RNA–Protein interactions for RNA: ENST00000505617.5

APBB3-210, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-210ENST00000505617 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
APBB3-210ENST00000505617 SLC26A8Q96RN1 970 aa23.21■■□□□ 1.31
APBB3-210ENST00000505617 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
APBB3-210ENST00000505617 RIMS2Q9UQ26 1411 aa23.2■■□□□ 1.3
APBB3-210ENST00000505617 NUP155O75694 1391 aa23.19■■□□□ 1.3
APBB3-210ENST00000505617 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
APBB3-210ENST00000505617 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
APBB3-210ENST00000505617 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
APBB3-210ENST00000505617 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
APBB3-210ENST00000505617 KCNA6P17658 529 aa23.17■■□□□ 1.3
APBB3-210ENST00000505617 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
APBB3-210ENST00000505617 BCANQ96GW7 911 aa23.16■■□□□ 1.3
APBB3-210ENST00000505617 SOCS7O14512 581 aa23.15■■□□□ 1.3
APBB3-210ENST00000505617 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
APBB3-210ENST00000505617 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
APBB3-210ENST00000505617 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
APBB3-210ENST00000505617 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
APBB3-210ENST00000505617 HDGFP51858 240 aaKnown RBP23.11■■□□□ 1.29
APBB3-210ENST00000505617 ROBO1Q9Y6N7 1651 aa23.11■■□□□ 1.29
APBB3-210ENST00000505617 PROSER2Q86WR7 435 aaPredicted RBP23.1■■□□□ 1.29
APBB3-210ENST00000505617 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.09■■□□□ 1.29
APBB3-210ENST00000505617 RBM33Q96EV2 1170 aaKnown RBP23.07■■□□□ 1.28
APBB3-210ENST00000505617 FAM135BQ49AJ0 1406 aa23.07■■□□□ 1.28
APBB3-210ENST00000505617 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
APBB3-210ENST00000505617 MSH6P52701 1360 aa23.05■■□□□ 1.28
APBB3-210ENST00000505617 NAIPQ13075 1403 aa23.05■■□□□ 1.28
APBB3-210ENST00000505617 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
APBB3-210ENST00000505617 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
APBB3-210ENST00000505617 TRPM2O94759 1503 aa23.03■■□□□ 1.28
APBB3-210ENST00000505617 NRXN3Q9Y4C0 1643 aa23.02■■□□□ 1.28
APBB3-210ENST00000505617 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
APBB3-210ENST00000505617 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
APBB3-210ENST00000505617 KIF1BO60333 1816 aa23.01■■□□□ 1.27
APBB3-210ENST00000505617 PIK3R4Q99570 1358 aa23■■□□□ 1.27
APBB3-210ENST00000505617 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
APBB3-210ENST00000505617 HFM1A2PYH4 1435 aa22.98■■□□□ 1.27
APBB3-210ENST00000505617 PHLPP1O60346 1717 aa22.97■■□□□ 1.27
APBB3-210ENST00000505617 XRN1Q8IZH2 1706 aaKnown RBP22.97■■□□□ 1.27
APBB3-210ENST00000505617 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.96■■□□□ 1.27
APBB3-210ENST00000505617 NCOA3Q9Y6Q9 1424 aa22.96■■□□□ 1.27
APBB3-210ENST00000505617 NEXMIFQ5QGS0 1516 aa22.95■■□□□ 1.26
APBB3-210ENST00000505617 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
APBB3-210ENST00000505617 C14orf37Q86TY3 774 aa22.93■■□□□ 1.26
APBB3-210ENST00000505617 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
APBB3-210ENST00000505617 SLAIN2Q9P270 581 aa22.91■■□□□ 1.26
APBB3-210ENST00000505617 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
APBB3-210ENST00000505617 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
APBB3-210ENST00000505617 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
APBB3-210ENST00000505617 CADPS2Q86UW7 1296 aa22.85■■□□□ 1.25
APBB3-210ENST00000505617 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
APBB3-210ENST00000505617 SETD1AO15047 1707 aaKnown RBP22.85■■□□□ 1.25
APBB3-210ENST00000505617 DCCP43146 1447 aa22.84■■□□□ 1.25
APBB3-210ENST00000505617 C19orf44Q9H6X5 657 aa22.84■■□□□ 1.25
APBB3-210ENST00000505617 ATF3P18847 181 aa22.83■■□□□ 1.25
APBB3-210ENST00000505617 METP08581 1390 aa22.83■■□□□ 1.25
APBB3-210ENST00000505617 PPLO60437 1756 aa22.83■■□□□ 1.24
APBB3-210ENST00000505617 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
APBB3-210ENST00000505617 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
APBB3-210ENST00000505617 JCADQ9P266 1359 aa22.81■■□□□ 1.24
APBB3-210ENST00000505617 SHPRHQ149N8 1683 aa22.79■■□□□ 1.24
APBB3-210ENST00000505617 RGS17Q9UGC6 210 aaPredicted RBP22.79■■□□□ 1.24
APBB3-210ENST00000505617 ADGRL3Q9HAR2 1447 aa22.77■■□□□ 1.24
APBB3-210ENST00000505617 ASXL1Q8IXJ9 1541 aa22.77■■□□□ 1.24
APBB3-210ENST00000505617 NHSL1Q5SYE7 1610 aa22.75■■□□□ 1.23
APBB3-210ENST00000505617 MST1RQ04912 1400 aa22.74■■□□□ 1.23
APBB3-210ENST00000505617 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
APBB3-210ENST00000505617 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
APBB3-210ENST00000505617 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
APBB3-210ENST00000505617 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
APBB3-210ENST00000505617 LRP6O75581 1613 aa22.71■■□□□ 1.23
APBB3-210ENST00000505617 RPGRIP1LQ68CZ1 1315 aa22.71■■□□□ 1.23
APBB3-210ENST00000505617 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
APBB3-210ENST00000505617 FOXD1Q16676 465 aa22.7■■□□□ 1.22
APBB3-210ENST00000505617 PRAG1Q86YV5 1406 aa22.7■■□□□ 1.22
APBB3-210ENST00000505617 SPATA31A6Q5VVP1 1343 aa22.69■■□□□ 1.22
APBB3-210ENST00000505617 POTEAQ6S8J7 498 aa22.67■■□□□ 1.22
APBB3-210ENST00000505617 ROBO2Q9HCK4 1378 aa22.65■■□□□ 1.22
APBB3-210ENST00000505617 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
APBB3-210ENST00000505617 MPHOSPH9Q99550 1183 aa22.63■■□□□ 1.21
APBB3-210ENST00000505617 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
APBB3-210ENST00000505617 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
APBB3-210ENST00000505617 LAMC1P11047 1609 aa22.61■■□□□ 1.21
APBB3-210ENST00000505617 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
APBB3-210ENST00000505617 KNDC1Q76NI1 1749 aa22.6■■□□□ 1.21
APBB3-210ENST00000505617 CDC42BPGQ6DT37 1551 aa22.59■■□□□ 1.21
APBB3-210ENST00000505617 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
APBB3-210ENST00000505617 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
APBB3-210ENST00000505617 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
APBB3-210ENST00000505617 PIK3C2GO75747 1445 aa22.56■■□□□ 1.2
APBB3-210ENST00000505617 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
APBB3-210ENST00000505617 DDX17Q92841 729 aaKnown RBP22.55■■□□□ 1.2
APBB3-210ENST00000505617 NUTM2BA6NNL0 878 aaPredicted RBP22.54■■□□□ 1.2
APBB3-210ENST00000505617 NUTM2EB1AL46 878 aaPredicted RBP22.54■■□□□ 1.2
APBB3-210ENST00000505617 NUTM2AQ8IVF1 878 aaPredicted RBP22.54■■□□□ 1.2
APBB3-210ENST00000505617 TECPR2O15040 1411 aa22.54■■□□□ 1.2
APBB3-210ENST00000505617 PNPLA6Q8IY17 1366 aa22.53■■□□□ 1.2
APBB3-210ENST00000505617 ZNF772Q68DY9 489 aaPredicted RBP22.53■■□□□ 1.2
APBB3-210ENST00000505617 LRRC59Q96AG4 307 aaKnown RBP22.53■■□□□ 1.2
APBB3-210ENST00000505617 RAB3GAP2Q9H2M9 1393 aa22.51■■□□□ 1.19
APBB3-210ENST00000505617 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms