RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
UBE2D3-219ENST00000505207 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBE2D3-219ENST00000505207 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
UBE2D3-219ENST00000505207 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
UBE2D3-219ENST00000505207 ROCK1Q13464 1354 aa17.02■□□□□ 0.31
UBE2D3-219ENST00000505207 TET3O43151 1660 aa17.01■□□□□ 0.31
UBE2D3-219ENST00000505207 MSH6P52701 1360 aa17.01■□□□□ 0.31
UBE2D3-219ENST00000505207 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
UBE2D3-219ENST00000505207 TBX22Q9Y458 520 aa17■□□□□ 0.31
UBE2D3-219ENST00000505207 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-219ENST00000505207 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
UBE2D3-219ENST00000505207 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-219ENST00000505207 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
UBE2D3-219ENST00000505207 ZFYVE9O95405 1425 aa16.96■□□□□ 0.31
UBE2D3-219ENST00000505207 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
UBE2D3-219ENST00000505207 NUP155O75694 1391 aa16.95■□□□□ 0.3
UBE2D3-219ENST00000505207 ITGAEP38570 1179 aa16.95■□□□□ 0.3
UBE2D3-219ENST00000505207 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
UBE2D3-219ENST00000505207 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
UBE2D3-219ENST00000505207 UNC13BO14795 1591 aa16.94■□□□□ 0.3
UBE2D3-219ENST00000505207 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
UBE2D3-219ENST00000505207 GCC2Q8IWJ2 1684 aa16.93■□□□□ 0.3
UBE2D3-219ENST00000505207 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
UBE2D3-219ENST00000505207 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
UBE2D3-219ENST00000505207 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
UBE2D3-219ENST00000505207 ATF3P18847 181 aa16.9■□□□□ 0.3
UBE2D3-219ENST00000505207 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
UBE2D3-219ENST00000505207 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-219ENST00000505207 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
UBE2D3-219ENST00000505207 RGS17Q9UGC6 210 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-219ENST00000505207 IQGAP3Q86VI3 1631 aa16.88■□□□□ 0.29
UBE2D3-219ENST00000505207 JCADQ9P266 1359 aa16.87■□□□□ 0.29
UBE2D3-219ENST00000505207 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-219ENST00000505207 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
UBE2D3-219ENST00000505207 E9PCH4 1651 aa16.86■□□□□ 0.29
UBE2D3-219ENST00000505207 ZNF326Q5BKZ1 582 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-219ENST00000505207 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
UBE2D3-219ENST00000505207 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
UBE2D3-219ENST00000505207 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
UBE2D3-219ENST00000505207 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
UBE2D3-219ENST00000505207 TRPM2O94759 1503 aa16.82■□□□□ 0.28
UBE2D3-219ENST00000505207 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
UBE2D3-219ENST00000505207 POTEAQ6S8J7 498 aa16.81■□□□□ 0.28
UBE2D3-219ENST00000505207 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
UBE2D3-219ENST00000505207 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
UBE2D3-219ENST00000505207 MSH5O43196 834 aa16.79■□□□□ 0.28
UBE2D3-219ENST00000505207 DCCP43146 1447 aa16.77■□□□□ 0.27
UBE2D3-219ENST00000505207 ZNF772Q68DY9 489 aaPredicted RBP16.76■□□□□ 0.27
UBE2D3-219ENST00000505207 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-219ENST00000505207 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
UBE2D3-219ENST00000505207 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
UBE2D3-219ENST00000505207 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
UBE2D3-219ENST00000505207 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-219ENST00000505207 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
UBE2D3-219ENST00000505207 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
UBE2D3-219ENST00000505207 RRBP1Q9P2E9 1410 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-219ENST00000505207 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
UBE2D3-219ENST00000505207 NAIPQ13075 1403 aa16.71■□□□□ 0.27
UBE2D3-219ENST00000505207 COL16A1Q07092 1604 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-219ENST00000505207 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-219ENST00000505207 METP08581 1390 aa16.71■□□□□ 0.27
UBE2D3-219ENST00000505207 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
UBE2D3-219ENST00000505207 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-219ENST00000505207 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-219ENST00000505207 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-219ENST00000505207 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-219ENST00000505207 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-219ENST00000505207 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
UBE2D3-219ENST00000505207 RXRBP28702 533 aa16.66■□□□□ 0.26
UBE2D3-219ENST00000505207 MST1RQ04912 1400 aa16.66■□□□□ 0.26
UBE2D3-219ENST00000505207 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
UBE2D3-219ENST00000505207 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
UBE2D3-219ENST00000505207 NRXN3Q9Y4C0 1643 aa16.66■□□□□ 0.26
UBE2D3-219ENST00000505207 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
UBE2D3-219ENST00000505207 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
UBE2D3-219ENST00000505207 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
UBE2D3-219ENST00000505207 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
UBE2D3-219ENST00000505207 LRP6O75581 1613 aa16.64■□□□□ 0.25
UBE2D3-219ENST00000505207 KIF1BO60333 1816 aa16.64■□□□□ 0.25
UBE2D3-219ENST00000505207 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-219ENST00000505207 PTCH1Q13635 1447 aa16.61■□□□□ 0.25
UBE2D3-219ENST00000505207 AFF2P51816 1311 aa16.6■□□□□ 0.25
UBE2D3-219ENST00000505207 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
UBE2D3-219ENST00000505207 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
UBE2D3-219ENST00000505207 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
UBE2D3-219ENST00000505207 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
UBE2D3-219ENST00000505207 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-219ENST00000505207 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE2D3-219ENST00000505207 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
UBE2D3-219ENST00000505207 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-219ENST00000505207 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
UBE2D3-219ENST00000505207 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
UBE2D3-219ENST00000505207 CCDC144AA2RUR9 1427 aa16.55■□□□□ 0.24
UBE2D3-219ENST00000505207 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
UBE2D3-219ENST00000505207 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-219ENST00000505207 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
UBE2D3-219ENST00000505207 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
UBE2D3-219ENST00000505207 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-219ENST00000505207 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
UBE2D3-219ENST00000505207 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms