RNA–Protein interactions for RNA: ENST00000506649.5

CD164-208, Transcript of CD164 molecule, human

TSL 3

Gene CD164, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD164-208	ENST00000506649	IQGAP3	Q86VI3	1631 aa		32.42	■■■□□ 2.78
CD164-208	ENST00000506649	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
CD164-208	ENST00000506649	NUP155	O75694	1391 aa		32.42	■■■□□ 2.78
CD164-208	ENST00000506649	TMEM94	Q12767	1356 aa		32.42	■■■□□ 2.78
CD164-208	ENST00000506649	RIMS2	Q9UQ26	1411 aa		32.42	■■■□□ 2.78
CD164-208	ENST00000506649	PPP1R15A	O75807	674 aa	Predicted RBP	32.41	■■■□□ 2.78
CD164-208	ENST00000506649	MED1	Q15648	1581 aa	Predicted RBP	32.41	■■■□□ 2.78
CD164-208	ENST00000506649	PROSER2	Q86WR7	435 aa	Predicted RBP	32.4	■■■□□ 2.78
CD164-208	ENST00000506649	TMEM131L	A2VDJ0	1609 aa		32.4	■■■□□ 2.78
CD164-208	ENST00000506649	NKTR	P30414	1462 aa	Known RBP	32.39	■■■□□ 2.78
CD164-208	ENST00000506649	XIRP1	Q702N8	1843 aa	Known RBP	32.38	■■■□□ 2.77
CD164-208	ENST00000506649		E9PCH4	1651 aa		32.38	■■■□□ 2.77
CD164-208	ENST00000506649	NWD1	Q149M9	1564 aa		32.36	■■■□□ 2.77
CD164-208	ENST00000506649	FAM135B	Q49AJ0	1406 aa		32.35	■■■□□ 2.77
CD164-208	ENST00000506649	CHGA	P10645	457 aa	Known RBP	32.35	■■■□□ 2.77
CD164-208	ENST00000506649	TBX22	Q9Y458	520 aa		32.33	■■■□□ 2.77
CD164-208	ENST00000506649	MYO5B	Q9ULV0	1848 aa		32.3	■■■□□ 2.76
CD164-208	ENST00000506649	RRBP1	Q9P2E9	1410 aa	Known RBP	32.28	■■■□□ 2.76
CD164-208	ENST00000506649	SENP3	Q9H4L4	574 aa	Predicted RBP	32.28	■■■□□ 2.76
CD164-208	ENST00000506649	PHF23	Q9BUL5	403 aa	Predicted RBP	32.27	■■■□□ 2.76
CD164-208	ENST00000506649	MSH6	P52701	1360 aa		32.27	■■■□□ 2.76
CD164-208	ENST00000506649	PIK3R4	Q99570	1358 aa		32.24	■■■□□ 2.75
CD164-208	ENST00000506649	NCOA3	Q9Y6Q9	1424 aa		32.24	■■■□□ 2.75
CD164-208	ENST00000506649	DIP2A	Q14689	1571 aa		32.23	■■■□□ 2.75
CD164-208	ENST00000506649	CHD2	O14647	1828 aa	Known RBP	32.22	■■■□□ 2.75
CD164-208	ENST00000506649	RBM33	Q96EV2	1170 aa	Known RBP	32.22	■■■□□ 2.75
CD164-208	ENST00000506649	ADAMTS13	Q76LX8	1427 aa		32.2	■■■□□ 2.75
CD164-208	ENST00000506649	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.18	■■■□□ 2.74
CD164-208	ENST00000506649	SLAIN2	Q9P270	581 aa		32.16	■■■□□ 2.74
CD164-208	ENST00000506649	NAIP	Q13075	1403 aa		32.14	■■■□□ 2.74
CD164-208	ENST00000506649	ROBO1	Q9Y6N7	1651 aa		32.14	■■■□□ 2.74
CD164-208	ENST00000506649	SPHKAP	Q2M3C7	1700 aa		32.12	■■■□□ 2.73
CD164-208	ENST00000506649	TRPM2	O94759	1503 aa		32.11	■■■□□ 2.73
CD164-208	ENST00000506649	ZNF326	Q5BKZ1	582 aa	Known RBP	32.08	■■■□□ 2.73
CD164-208	ENST00000506649	C14orf37	Q86TY3	774 aa		32.08	■■■□□ 2.73
CD164-208	ENST00000506649	C19orf44	Q9H6X5	657 aa		32.07	■■■□□ 2.72
CD164-208	ENST00000506649	CADPS2	Q86UW7	1296 aa		32.06	■■■□□ 2.72
CD164-208	ENST00000506649	AMOTL2	Q9Y2J4	779 aa		32.06	■■■□□ 2.72
CD164-208	ENST00000506649	HFM1	A2PYH4	1435 aa		32.05	■■■□□ 2.72
CD164-208	ENST00000506649	SETBP1	Q9Y6X0	1596 aa		32.03	■■■□□ 2.72
CD164-208	ENST00000506649	ATF3	P18847	181 aa		32.02	■■■□□ 2.72
CD164-208	ENST00000506649	PTPRU	Q92729	1446 aa		32	■■■□□ 2.71
CD164-208	ENST00000506649	TRIM52	Q96A61	297 aa		31.99	■■■□□ 2.71
CD164-208	ENST00000506649	CLTCL1	P53675	1640 aa		31.97	■■■□□ 2.71
CD164-208	ENST00000506649	JCAD	Q9P266	1359 aa		31.96	■■■□□ 2.71
CD164-208	ENST00000506649	RGS17	Q9UGC6	210 aa	Predicted RBP	31.96	■■■□□ 2.71
CD164-208	ENST00000506649	NRXN3	Q9Y4C0	1643 aa		31.96	■■■□□ 2.71
CD164-208	ENST00000506649	DCC	P43146	1447 aa		31.95	■■■□□ 2.71
CD164-208	ENST00000506649	PHLPP1	O60346	1717 aa		31.95	■■■□□ 2.7
CD164-208	ENST00000506649	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.95	■■■□□ 2.7
CD164-208	ENST00000506649	NEXMIF	Q5QGS0	1516 aa		31.93	■■■□□ 2.7
CD164-208	ENST00000506649	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.92	■■■□□ 2.7
CD164-208	ENST00000506649	XRN1	Q8IZH2	1706 aa	Known RBP	31.91	■■■□□ 2.7
CD164-208	ENST00000506649	MET	P08581	1390 aa		31.91	■■■□□ 2.7
CD164-208	ENST00000506649	VGF	O15240	615 aa	Predicted RBP	31.9	■■■□□ 2.7
CD164-208	ENST00000506649	KIF1B	O60333	1816 aa		31.9	■■■□□ 2.7
CD164-208	ENST00000506649	RPGRIP1L	Q68CZ1	1315 aa		31.89	■■■□□ 2.7
CD164-208	ENST00000506649	COL16A1	Q07092	1604 aa	Predicted RBP	31.86	■■■□□ 2.69
CD164-208	ENST00000506649	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.86	■■■□□ 2.69
CD164-208	ENST00000506649	SPATA31A6	Q5VVP1	1343 aa		31.84	■■■□□ 2.69
CD164-208	ENST00000506649	BRINP3	Q76B58	766 aa		31.83	■■■□□ 2.69
CD164-208	ENST00000506649	ADGRL3	Q9HAR2	1447 aa		31.78	■■■□□ 2.68
CD164-208	ENST00000506649	POTEA	Q6S8J7	498 aa		31.78	■■■□□ 2.68
CD164-208	ENST00000506649	ACIN1	Q9UKV3	1341 aa	Known RBP	31.77	■■■□□ 2.68
CD164-208	ENST00000506649	MST1R	Q04912	1400 aa		31.77	■■■□□ 2.68
CD164-208	ENST00000506649	PTCH1	Q13635	1447 aa		31.75	■■■□□ 2.67
CD164-208	ENST00000506649	ASXL1	Q8IXJ9	1541 aa		31.73	■■■□□ 2.67
CD164-208	ENST00000506649	PRAG1	Q86YV5	1406 aa		31.72	■■■□□ 2.67
CD164-208	ENST00000506649	SHPRH	Q149N8	1683 aa		31.7	■■■□□ 2.67
CD164-208	ENST00000506649	CCDC144A	A2RUR9	1427 aa		31.7	■■■□□ 2.67
CD164-208	ENST00000506649	FOXD1	Q16676	465 aa		31.7	■■■□□ 2.67
CD164-208	ENST00000506649	MEX3C	Q5U5Q3	659 aa	Known RBP	31.69	■■■□□ 2.66
CD164-208	ENST00000506649	SETD5	Q9C0A6	1442 aa		31.68	■■■□□ 2.66
CD164-208	ENST00000506649	MPHOSPH9	Q99550	1183 aa		31.68	■■■□□ 2.66
CD164-208	ENST00000506649	LRRC59	Q96AG4	307 aa	Known RBP	31.66	■■■□□ 2.66
CD164-208	ENST00000506649	LRP6	O75581	1613 aa		31.66	■■■□□ 2.66
CD164-208	ENST00000506649	SETD1A	O15047	1707 aa	Known RBP	31.66	■■■□□ 2.66
CD164-208	ENST00000506649	PPL	O60437	1756 aa		31.66	■■■□□ 2.66
CD164-208	ENST00000506649	ZNF772	Q68DY9	489 aa	Predicted RBP	31.65	■■■□□ 2.66
CD164-208	ENST00000506649	ROBO2	Q9HCK4	1378 aa		31.64	■■■□□ 2.66
CD164-208	ENST00000506649	NALCN	Q8IZF0	1738 aa		31.63	■■■□□ 2.65
CD164-208	ENST00000506649	NHSL1	Q5SYE7	1610 aa		31.62	■■■□□ 2.65
CD164-208	ENST00000506649	ANKRD30B	Q9BXX2	1392 aa		31.62	■■■□□ 2.65
CD164-208	ENST00000506649	C1orf167	Q5SNV9	1468 aa		31.61	■■■□□ 2.65
CD164-208	ENST00000506649	SPATA31E1	Q6ZUB1	1445 aa		31.59	■■■□□ 2.65
CD164-208	ENST00000506649	ADGRF5	Q8IZF2	1346 aa		31.56	■■■□□ 2.64
CD164-208	ENST00000506649	RGL3	Q3MIN7	710 aa		31.56	■■■□□ 2.64
CD164-208	ENST00000506649	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.55	■■■□□ 2.64
CD164-208	ENST00000506649	NUTM2E	B1AL46	878 aa	Predicted RBP	31.55	■■■□□ 2.64
CD164-208	ENST00000506649	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.55	■■■□□ 2.64
CD164-208	ENST00000506649	DDX17	Q92841	729 aa	Known RBP	31.51	■■■□□ 2.63
CD164-208	ENST00000506649	PNPLA6	Q8IY17	1366 aa		31.51	■■■□□ 2.63
CD164-208	ENST00000506649	LAMC1	P11047	1609 aa		31.49	■■■□□ 2.63
CD164-208	ENST00000506649	TECPR2	O15040	1411 aa		31.49	■■■□□ 2.63
CD164-208	ENST00000506649	LRPPRC	P42704	1394 aa	Known RBP	31.48	■■■□□ 2.63
CD164-208	ENST00000506649	ORAI2	Q96SN7	254 aa		31.48	■■■□□ 2.63
CD164-208	ENST00000506649	SOS2	Q07890	1332 aa	Predicted RBP	31.48	■■■□□ 2.63
CD164-208	ENST00000506649	ABCC11	Q96J66	1382 aa		31.47	■■■□□ 2.63
CD164-208	ENST00000506649	PIK3C2G	O75747	1445 aa		31.46	■■■□□ 2.63
CD164-208	ENST00000506649	CDC42BPG	Q6DT37	1551 aa		31.45	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms