RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 TRDNQ13061 729 aa13.65□□□□□ -0.22
KLHL3-207ENST00000506491 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
KLHL3-207ENST00000506491 RRP12Q5JTH9 1297 aaKnown RBP13.64□□□□□ -0.23
KLHL3-207ENST00000506491 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
KLHL3-207ENST00000506491 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
KLHL3-207ENST00000506491 NAP1L1P55209 391 aaKnown RBP13.64□□□□□ -0.23
KLHL3-207ENST00000506491 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
KLHL3-207ENST00000506491 FOSBP53539 338 aa13.62□□□□□ -0.23
KLHL3-207ENST00000506491 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
KLHL3-207ENST00000506491 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
KLHL3-207ENST00000506491 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
KLHL3-207ENST00000506491 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
KLHL3-207ENST00000506491 FYB1O15117 783 aa13.62□□□□□ -0.23
KLHL3-207ENST00000506491 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
KLHL3-207ENST00000506491 BICD2Q8TD16 824 aa13.61□□□□□ -0.23
KLHL3-207ENST00000506491 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
KLHL3-207ENST00000506491 HSP90AA2PQ14568 343 aaPredicted RBP13.61□□□□□ -0.23
KLHL3-207ENST00000506491 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
KLHL3-207ENST00000506491 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
KLHL3-207ENST00000506491 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
KLHL3-207ENST00000506491 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
KLHL3-207ENST00000506491 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
KLHL3-207ENST00000506491 PSME1Q06323 249 aa13.6□□□□□ -0.23
KLHL3-207ENST00000506491 ZNF771Q7L3S4 317 aaPredicted RBP13.6□□□□□ -0.23
KLHL3-207ENST00000506491 ZFYVE27Q5T4F4 411 aa13.6□□□□□ -0.23
KLHL3-207ENST00000506491 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
KLHL3-207ENST00000506491 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
KLHL3-207ENST00000506491 EPS15P42566 896 aa13.59□□□□□ -0.23
KLHL3-207ENST00000506491 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
KLHL3-207ENST00000506491 KIF15Q9NS87 1388 aa13.58□□□□□ -0.23
KLHL3-207ENST00000506491 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.23
KLHL3-207ENST00000506491 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
KLHL3-207ENST00000506491 RNF20Q5VTR2 975 aa13.58□□□□□ -0.24
KLHL3-207ENST00000506491 PANK3Q9H999 370 aa13.58□□□□□ -0.24
KLHL3-207ENST00000506491 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
KLHL3-207ENST00000506491 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
KLHL3-207ENST00000506491 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
KLHL3-207ENST00000506491 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
KLHL3-207ENST00000506491 TMEM132AQ24JP5 1023 aa13.57□□□□□ -0.24
KLHL3-207ENST00000506491 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
KLHL3-207ENST00000506491 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
KLHL3-207ENST00000506491 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
KLHL3-207ENST00000506491 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
KLHL3-207ENST00000506491 REC8O95072 547 aa13.56□□□□□ -0.24
KLHL3-207ENST00000506491 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
KLHL3-207ENST00000506491 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
KLHL3-207ENST00000506491 AK7Q96M32 723 aa13.56□□□□□ -0.24
KLHL3-207ENST00000506491 PLIN1O60240 522 aa13.56□□□□□ -0.24
KLHL3-207ENST00000506491 TEX35Q5T0J7 233 aa13.56□□□□□ -0.24
KLHL3-207ENST00000506491 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
KLHL3-207ENST00000506491 CDR1P51861 262 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 FMN1Q68DA7 1419 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
KLHL3-207ENST00000506491 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 E9PSI1 815 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 PAF1Q8N7H5 531 aa13.55□□□□□ -0.24
KLHL3-207ENST00000506491 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
KLHL3-207ENST00000506491 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
KLHL3-207ENST00000506491 KDM4AO75164 1064 aa13.54□□□□□ -0.24
KLHL3-207ENST00000506491 FKBP5Q13451 457 aaPredicted RBP13.54□□□□□ -0.24
KLHL3-207ENST00000506491 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
KLHL3-207ENST00000506491 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
KLHL3-207ENST00000506491 WASHC4Q2M389 1173 aa13.53□□□□□ -0.24
KLHL3-207ENST00000506491 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
KLHL3-207ENST00000506491 NACADO15069 1562 aa13.53□□□□□ -0.24
KLHL3-207ENST00000506491 SOGA1O94964 1423 aa13.53□□□□□ -0.24
KLHL3-207ENST00000506491 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
KLHL3-207ENST00000506491 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.24
KLHL3-207ENST00000506491 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.24
KLHL3-207ENST00000506491 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.24
KLHL3-207ENST00000506491 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.25
KLHL3-207ENST00000506491 CRBNQ96SW2 442 aa13.52□□□□□ -0.25
KLHL3-207ENST00000506491 ROCK1Q13464 1354 aa13.52□□□□□ -0.25
KLHL3-207ENST00000506491 OFD1O75665 1012 aa13.52□□□□□ -0.25
KLHL3-207ENST00000506491 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.25
KLHL3-207ENST00000506491 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
KLHL3-207ENST00000506491 DIAPH1O60610 1272 aaKnown RBP13.51□□□□□ -0.25
KLHL3-207ENST00000506491 AIMP1Q12904 312 aaKnown RBP13.51□□□□□ -0.25
KLHL3-207ENST00000506491 GSE1Q14687 1217 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 RIPK4P57078 832 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 CCDC173Q0VFZ6 552 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 CCDC73Q6ZRK6 1079 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 ERC2O15083 957 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 PDILTQ8N807 584 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
KLHL3-207ENST00000506491 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
KLHL3-207ENST00000506491 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
KLHL3-207ENST00000506491 ATF3P18847 181 aa13.49□□□□□ -0.25
KLHL3-207ENST00000506491 RAPGEF4Q8WZA2 1011 aa13.49□□□□□ -0.25
KLHL3-207ENST00000506491 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
KLHL3-207ENST00000506491 API5Q9BZZ5 524 aaKnown RBP13.49□□□□□ -0.25
KLHL3-207ENST00000506491 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms