000507076 PHLPP1O60346 1717 aa35.6■■■■□ 3.29
CALCOCO2-209ENST00000507076 IQGAP3Q86VI3 1631 aa35.57■■■■□ 3.29
CALCOCO2-209ENST00000507076 CHGAP10645 457 aaKnown RBP35.55■■■■□ 3.28
CALCOCO2-209ENST00000507076 HDGFP51858 240 aaKnown RBP35.51■■■■□ 3.28
CALCOCO2-209ENST00000507076 NUTM2DQ5VT03 806 aaPredicted RBP35.49■■■■□ 3.27
CALCOCO2-209ENST00000507076 SLAIN2Q9P270 581 aa35.49■■■■□ 3.27
CALCOCO2-209ENST00000507076 ROCK1Q13464 1354 aa35.48■■■■□ 3.27
CALCOCO2-209ENST00000507076 DIP2AQ14689 1571 aa35.47■■■■□ 3.27
CALCOCO2-209ENST00000507076 ADAMTS13Q76LX8 1427 aa35.46■■■■□ 3.27
CALCOCO2-209ENST00000507076 POTEAQ6S8J7 498 aa35.45■■■■□ 3.27
CALCOCO2-209ENST00000507076 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.45■■■■□ 3.27
CALCOCO2-209ENST00000507076 TBX22Q9Y458 520 aa35.45■■■■□ 3.27
CALCOCO2-209ENST00000507076 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.44■■■■□ 3.26
CALCOCO2-209ENST00000507076 COL16A1Q07092 1604 aaPredicted RBP35.44■■■■□ 3.26
CALCOCO2-209ENST00000507076 C14orf37Q86TY3 774 aa35.4■■■■□ 3.26
CALCOCO2-209ENST00000507076 ITGAEP38570 1179 aa35.39■■■■□ 3.26
CALCOCO2-209ENST00000507076 NUP155O75694 1391 aa35.38■■■■□ 3.26
CALCOCO2-209ENST00000507076 JCADQ9P266 1359 aa35.38■■■■□ 3.26
CALCOCO2-209ENST00000507076 SETD1AO15047 1707 aaKnown RBP35.38■■■■□ 3.25
CALCOCO2-209ENST00000507076 SPHKAPQ2M3C7 1700 aa35.38■■■■□ 3.25
CALCOCO2-209ENST00000507076 TRPM2O94759 1503 aa35.37■■■■□ 3.25
CALCOCO2-209ENST00000507076 NCOA3Q9Y6Q9 1424 aa35.37■■■■□ 3.25
CALCOCO2-209ENST00000507076 PIK3R4Q99570 1358 aa35.33■■■■□ 3.25
CALCOCO2-209ENST00000507076 NRXN3Q9Y4C0 1643 aa35.32■■■■□ 3.24
CALCOCO2-209ENST00000507076 AHDC1Q5TGY3 1603 aaPredicted RBP35.3■■■■□ 3.24
CALCOCO2-209ENST00000507076 PTPRUQ92729 1446 aa35.29■■■■□ 3.24
CALCOCO2-209ENST00000507076 PPARGC1BQ86YN6 1023 aaKnown RBP35.28■■■■□ 3.24
CALCOCO2-209ENST00000507076 XRN1Q8IZH2 1706 aaKnown RBP35.27■■■■□ 3.24
CALCOCO2-209ENST00000507076 LRP6O75581 1613 aa35.27■■■■□ 3.24
CALCOCO2-209ENST00000507076 SHPRHQ149N8 1683 aa35.27■■■■□ 3.24
CALCOCO2-209ENST00000507076 CADPS2Q86UW7 1296 aa35.26■■■■□ 3.24
CALCOCO2-209ENST00000507076 C19orf44Q9H6X5 657 aa35.26■■■■□ 3.24
CALCOCO2-209ENST00000507076 ATF3P18847 181 aa35.25■■■■□ 3.23
CALCOCO2-209ENST00000507076 AMOTL2Q9Y2J4 779 aa35.25■■■■□ 3.23
CALCOCO2-209ENST00000507076 SETBP1Q9Y6X0 1596 aa35.23■■■■□ 3.23
CALCOCO2-209ENST00000507076 CLTCL1P53675 1640 aa35.18■■■■□ 3.22
CALCOCO2-209ENST00000507076 SPATA31A6Q5VVP1 1343 aa35.18■■■■□ 3.22
CALCOCO2-209ENST00000507076 ZNF326Q5BKZ1 582 aaKnown RBP35.15■■■■□ 3.22
CALCOCO2-209ENST00000507076 MEX3CQ5U5Q3 659 aaKnown RBP35.15■■■■□ 3.22
CALCOCO2-209ENST00000507076 KIF1BO60333 1816 aa35.14■■■■□ 3.22
CALCOCO2-209ENST00000507076 DCCP43146 1447 aa35.14■■■■□ 3.22
CALCOCO2-209ENST00000507076 BRINP3Q76B58 766 aa35.13■■■■□ 3.21
CALCOCO2-209ENST00000507076 ASXL1Q8IXJ9 1541 aa35.12■■■■□ 3.21
CALCOCO2-209ENST00000507076 NHSL1Q5SYE7 1610 aa35.11■■■■□ 3.21
CALCOCO2-209ENST00000507076 NEXMIFQ5QGS0 1516 aa35.11■■■■□ 3.21
CALCOCO2-209ENST00000507076 METP08581 1390 aa35.1■■■■□ 3.21
CALCOCO2-209ENST00000507076 NALCNQ8IZF0 1738 aa35.09■■■■□ 3.21
CALCOCO2-209ENST00000507076 MST1RQ04912 1400 aa35.07■■■■□ 3.21
CALCOCO2-209ENST00000507076 ZNF772Q68DY9 489 aaPredicted RBP35.03■■■■□ 3.2
CALCOCO2-209ENST00000507076 NUTM2BA6NNL0 878 aaPredicted RBP35.02■■■■□ 3.2
CALCOCO2-209ENST00000507076 NUTM2EB1AL46 878 aaPredicted RBP35.02■■■■□ 3.2
CALCOCO2-209ENST00000507076 NUTM2AQ8IVF1 878 aaPredicted RBP35.02■■■■□ 3.2
CALCOCO2-209ENST00000507076 ADGRL3Q9HAR2 1447 aa35■■■■□ 3.19
CALCOCO2-209ENST00000507076 TRIM52Q96A61 297 aa35■■■■□ 3.19
CALCOCO2-209ENST00000507076 NAIPQ13075 1403 aa34.98■■■■□ 3.19
CALCOCO2-209ENST00000507076 SETD5Q9C0A6 1442 aa34.98■■■■□ 3.19
CALCOCO2-209ENST00000507076 RRBP1Q9P2E9 1410 aaKnown RBP34.97■■■■□ 3.19
CALCOCO2-209ENST00000507076 DDX17Q92841 729 aaKnown RBP34.93■■■■□ 3.18
CALCOCO2-209ENST00000507076 AFF2P51816 1311 aa34.88■■■■□ 3.17
CALCOCO2-209ENST00000507076 PPLO60437 1756 aa34.88■■■■□ 3.17
CALCOCO2-209ENST00000507076 RXRBP28702 533 aa34.87■■■■□ 3.17
CALCOCO2-209ENST00000507076 LRRC59Q96AG4 307 aaKnown RBP34.87■■■■□ 3.17
CALCOCO2-209ENST00000507076 PNPLA6Q8IY17 1366 aa34.86■■■■□ 3.17
CALCOCO2-209ENST00000507076 UPF1Q92900 1129 aaKnown RBP eCLIP34.85■■■■□ 3.17
CALCOCO2-209ENST00000507076 PTCH1Q13635 1447 aa34.84■■■■□ 3.17
CALCOCO2-209ENST00000507076 C1orf167Q5SNV9 1468 aa34.84■■■■□ 3.17
CALCOCO2-209ENST00000507076 LAMC1P11047 1609 aa34.82■■■■□ 3.16
CALCOCO2-209ENST00000507076 CDK12Q9NYV4 1490 aaPredicted RBP34.82■■■■□ 3.16
CALCOCO2-209ENST00000507076 ROBO2Q9HCK4 1378 aa34.81■■■■□ 3.16
CALCOCO2-209ENST00000507076 VGFO15240 615 aaPredicted RBP34.79■■■■□ 3.16
CALCOCO2-209ENST00000507076 C8orf37Q96NL8 207 aa34.79■■■■□ 3.16
CALCOCO2-209ENST00000507076 HFM1A2PYH4 1435 aa34.79■■■■□ 3.16
CALCOCO2-209ENST00000507076 SLC4A1APQ9BWU0 796 aaKnown RBP34.74■■■■□ 3.15
CALCOCO2-209ENST00000507076 PRAG1Q86YV5 1406 aa34.72■■■■□ 3.15
CALCOCO2-209ENST00000507076 ORAI2Q96SN7 254 aa34.72■■■■□ 3.15
CALCOCO2-209ENST00000507076 RGS12O14924 1447 aa34.72■■■■□ 3.15
CALCOCO2-209ENST00000507076 ADAMTS2O95450 1211 aa34.7■■■■□ 3.15
CALCOCO2-209ENST00000507076 RPGRIP1LQ68CZ1 1315 aa34.7■■■■□ 3.15
CALCOCO2-209ENST00000507076 QTRT2Q9H974 415 aaKnown RBP34.68■■■■□ 3.14
CALCOCO2-209ENST00000507076 SOS2Q07890 1332 aaPredicted RBP34.66■■■■□ 3.14
CALCOCO2-209ENST00000507076 IFT172Q9UG01 1749 aa34.64■■■■□ 3.14
CALCOCO2-209ENST00000507076 RBM6P78332 1123 aaKnown RBP34.64■■■■□ 3.14
CALCOCO2-209ENST00000507076 FOXD1Q16676 465 aa34.64■■■■□ 3.14
CALCOCO2-209ENST00000507076 NGLY1Q96IV0 654 aa34.64■■■■□ 3.14
CALCOCO2-209ENST00000507076 CDC42BPGQ6DT37 1551 aa34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms