RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF784Q8NCA9 323 aaPredicted RBP5.9□□□□□ -1.46
TCOF1-208ENST00000506063 MARF1Q9Y4F3 1742 aaKnown RBP5.9□□□□□ -1.47
TCOF1-208ENST00000506063 TMEM2Q9UHN6 1383 aa5.9□□□□□ -1.47
TCOF1-208ENST00000506063 RTEL1-TNFRSF6BF6WH68 1400 aa5.9□□□□□ -1.47
TCOF1-208ENST00000506063 GLI3P10071 1580 aa5.89□□□□□ -1.47
TCOF1-208ENST00000506063 RANGAP1P46060 587 aaPredicted RBP5.89□□□□□ -1.47
TCOF1-208ENST00000506063 BRINP3Q76B58 766 aa5.89□□□□□ -1.47
TCOF1-208ENST00000506063 CDK11AQ9UQ88 783 aaPredicted RBP5.89□□□□□ -1.47
TCOF1-208ENST00000506063 WASHC2CQ9Y4E1 1318 aa5.89□□□□□ -1.47
TCOF1-208ENST00000506063 NCOA3Q9Y6Q9 1424 aa5.89□□□□□ -1.47
TCOF1-208ENST00000506063 LAMC1P11047 1609 aa5.88□□□□□ -1.47
TCOF1-208ENST00000506063 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.88□□□□□ -1.47
TCOF1-208ENST00000506063 KIF3BO15066 747 aa5.88□□□□□ -1.47
TCOF1-208ENST00000506063 SLC34A2O95436 690 aa5.88□□□□□ -1.47
TCOF1-208ENST00000506063 FNBP4Q8N3X1 1017 aaPredicted RBP5.88□□□□□ -1.47
TCOF1-208ENST00000506063 SLC26A8Q96RN1 970 aa5.88□□□□□ -1.47
TCOF1-208ENST00000506063 PLEKHH2Q8IVE3 1493 aa5.88□□□□□ -1.47
TCOF1-208ENST00000506063 ARHGAP35Q9NRY4 1499 aa5.88□□□□□ -1.47
TCOF1-208ENST00000506063 TRPC5Q9UL62 973 aaPredicted RBP5.87□□□□□ -1.47
TCOF1-208ENST00000506063 FMN1Q68DA7 1419 aa5.87□□□□□ -1.47
TCOF1-208ENST00000506063 TNS1Q9HBL0 1735 aaKnown RBP5.86□□□□□ -1.47
TCOF1-208ENST00000506063 COL22A1Q8NFW1 1626 aaPredicted RBP5.86□□□□□ -1.47
TCOF1-208ENST00000506063 USP21Q9UK80 565 aa5.86□□□□□ -1.47
TCOF1-208ENST00000506063 ZNF777Q9ULD5 760 aaPredicted RBP5.86□□□□□ -1.47
TCOF1-208ENST00000506063 MYO5BQ9ULV0 1848 aa5.85□□□□□ -1.47
TCOF1-208ENST00000506063 EFCAB6Q5THR3 1501 aa5.85□□□□□ -1.47
TCOF1-208ENST00000506063 MST1RQ04912 1400 aa5.84□□□□□ -1.47
TCOF1-208ENST00000506063 ADAMTS2O95450 1211 aa5.84□□□□□ -1.47
TCOF1-208ENST00000506063 R3HDM1Q15032 1099 aaKnown RBP5.84□□□□□ -1.47
TCOF1-208ENST00000506063 EID1Q9Y6B2 187 aa5.84□□□□□ -1.47
TCOF1-208ENST00000506063 PTCH1Q13635 1447 aa5.83□□□□□ -1.48
TCOF1-208ENST00000506063 RGPD1P0DJD0 1748 aa5.83□□□□□ -1.48
TCOF1-208ENST00000506063 ZNF644Q9H582 1327 aaPredicted RBP5.83□□□□□ -1.48
TCOF1-208ENST00000506063 CADPS2Q86UW7 1296 aa5.83□□□□□ -1.48
TCOF1-208ENST00000506063 DDX17Q92841 729 aaKnown RBP5.83□□□□□ -1.48
TCOF1-208ENST00000506063 LRRC59Q96AG4 307 aaKnown RBP5.83□□□□□ -1.48
TCOF1-208ENST00000506063 EIF2AK4Q9P2K8 1649 aaKnown RBP5.83□□□□□ -1.48
TCOF1-208ENST00000506063 RALGAPBQ86X10 1494 aa5.83□□□□□ -1.48
TCOF1-208ENST00000506063 DCCP43146 1447 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 ARHGAP31Q2M1Z3 1444 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 RREB1Q92766 1687 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 CSRNP3Q8WYN3 585 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 GJD4Q96KN9 370 aaPredicted RBP5.82□□□□□ -1.48
TCOF1-208ENST00000506063 C19orf44Q9H6X5 657 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 ATP1B4Q9UN42 357 aaPredicted RBP5.82□□□□□ -1.48
TCOF1-208ENST00000506063 MYOM2P54296 1465 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 CCDC18Q5T9S5 1454 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 DISP2A7MBM2 1401 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 ZFYVE9O95405 1425 aa5.82□□□□□ -1.48
TCOF1-208ENST00000506063 NINLQ9Y2I6 1382 aa5.81□□□□□ -1.48
TCOF1-208ENST00000506063 ADGRB3O60242 1522 aa5.81□□□□□ -1.48
TCOF1-208ENST00000506063 NUP188Q5SRE5 1749 aa5.81□□□□□ -1.48
TCOF1-208ENST00000506063 GOLGB1Q14789 3259 aaKnown RBP5.8□□□□□ -1.48
TCOF1-208ENST00000506063 XRN1Q8IZH2 1706 aaKnown RBP5.8□□□□□ -1.48
TCOF1-208ENST00000506063 ADAMTS13Q76LX8 1427 aa5.8□□□□□ -1.48
TCOF1-208ENST00000506063 NALCNQ8IZF0 1738 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 TRPM2O94759 1503 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 SLIT2O94813 1529 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 CCDC141Q6ZP82 1450 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 ATF3P18847 181 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 EN1Q05925 392 aaPredicted RBP5.79□□□□□ -1.48
TCOF1-208ENST00000506063 CFDP1Q9UEE9 299 aaPredicted RBP5.79□□□□□ -1.48
TCOF1-208ENST00000506063 CASKIN1Q8WXD9 1431 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 PTPRUQ92729 1446 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 SHANK3Q9BYB0 1731 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 PLEKHG1Q9ULL1 1385 aa5.79□□□□□ -1.48
TCOF1-208ENST00000506063 SOS2Q07890 1332 aaPredicted RBP5.78□□□□□ -1.48
TCOF1-208ENST00000506063 BAG6P46379 1132 aa5.78□□□□□ -1.48
TCOF1-208ENST00000506063 SF3B2Q13435 895 aaKnown RBP5.78□□□□□ -1.48
TCOF1-208ENST00000506063 IDI1Q13907 227 aa5.78□□□□□ -1.48
TCOF1-208ENST00000506063 CHIC1Q5VXU3 224 aa5.78□□□□□ -1.48
TCOF1-208ENST00000506063 CASZ1Q86V15 1759 aa5.78□□□□□ -1.48
TCOF1-208ENST00000506063 ONECUT3O60422 494 aaPredicted RBP5.77□□□□□ -1.49
TCOF1-208ENST00000506063 MYOM1P52179 1685 aa5.77□□□□□ -1.49
TCOF1-208ENST00000506063 ARHGEF5Q12774 1597 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 NRKQ7Z2Y5 1582 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 GCC2Q8IWJ2 1684 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 EHBP1L1Q8N3D4 1523 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 SEPT12Q8IYM1 358 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 TBX22Q9Y458 520 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 PTPN23Q9H3S7 1636 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 NWD2Q9ULI1 1742 aa5.76□□□□□ -1.49
TCOF1-208ENST00000506063 PLCH1Q4KWH8 1693 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 NOS1P29475 1434 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 PCNTO95613 3336 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 TMEM131LA2VDJ0 1609 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 NRXN3Q9Y4C0 1643 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 EZH2Q15910 746 aaKnown RBP5.75□□□□□ -1.49
TCOF1-208ENST00000506063 C14orf37Q86TY3 774 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 CAMKK2Q96RR4 588 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 PCDH10Q9P2E7 1040 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 CCNB3Q8WWL7 1395 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 PIK3R4Q99570 1358 aa5.75□□□□□ -1.49
TCOF1-208ENST00000506063 KRT27Q7Z3Y8 459 aa5.74□□□□□ -1.49
TCOF1-208ENST00000506063 UNC5CLQ8IV45 518 aa5.74□□□□□ -1.49
TCOF1-208ENST00000506063 MTUS2Q5JR59 1369 aa5.74□□□□□ -1.49
TCOF1-208ENST00000506063 C1orf167Q5SNV9 1468 aa5.74□□□□□ -1.49
TCOF1-208ENST00000506063 NRAPQ86VF7 1730 aa5.74□□□□□ -1.49
TCOF1-208ENST00000506063 USP32Q8NFA0 1604 aa5.74□□□□□ -1.49
TCOF1-208ENST00000506063 THSD7AQ9UPZ6 1657 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms