RNA–Protein interactions for RNA: ENST00000506065.1

PRDM5-208, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-208ENST00000506065 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
PRDM5-208ENST00000506065 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
PRDM5-208ENST00000506065 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
PRDM5-208ENST00000506065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
PRDM5-208ENST00000506065 PRSS12P56730 875 aa12.58□□□□□ -0.4
PRDM5-208ENST00000506065 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
PRDM5-208ENST00000506065 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
PRDM5-208ENST00000506065 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
PRDM5-208ENST00000506065 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
PRDM5-208ENST00000506065 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
PRDM5-208ENST00000506065 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
PRDM5-208ENST00000506065 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
PRDM5-208ENST00000506065 TUSC1Q2TAM9 212 aa12.54□□□□□ -0.4
PRDM5-208ENST00000506065 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
PRDM5-208ENST00000506065 TRAIPQ9BWF2 469 aa12.54□□□□□ -0.4
PRDM5-208ENST00000506065 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
PRDM5-208ENST00000506065 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
PRDM5-208ENST00000506065 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
PRDM5-208ENST00000506065 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
PRDM5-208ENST00000506065 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
PRDM5-208ENST00000506065 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.41
PRDM5-208ENST00000506065 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
PRDM5-208ENST00000506065 SOCS7O14512 581 aa12.5□□□□□ -0.41
PRDM5-208ENST00000506065 SPTLC1O15269 473 aa12.5□□□□□ -0.41
PRDM5-208ENST00000506065 CD46P15529 392 aa12.5□□□□□ -0.41
PRDM5-208ENST00000506065 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
PRDM5-208ENST00000506065 RIMBP2O15034 1052 aa12.48□□□□□ -0.41
PRDM5-208ENST00000506065 NUDT7P0C024 238 aa12.48□□□□□ -0.41
PRDM5-208ENST00000506065 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
PRDM5-208ENST00000506065 MTMR14Q8NCE2 650 aa12.48□□□□□ -0.41
PRDM5-208ENST00000506065 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
PRDM5-208ENST00000506065 GJA5P36382 358 aa12.47□□□□□ -0.41
PRDM5-208ENST00000506065 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
PRDM5-208ENST00000506065 DNAJB2P25686 324 aa12.45□□□□□ -0.42
PRDM5-208ENST00000506065 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
PRDM5-208ENST00000506065 EYA1Q99502 592 aa12.45□□□□□ -0.42
PRDM5-208ENST00000506065 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
PRDM5-208ENST00000506065 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
PRDM5-208ENST00000506065 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
PRDM5-208ENST00000506065 FBXO31Q5XUX0 539 aaPredicted RBP12.44□□□□□ -0.42
PRDM5-208ENST00000506065 CALR3Q96L12 384 aaKnown RBP12.44□□□□□ -0.42
PRDM5-208ENST00000506065 ZSWIM6Q9HCJ5 1215 aa12.44□□□□□ -0.42
PRDM5-208ENST00000506065 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
PRDM5-208ENST00000506065 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
PRDM5-208ENST00000506065 ABL2P42684 1182 aa12.43□□□□□ -0.42
PRDM5-208ENST00000506065 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
PRDM5-208ENST00000506065 AP1G2O75843 785 aa12.42□□□□□ -0.42
PRDM5-208ENST00000506065 ARSIQ5FYB1 569 aa12.42□□□□□ -0.42
PRDM5-208ENST00000506065 ERBB3P21860 1342 aa12.41□□□□□ -0.42
PRDM5-208ENST00000506065 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
PRDM5-208ENST00000506065 MOXD2PA6NHM9 499 aa12.41□□□□□ -0.42
PRDM5-208ENST00000506065 LILRB3O75022 631 aa12.41□□□□□ -0.42
PRDM5-208ENST00000506065 PDE4CQ08493 712 aa12.41□□□□□ -0.42
PRDM5-208ENST00000506065 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
PRDM5-208ENST00000506065 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
PRDM5-208ENST00000506065 NUTM2DQ5VT03 806 aaPredicted RBP12.4□□□□□ -0.42
PRDM5-208ENST00000506065 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
PRDM5-208ENST00000506065 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
PRDM5-208ENST00000506065 RETREG2Q8NC44 543 aa12.4□□□□□ -0.42
PRDM5-208ENST00000506065 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
PRDM5-208ENST00000506065 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
PRDM5-208ENST00000506065 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
PRDM5-208ENST00000506065 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRDM5-208ENST00000506065 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
PRDM5-208ENST00000506065 PTPREP23469 700 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 QPCTQ16769 361 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
PRDM5-208ENST00000506065 PACS2Q86VP3 889 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 GLMNQ92990 594 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
PRDM5-208ENST00000506065 USP17L8P0C7I0 530 aa12.37□□□□□ -0.43
PRDM5-208ENST00000506065 COL9A1P20849 921 aa12.37□□□□□ -0.43
PRDM5-208ENST00000506065 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
PRDM5-208ENST00000506065 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
PRDM5-208ENST00000506065 NDUFV2P19404 249 aa12.36□□□□□ -0.43
PRDM5-208ENST00000506065 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
PRDM5-208ENST00000506065 TATDN2Q93075 761 aa12.36□□□□□ -0.43
PRDM5-208ENST00000506065 USP46P62068 366 aa12.35□□□□□ -0.43
PRDM5-208ENST00000506065 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
PRDM5-208ENST00000506065 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
PRDM5-208ENST00000506065 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
PRDM5-208ENST00000506065 KDM4AO75164 1064 aa12.34□□□□□ -0.43
PRDM5-208ENST00000506065 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
PRDM5-208ENST00000506065 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
PRDM5-208ENST00000506065 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
PRDM5-208ENST00000506065 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
PRDM5-208ENST00000506065 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
PRDM5-208ENST00000506065 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
PRDM5-208ENST00000506065 POM121CA8CG34 1229 aa12.32□□□□□ -0.44
PRDM5-208ENST00000506065 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
PRDM5-208ENST00000506065 WASHC4Q2M389 1173 aa12.3□□□□□ -0.44
PRDM5-208ENST00000506065 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
PRDM5-208ENST00000506065 FDX1P10109 184 aa12.28□□□□□ -0.44
PRDM5-208ENST00000506065 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
PRDM5-208ENST00000506065 HOXA2O43364 376 aa12.27□□□□□ -0.45
PRDM5-208ENST00000506065 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
PRDM5-208ENST00000506065 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms