RNA–Protein interactions for RNA: ENST00000506444.1

FAM90A3P-201, Transcript of family with sequence similarity 90 member A3, pseudogene, humanhuman

BASIC

Gene FAM90A3P, Length 1,395 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A3P-201ENST00000506444 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
FAM90A3P-201ENST00000506444 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
FAM90A3P-201ENST00000506444 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
FAM90A3P-201ENST00000506444 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.02■□□□□ 0.32
FAM90A3P-201ENST00000506444 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.31
FAM90A3P-201ENST00000506444 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.31
FAM90A3P-201ENST00000506444 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
FAM90A3P-201ENST00000506444 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
FAM90A3P-201ENST00000506444 IFT172Q9UG01 1749 aa17■□□□□ 0.31
FAM90A3P-201ENST00000506444 PPLO60437 1756 aa17■□□□□ 0.31
FAM90A3P-201ENST00000506444 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
FAM90A3P-201ENST00000506444 PRAG1Q86YV5 1406 aa16.99■□□□□ 0.31
FAM90A3P-201ENST00000506444 SLIT1O75093 1534 aa16.99■□□□□ 0.31
FAM90A3P-201ENST00000506444 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
FAM90A3P-201ENST00000506444 ARHGAP23Q9P227 1491 aa16.98■□□□□ 0.31
FAM90A3P-201ENST00000506444 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
FAM90A3P-201ENST00000506444 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
FAM90A3P-201ENST00000506444 ADGRF5Q8IZF2 1346 aa16.95■□□□□ 0.3
FAM90A3P-201ENST00000506444 PIK3C2GO75747 1445 aa16.94■□□□□ 0.3
FAM90A3P-201ENST00000506444 TXNDC2Q86VQ3 553 aa16.93■□□□□ 0.3
FAM90A3P-201ENST00000506444 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
FAM90A3P-201ENST00000506444 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
FAM90A3P-201ENST00000506444 ANKLE2Q86XL3 938 aa16.92■□□□□ 0.3
FAM90A3P-201ENST00000506444 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
FAM90A3P-201ENST00000506444 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
FAM90A3P-201ENST00000506444 KIAA1210Q9ULL0 1709 aa16.9■□□□□ 0.3
FAM90A3P-201ENST00000506444 LAMC1P11047 1609 aa16.9■□□□□ 0.3
FAM90A3P-201ENST00000506444 TRPM1Q7Z4N2 1603 aa16.9■□□□□ 0.3
FAM90A3P-201ENST00000506444 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
FAM90A3P-201ENST00000506444 LTKP29376 864 aa16.89■□□□□ 0.3
FAM90A3P-201ENST00000506444 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.3
FAM90A3P-201ENST00000506444 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
FAM90A3P-201ENST00000506444 SETBP1Q9Y6X0 1596 aa16.88■□□□□ 0.29
FAM90A3P-201ENST00000506444 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
FAM90A3P-201ENST00000506444 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
FAM90A3P-201ENST00000506444 BCANQ96GW7 911 aa16.87■□□□□ 0.29
FAM90A3P-201ENST00000506444 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
FAM90A3P-201ENST00000506444 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
FAM90A3P-201ENST00000506444 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
FAM90A3P-201ENST00000506444 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
FAM90A3P-201ENST00000506444 MED14O60244 1454 aa16.83■□□□□ 0.29
FAM90A3P-201ENST00000506444 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
FAM90A3P-201ENST00000506444 HSPA2P54652 639 aa16.82■□□□□ 0.28
FAM90A3P-201ENST00000506444 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
FAM90A3P-201ENST00000506444 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
FAM90A3P-201ENST00000506444 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
FAM90A3P-201ENST00000506444 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.28
FAM90A3P-201ENST00000506444 TBX22Q9Y458 520 aa16.81■□□□□ 0.28
FAM90A3P-201ENST00000506444 ADAMTS13Q76LX8 1427 aa16.81■□□□□ 0.28
FAM90A3P-201ENST00000506444 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
FAM90A3P-201ENST00000506444 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
FAM90A3P-201ENST00000506444 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
FAM90A3P-201ENST00000506444 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
FAM90A3P-201ENST00000506444 USP47Q96K76 1375 aa16.79■□□□□ 0.28
FAM90A3P-201ENST00000506444 PIK3R4Q99570 1358 aa16.78■□□□□ 0.28
FAM90A3P-201ENST00000506444 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
FAM90A3P-201ENST00000506444 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
FAM90A3P-201ENST00000506444 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
FAM90A3P-201ENST00000506444 ASXL1Q8IXJ9 1541 aa16.76■□□□□ 0.27
FAM90A3P-201ENST00000506444 YTHDC2Q9H6S0 1430 aaKnown RBP16.76■□□□□ 0.27
FAM90A3P-201ENST00000506444 METP08581 1390 aa16.76■□□□□ 0.27
FAM90A3P-201ENST00000506444 LRPPRCP42704 1394 aaKnown RBP16.76■□□□□ 0.27
FAM90A3P-201ENST00000506444 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
FAM90A3P-201ENST00000506444 ABCC11Q96J66 1382 aa16.73■□□□□ 0.27
FAM90A3P-201ENST00000506444 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
FAM90A3P-201ENST00000506444 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
FAM90A3P-201ENST00000506444 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
FAM90A3P-201ENST00000506444 STK26Q9P289 416 aa16.72■□□□□ 0.27
FAM90A3P-201ENST00000506444 DLC1Q96QB1 1528 aa16.71■□□□□ 0.27
FAM90A3P-201ENST00000506444 TECPR2O15040 1411 aa16.71■□□□□ 0.27
FAM90A3P-201ENST00000506444 SIRT1Q96EB6 747 aa16.71■□□□□ 0.27
FAM90A3P-201ENST00000506444 ST20-MTHFSA0A0A6YYL1 179 aa16.7■□□□□ 0.26
FAM90A3P-201ENST00000506444 STRCQ7RTU9 1775 aa16.7■□□□□ 0.26
FAM90A3P-201ENST00000506444 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
FAM90A3P-201ENST00000506444 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
FAM90A3P-201ENST00000506444 KNDC1Q76NI1 1749 aa16.69■□□□□ 0.26
FAM90A3P-201ENST00000506444 FAM135BQ49AJ0 1406 aa16.68■□□□□ 0.26
FAM90A3P-201ENST00000506444 CPS1P31327 1500 aa16.68■□□□□ 0.26
FAM90A3P-201ENST00000506444 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
FAM90A3P-201ENST00000506444 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
FAM90A3P-201ENST00000506444 POGKQ9P215 609 aa16.67■□□□□ 0.26
FAM90A3P-201ENST00000506444 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
FAM90A3P-201ENST00000506444 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
FAM90A3P-201ENST00000506444 SBNO2Q9Y2G9 1366 aa16.66■□□□□ 0.26
FAM90A3P-201ENST00000506444 KCNA6P17658 529 aa16.66■□□□□ 0.26
FAM90A3P-201ENST00000506444 XRN1Q8IZH2 1706 aaKnown RBP16.65■□□□□ 0.26
FAM90A3P-201ENST00000506444 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
FAM90A3P-201ENST00000506444 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
FAM90A3P-201ENST00000506444 NWD1Q149M9 1564 aa16.64■□□□□ 0.25
FAM90A3P-201ENST00000506444 TMF1P82094 1093 aa16.64■□□□□ 0.25
FAM90A3P-201ENST00000506444 TESK2Q96S53 571 aa16.64■□□□□ 0.25
FAM90A3P-201ENST00000506444 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
FAM90A3P-201ENST00000506444 ROBO2Q9HCK4 1378 aa16.63■□□□□ 0.25
FAM90A3P-201ENST00000506444 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
FAM90A3P-201ENST00000506444 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
FAM90A3P-201ENST00000506444 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
FAM90A3P-201ENST00000506444 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
FAM90A3P-201ENST00000506444 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
FAM90A3P-201ENST00000506444 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
FAM90A3P-201ENST00000506444 PLEKHH1Q9ULM0 1364 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms