RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
CDK7-204ENST00000506563 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
CDK7-204ENST00000506563 L3MBTL2Q969R5 705 aa18.38■□□□□ 0.53
CDK7-204ENST00000506563 TMEM2Q9UHN6 1383 aa18.37■□□□□ 0.53
CDK7-204ENST00000506563 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
CDK7-204ENST00000506563 PPLO60437 1756 aa18.36■□□□□ 0.53
CDK7-204ENST00000506563 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
CDK7-204ENST00000506563 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
CDK7-204ENST00000506563 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
CDK7-204ENST00000506563 RPGRIP1LQ68CZ1 1315 aa18.34■□□□□ 0.53
CDK7-204ENST00000506563 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
CDK7-204ENST00000506563 BCANQ96GW7 911 aa18.34■□□□□ 0.53
CDK7-204ENST00000506563 ZFYVE9O95405 1425 aa18.33■□□□□ 0.53
CDK7-204ENST00000506563 SLIT1O75093 1534 aa18.33■□□□□ 0.52
CDK7-204ENST00000506563 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
CDK7-204ENST00000506563 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
CDK7-204ENST00000506563 LTKP29376 864 aa18.32■□□□□ 0.52
CDK7-204ENST00000506563 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
CDK7-204ENST00000506563 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
CDK7-204ENST00000506563 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
CDK7-204ENST00000506563 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
CDK7-204ENST00000506563 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
CDK7-204ENST00000506563 POLR1AO95602 1720 aaPredicted RBP18.3■□□□□ 0.52
CDK7-204ENST00000506563 VGFO15240 615 aaPredicted RBP18.3■□□□□ 0.52
CDK7-204ENST00000506563 MYOM2P54296 1465 aa18.28■□□□□ 0.52
CDK7-204ENST00000506563 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.52
CDK7-204ENST00000506563 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
CDK7-204ENST00000506563 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
CDK7-204ENST00000506563 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
CDK7-204ENST00000506563 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
CDK7-204ENST00000506563 STRCQ7RTU9 1775 aa18.23■□□□□ 0.51
CDK7-204ENST00000506563 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
CDK7-204ENST00000506563 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
CDK7-204ENST00000506563 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
CDK7-204ENST00000506563 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
CDK7-204ENST00000506563 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
CDK7-204ENST00000506563 CFAP70Q5T0N1 1121 aa18.21■□□□□ 0.51
CDK7-204ENST00000506563 NRXN3Q9Y4C0 1643 aa18.2■□□□□ 0.5
CDK7-204ENST00000506563 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
CDK7-204ENST00000506563 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
CDK7-204ENST00000506563 ALKQ9UM73 1620 aa18.18■□□□□ 0.5
CDK7-204ENST00000506563 MED14O60244 1454 aa18.18■□□□□ 0.5
CDK7-204ENST00000506563 ADAMTS13Q76LX8 1427 aa18.17■□□□□ 0.5
CDK7-204ENST00000506563 TRPM1Q7Z4N2 1603 aa18.17■□□□□ 0.5
CDK7-204ENST00000506563 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
CDK7-204ENST00000506563 LAMC1P11047 1609 aa18.16■□□□□ 0.5
CDK7-204ENST00000506563 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
CDK7-204ENST00000506563 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
CDK7-204ENST00000506563 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
CDK7-204ENST00000506563 SETD1AO15047 1707 aaKnown RBP18.14■□□□□ 0.49
CDK7-204ENST00000506563 DIP2AQ14689 1571 aa18.13■□□□□ 0.49
CDK7-204ENST00000506563 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
CDK7-204ENST00000506563 STK26Q9P289 416 aa18.13■□□□□ 0.49
CDK7-204ENST00000506563 METP08581 1390 aa18.13■□□□□ 0.49
CDK7-204ENST00000506563 RALGAPBQ86X10 1494 aa18.13■□□□□ 0.49
CDK7-204ENST00000506563 ASXL1Q8IXJ9 1541 aa18.12■□□□□ 0.49
CDK7-204ENST00000506563 TBX22Q9Y458 520 aa18.11■□□□□ 0.49
CDK7-204ENST00000506563 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
CDK7-204ENST00000506563 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
CDK7-204ENST00000506563 ADGRB1O14514 1584 aa18.08■□□□□ 0.49
CDK7-204ENST00000506563 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
CDK7-204ENST00000506563 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
CDK7-204ENST00000506563 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
CDK7-204ENST00000506563 AMOTL2Q9Y2J4 779 aa18.06■□□□□ 0.48
CDK7-204ENST00000506563 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
CDK7-204ENST00000506563 ZNF335Q9H4Z2 1342 aaPredicted RBP18.04■□□□□ 0.48
CDK7-204ENST00000506563 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
CDK7-204ENST00000506563 KCNA6P17658 529 aa18.03■□□□□ 0.48
CDK7-204ENST00000506563 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
CDK7-204ENST00000506563 PIK3R4Q99570 1358 aa18.03■□□□□ 0.48
CDK7-204ENST00000506563 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDK7-204ENST00000506563 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
CDK7-204ENST00000506563 STRCP1A6NGW2 1772 aa18.01■□□□□ 0.47
CDK7-204ENST00000506563 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
CDK7-204ENST00000506563 POGKQ9P215 609 aa18■□□□□ 0.47
CDK7-204ENST00000506563 USP47Q96K76 1375 aa18■□□□□ 0.47
CDK7-204ENST00000506563 KNDC1Q76NI1 1749 aa18■□□□□ 0.47
CDK7-204ENST00000506563 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
CDK7-204ENST00000506563 NWD1Q149M9 1564 aa18■□□□□ 0.47
CDK7-204ENST00000506563 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
CDK7-204ENST00000506563 PRAM1Q96QH2 718 aa17.99■□□□□ 0.47
CDK7-204ENST00000506563 ABCC11Q96J66 1382 aa17.99■□□□□ 0.47
CDK7-204ENST00000506563 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
CDK7-204ENST00000506563 HIRIP3Q9BW71 556 aaPredicted RBP17.98■□□□□ 0.47
CDK7-204ENST00000506563 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
CDK7-204ENST00000506563 CPS1P31327 1500 aa17.98■□□□□ 0.47
CDK7-204ENST00000506563 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
CDK7-204ENST00000506563 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
CDK7-204ENST00000506563 HSPA5P11021 654 aaKnown RBP17.96■□□□□ 0.47
CDK7-204ENST00000506563 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
CDK7-204ENST00000506563 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
CDK7-204ENST00000506563 TECPR2O15040 1411 aa17.96■□□□□ 0.47
CDK7-204ENST00000506563 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
CDK7-204ENST00000506563 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
CDK7-204ENST00000506563 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
CDK7-204ENST00000506563 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
CDK7-204ENST00000506563 QRICH2Q9H0J4 1663 aa17.94■□□□□ 0.46
CDK7-204ENST00000506563 ST20-MTHFSA0A0A6YYL1 179 aa17.94■□□□□ 0.46
CDK7-204ENST00000506563 MINK1Q8N4C8 1332 aaPredicted RBP17.94■□□□□ 0.46
CDK7-204ENST00000506563 FAM135BQ49AJ0 1406 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms