RNA–Protein interactions for RNA: ENST00000506928.5

POLK-208, Transcript of DNA polymerase kappa, human

TSL 5

Gene POLK, Length 3,820 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLK-208	ENST00000506928	SEMA3F	Q13275	785 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.16	□□□□□ -1.42
POLK-208	ENST00000506928	CLTCL1	P53675	1640 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	GPATCH3	Q96I76	525 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.16	□□□□□ -1.42
POLK-208	ENST00000506928	GABBR1	Q9UBS5	961 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	TOP2A	P11388	1531 aa	Known RBP	6.16	□□□□□ -1.42
POLK-208	ENST00000506928	ZMYM4	Q5VZL5	1548 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	AKAP12	Q02952	1782 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	GAPVD1	Q14C86	1478 aa		6.15	□□□□□ -1.42
POLK-208	ENST00000506928	CENPJ	Q9HC77	1338 aa	Predicted RBP	6.15	□□□□□ -1.42
POLK-208	ENST00000506928	ATL2	Q8NHH9	583 aa		6.15	□□□□□ -1.42
POLK-208	ENST00000506928	KDM4C	Q9H3R0	1056 aa		6.15	□□□□□ -1.42
POLK-208	ENST00000506928	RGS3	P49796	1198 aa		6.15	□□□□□ -1.43
POLK-208	ENST00000506928	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	6.15	□□□□□ -1.43
POLK-208	ENST00000506928	CREBRF	Q8IUR6	639 aa		6.15	□□□□□ -1.43
POLK-208	ENST00000506928	CCDC88B	A6NC98	1476 aa		6.15	□□□□□ -1.43
POLK-208	ENST00000506928	TMX4	Q9H1E5	349 aa	Predicted RBP	6.14	□□□□□ -1.43
POLK-208	ENST00000506928	ERICH3	Q5RHP9	1530 aa		6.14	□□□□□ -1.43
POLK-208	ENST00000506928	SSFA2	P28290	1259 aa		6.14	□□□□□ -1.43
POLK-208	ENST00000506928	POM121	Q96HA1	1249 aa		6.14	□□□□□ -1.43
POLK-208	ENST00000506928	IRF6	O14896	467 aa		6.14	□□□□□ -1.43
POLK-208	ENST00000506928	GET4	Q7L5D6	327 aa	Predicted RBP	6.14	□□□□□ -1.43
POLK-208	ENST00000506928	MIER1	Q8N108	512 aa		6.14	□□□□□ -1.43
POLK-208	ENST00000506928	RHBDL3	P58872	404 aa		6.13	□□□□□ -1.43
POLK-208	ENST00000506928	ERBB3	P21860	1342 aa		6.13	□□□□□ -1.43
POLK-208	ENST00000506928	DMRT2	Q9Y5R5	561 aa		6.13	□□□□□ -1.43
POLK-208	ENST00000506928	CLASP1	Q7Z460	1538 aa		6.13	□□□□□ -1.43
POLK-208	ENST00000506928	DHX16	O60231	1041 aa	Known RBP	6.13	□□□□□ -1.43
POLK-208	ENST00000506928	SLC4A2	P04920	1241 aa		6.13	□□□□□ -1.43
POLK-208	ENST00000506928	MTA3	Q9BTC8	594 aa		6.13	□□□□□ -1.43
POLK-208	ENST00000506928	RBM19	Q9Y4C8	960 aa	Known RBP	6.12	□□□□□ -1.43
POLK-208	ENST00000506928	ARIH1	Q9Y4X5	557 aa	Predicted RBP	6.12	□□□□□ -1.43
POLK-208	ENST00000506928	MYO5C	Q9NQX4	1742 aa		6.12	□□□□□ -1.43
POLK-208	ENST00000506928	MAGI3	Q5TCQ9	1506 aa		6.12	□□□□□ -1.43
POLK-208	ENST00000506928	TSHZ1	Q6ZSZ6	1077 aa		6.12	□□□□□ -1.43
POLK-208	ENST00000506928	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	6.12	□□□□□ -1.43	2e-6	■■■■□ 24.5
POLK-208	ENST00000506928	ZC3H4	Q9UPT8	1303 aa	Known RBP	6.12	□□□□□ -1.43
POLK-208	ENST00000506928	MYBPC2	Q14324	1141 aa		6.12	□□□□□ -1.43
POLK-208	ENST00000506928	PARN	O95453	639 aa	Known RBP	6.11	□□□□□ -1.43
POLK-208	ENST00000506928	CCDC96	Q2M329	555 aa		6.11	□□□□□ -1.43
POLK-208	ENST00000506928	ZFYVE27	Q5T4F4	411 aa		6.11	□□□□□ -1.43
POLK-208	ENST00000506928	IFT172	Q9UG01	1749 aa		6.11	□□□□□ -1.43
POLK-208	ENST00000506928	INO80	Q9ULG1	1556 aa	Predicted RBP	6.11	□□□□□ -1.43
POLK-208	ENST00000506928	SEMA3E	O15041	775 aa		6.11	□□□□□ -1.43
POLK-208	ENST00000506928	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.11	□□□□□ -1.43
POLK-208	ENST00000506928	PLXNC1	O60486	1568 aa		6.11	□□□□□ -1.43
POLK-208	ENST00000506928	MYH15	Q9Y2K3	1946 aa		6.11	□□□□□ -1.43
POLK-208	ENST00000506928	IRX3	P78415	501 aa	Predicted RBP	6.11	□□□□□ -1.43
POLK-208	ENST00000506928	ONECUT3	O60422	494 aa	Predicted RBP	6.1	□□□□□ -1.43
POLK-208	ENST00000506928	PPP1R15A	O75807	674 aa	Predicted RBP	6.1	□□□□□ -1.43
POLK-208	ENST00000506928	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.1	□□□□□ -1.43
POLK-208	ENST00000506928	ADGB	Q8N7X0	1667 aa		6.1	□□□□□ -1.43
POLK-208	ENST00000506928	PMM1	Q92871	262 aa		6.1	□□□□□ -1.43
POLK-208	ENST00000506928	GTPBP6	O43824	516 aa	Predicted RBP	6.1	□□□□□ -1.43
POLK-208	ENST00000506928	CCDC181	Q5TID7	509 aa		6.1	□□□□□ -1.43
POLK-208	ENST00000506928	KRBA2	Q6ZNG9	492 aa		6.1	□□□□□ -1.43
POLK-208	ENST00000506928	MRRF	Q96E11	262 aa	Known RBP	6.1	□□□□□ -1.43
POLK-208	ENST00000506928	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
POLK-208	ENST00000506928	SAMD9	Q5K651	1589 aa		6.09	□□□□□ -1.43
POLK-208	ENST00000506928	EPB41L2	O43491	1005 aa	Known RBP	6.09	□□□□□ -1.43
POLK-208	ENST00000506928	SH3BP5	O60239	455 aa		6.09	□□□□□ -1.43
POLK-208	ENST00000506928	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
POLK-208	ENST00000506928	ABCC10	Q5T3U5	1492 aa		6.09	□□□□□ -1.43
POLK-208	ENST00000506928	MMP14	P50281	582 aa		6.09	□□□□□ -1.44
POLK-208	ENST00000506928	FAM163A	Q96GL9	167 aa	Predicted RBP	6.09	□□□□□ -1.44
POLK-208	ENST00000506928	KCNH8	Q96L42	1107 aa		6.09	□□□□□ -1.44
POLK-208	ENST00000506928	CREB3	O43889	395 aa		6.08	□□□□□ -1.44
POLK-208	ENST00000506928	ZNF513	Q8N8E2	541 aa	Predicted RBP	6.08	□□□□□ -1.44
POLK-208	ENST00000506928	ZBTB12	Q9Y330	459 aa	Predicted RBP	6.08	□□□□□ -1.44
POLK-208	ENST00000506928	SMARCA4	P51532	1647 aa		6.08	□□□□□ -1.44
POLK-208	ENST00000506928	RRP9	O43818	475 aa	Known RBP	6.08	□□□□□ -1.44
POLK-208	ENST00000506928	EGFL6	Q8IUX8	553 aa		6.08	□□□□□ -1.44
POLK-208	ENST00000506928	CCDC97	Q96F63	343 aa	Predicted RBP	6.08	□□□□□ -1.44
POLK-208	ENST00000506928	SPOCK3	Q9BQ16	436 aa		6.08	□□□□□ -1.44
POLK-208	ENST00000506928	SKIV2L	Q15477	1246 aa	Known RBP	6.07	□□□□□ -1.44
POLK-208	ENST00000506928	P3H3	Q8IVL6	736 aa		6.07	□□□□□ -1.44
POLK-208	ENST00000506928	YTHDC1	Q96MU7	727 aa	Known RBP	6.07	□□□□□ -1.44
POLK-208	ENST00000506928	ARID4A	P29374	1257 aa	Predicted RBP	6.07	□□□□□ -1.44
POLK-208	ENST00000506928	LONRF3	Q496Y0	759 aa		6.07	□□□□□ -1.44
POLK-208	ENST00000506928	GOLGA6C	A6NDK9	693 aa		6.07	□□□□□ -1.44
POLK-208	ENST00000506928	GOLGA6B	A6NDN3	693 aa		6.07	□□□□□ -1.44
POLK-208	ENST00000506928	GOLGA6D	P0CG33	693 aa		6.07	□□□□□ -1.44
POLK-208	ENST00000506928	GOLGA6A	Q9NYA3	693 aa		6.07	□□□□□ -1.44
POLK-208	ENST00000506928	CIZ1	Q9ULV3	898 aa	Predicted RBP	6.07	□□□□□ -1.44
POLK-208	ENST00000506928	TTC36	A6NLP5	189 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	DCAF11	Q8TEB1	546 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	PSEN1	P49768	467 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	BPTF	Q12830	3046 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	ABCC2	Q92887	1545 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	COL22A1	Q8NFW1	1626 aa	Predicted RBP	6.06	□□□□□ -1.44
POLK-208	ENST00000506928	ZMYND10	O75800	440 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	LMOD3	Q0VAK6	560 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	NBPF1	Q3BBV0	1214 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	NBPF11	Q86T75	865 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	IVNS1ABP	Q9Y6Y0	642 aa		6.06	□□□□□ -1.44
POLK-208	ENST00000506928	ITSN2	Q9NZM3	1697 aa		6.05	□□□□□ -1.44
POLK-208	ENST00000506928	ZNF280D	Q6N043	979 aa		6.05	□□□□□ -1.44
POLK-208	ENST00000506928	MAMSTR	Q6ZN01	415 aa		6.05	□□□□□ -1.44
POLK-208	ENST00000506928	PAK3	O75914	559 aa	Predicted RBP	6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 604.5 ms