RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
TRAPPC11-204ENST00000505676 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
TRAPPC11-204ENST00000505676 MROH2AA6NES4 1674 aa23.58■■□□□ 1.37
TRAPPC11-204ENST00000505676 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
TRAPPC11-204ENST00000505676 AGLP35573 1532 aa23.58■■□□□ 1.36
TRAPPC11-204ENST00000505676 HNRNPUQ00839 825 aaKnown RBP eCLIP23.56■■□□□ 1.36
TRAPPC11-204ENST00000505676 YEATS2Q9ULM3 1422 aa23.56■■□□□ 1.36
TRAPPC11-204ENST00000505676 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
TRAPPC11-204ENST00000505676 BRD4O60885 1362 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC11-204ENST00000505676 MYBBP1AQ9BQG0 1328 aaKnown RBP23.53■■□□□ 1.36
TRAPPC11-204ENST00000505676 PPLO60437 1756 aa23.53■■□□□ 1.36
TRAPPC11-204ENST00000505676 SBNO2Q9Y2G9 1366 aa23.51■■□□□ 1.35
TRAPPC11-204ENST00000505676 ZBED9Q6R2W3 1325 aa23.51■■□□□ 1.35
TRAPPC11-204ENST00000505676 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
TRAPPC11-204ENST00000505676 MYO3AQ8NEV4 1616 aa23.51■■□□□ 1.35
TRAPPC11-204ENST00000505676 SYNMO15061 1565 aa23.51■■□□□ 1.35
TRAPPC11-204ENST00000505676 PARD3Q8TEW0 1356 aa23.5■■□□□ 1.35
TRAPPC11-204ENST00000505676 PIK3C2GO75747 1445 aa23.49■■□□□ 1.35
TRAPPC11-204ENST00000505676 CCDC184Q52MB2 194 aa23.49■■□□□ 1.35
TRAPPC11-204ENST00000505676 ADGRF5Q8IZF2 1346 aa23.47■■□□□ 1.35
TRAPPC11-204ENST00000505676 SIGLEC1Q9BZZ2 1709 aa23.47■■□□□ 1.35
TRAPPC11-204ENST00000505676 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC11-204ENST00000505676 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
TRAPPC11-204ENST00000505676 ZFYVE9O95405 1425 aa23.47■■□□□ 1.35
TRAPPC11-204ENST00000505676 NEFLP07196 543 aa23.47■■□□□ 1.35
TRAPPC11-204ENST00000505676 FAM9BQ8IZU0 186 aa23.45■■□□□ 1.35
TRAPPC11-204ENST00000505676 PELP1Q8IZL8 1130 aaKnown RBP23.44■■□□□ 1.34
TRAPPC11-204ENST00000505676 TMC1Q8TDI8 760 aa23.44■■□□□ 1.34
TRAPPC11-204ENST00000505676 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
TRAPPC11-204ENST00000505676 INSRP06213 1382 aa23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 KDM5AP29375 1690 aaKnown RBP23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 PREX1Q8TCU6 1659 aa23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 TSPOAP1O95153 1857 aa23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 CFAP70Q5T0N1 1121 aa23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
TRAPPC11-204ENST00000505676 NEXMIFQ5QGS0 1516 aa23.41■■□□□ 1.34
TRAPPC11-204ENST00000505676 ARHGEF40Q8TER5 1519 aa23.41■■□□□ 1.34
TRAPPC11-204ENST00000505676 CHGAP10645 457 aaKnown RBP23.41■■□□□ 1.34
TRAPPC11-204ENST00000505676 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
TRAPPC11-204ENST00000505676 NPC1L1Q9UHC9 1359 aa23.4■■□□□ 1.34
TRAPPC11-204ENST00000505676 PNISRQ8TF01 805 aaKnown RBP23.4■■□□□ 1.34
TRAPPC11-204ENST00000505676 PANK3Q9H999 370 aa23.4■■□□□ 1.34
TRAPPC11-204ENST00000505676 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
TRAPPC11-204ENST00000505676 ADGRB1O14514 1584 aa23.38■■□□□ 1.33
TRAPPC11-204ENST00000505676 CFAP65Q6ZU64 1925 aaKnown RBP23.36■■□□□ 1.33
TRAPPC11-204ENST00000505676 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
TRAPPC11-204ENST00000505676 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC11-204ENST00000505676 TMEM131LA2VDJ0 1609 aa23.33■■□□□ 1.33
TRAPPC11-204ENST00000505676 PUS7Q96PZ0 661 aaKnown RBP23.33■■□□□ 1.33
TRAPPC11-204ENST00000505676 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.33
TRAPPC11-204ENST00000505676 MYOM1P52179 1685 aa23.33■■□□□ 1.33
TRAPPC11-204ENST00000505676 ASXL1Q8IXJ9 1541 aa23.32■■□□□ 1.32
TRAPPC11-204ENST00000505676 IDI1Q13907 227 aa23.32■■□□□ 1.32
TRAPPC11-204ENST00000505676 ERICH6BQ5W0A0 696 aa23.32■■□□□ 1.32
TRAPPC11-204ENST00000505676 SPATA31D1Q6ZQQ2 1576 aa23.3■■□□□ 1.32
TRAPPC11-204ENST00000505676 FKBP8Q14318 412 aa23.28■■□□□ 1.32
TRAPPC11-204ENST00000505676 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.32
TRAPPC11-204ENST00000505676 QRICH2Q9H0J4 1663 aa23.27■■□□□ 1.32
TRAPPC11-204ENST00000505676 CLTCQ00610 1675 aaKnown RBP23.25■■□□□ 1.31
TRAPPC11-204ENST00000505676 AMER1Q5JTC6 1135 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC11-204ENST00000505676 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC11-204ENST00000505676 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
TRAPPC11-204ENST00000505676 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
TRAPPC11-204ENST00000505676 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
TRAPPC11-204ENST00000505676 BLMP54132 1417 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC11-204ENST00000505676 PDE3BQ13370 1112 aa23.18■■□□□ 1.3
TRAPPC11-204ENST00000505676 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
TRAPPC11-204ENST00000505676 NINLQ9Y2I6 1382 aa23.18■■□□□ 1.3
TRAPPC11-204ENST00000505676 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
TRAPPC11-204ENST00000505676 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
TRAPPC11-204ENST00000505676 USP32Q8NFA0 1604 aa23.16■■□□□ 1.3
TRAPPC11-204ENST00000505676 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
TRAPPC11-204ENST00000505676 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.3
TRAPPC11-204ENST00000505676 A2ML1A8K2U0 1454 aa23.14■■□□□ 1.3
TRAPPC11-204ENST00000505676 PPP2R1AP30153 589 aa23.14■■□□□ 1.29
TRAPPC11-204ENST00000505676 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC11-204ENST00000505676 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
TRAPPC11-204ENST00000505676 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
TRAPPC11-204ENST00000505676 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
TRAPPC11-204ENST00000505676 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
TRAPPC11-204ENST00000505676 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
TRAPPC11-204ENST00000505676 YTHDC2Q9H6S0 1430 aaKnown RBP23.09■■□□□ 1.29
TRAPPC11-204ENST00000505676 HDGFP51858 240 aaKnown RBP23.09■■□□□ 1.29
TRAPPC11-204ENST00000505676 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.29
TRAPPC11-204ENST00000505676 RIMS2Q9UQ26 1411 aa23.08■■□□□ 1.29
TRAPPC11-204ENST00000505676 NSD2O96028 1365 aa23.08■■□□□ 1.29
TRAPPC11-204ENST00000505676 PTPRMP28827 1452 aa23.07■■□□□ 1.28
TRAPPC11-204ENST00000505676 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
TRAPPC11-204ENST00000505676 ANKRD36BQ8N2N9 1353 aa23.06■■□□□ 1.28
TRAPPC11-204ENST00000505676 RNF123Q5XPI4 1314 aa23.05■■□□□ 1.28
TRAPPC11-204ENST00000505676 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRAPPC11-204ENST00000505676 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
TRAPPC11-204ENST00000505676 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
TRAPPC11-204ENST00000505676 NSD3Q9BZ95 1437 aa23.03■■□□□ 1.28
TRAPPC11-204ENST00000505676 NGEFQ8N5V2 710 aa23.02■■□□□ 1.28
TRAPPC11-204ENST00000505676 TNRQ92752 1358 aa23.02■■□□□ 1.28
TRAPPC11-204ENST00000505676 MLECQ14165 292 aa23.02■■□□□ 1.28
TRAPPC11-204ENST00000505676 CGNL1Q0VF96 1302 aa23.01■■□□□ 1.27
TRAPPC11-204ENST00000505676 POLR3AO14802 1390 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms