RNA–Protein interactions for RNA: ENST00000505186.1

TNIP2-204, Transcript of TNFAIP3 interacting protein 2, human

TSL 3

Gene TNIP2, Length 980 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNIP2-204	ENST00000505186	ROBO1	Q9Y6N7	1651 aa		28.42	■■■□□ 2.14
TNIP2-204	ENST00000505186	MYO5B	Q9ULV0	1848 aa		28.42	■■■□□ 2.14
TNIP2-204	ENST00000505186	BCAN	Q96GW7	911 aa		28.42	■■■□□ 2.14
TNIP2-204	ENST00000505186	NKTR	P30414	1462 aa	Known RBP	28.41	■■■□□ 2.14
TNIP2-204	ENST00000505186	GCC2	Q8IWJ2	1684 aa		28.4	■■■□□ 2.14
TNIP2-204	ENST00000505186	RGS17	Q9UGC6	210 aa	Predicted RBP	28.37	■■■□□ 2.13
TNIP2-204	ENST00000505186	ZFYVE9	O95405	1425 aa		28.36	■■■□□ 2.13
TNIP2-204	ENST00000505186	TMEM131L	A2VDJ0	1609 aa		28.35	■■■□□ 2.13
TNIP2-204	ENST00000505186	UNC13B	O14795	1591 aa		28.34	■■■□□ 2.13
TNIP2-204	ENST00000505186	MSH6	P52701	1360 aa		28.34	■■■□□ 2.13
TNIP2-204	ENST00000505186	PLEKHG1	Q9ULL1	1385 aa		28.34	■■■□□ 2.13
TNIP2-204	ENST00000505186	RIMS2	Q9UQ26	1411 aa		28.34	■■■□□ 2.13
TNIP2-204	ENST00000505186	CHD2	O14647	1828 aa	Known RBP	28.33	■■■□□ 2.13
TNIP2-204	ENST00000505186	PPP1R15A	O75807	674 aa	Predicted RBP	28.32	■■■□□ 2.12
TNIP2-204	ENST00000505186	HDGF	P51858	240 aa	Known RBP	28.3	■■■□□ 2.12
TNIP2-204	ENST00000505186		E9PCH4	1651 aa		28.29	■■■□□ 2.12
TNIP2-204	ENST00000505186	PHLPP1	O60346	1717 aa		28.26	■■■□□ 2.12
TNIP2-204	ENST00000505186	CHGA	P10645	457 aa	Known RBP	28.26	■■■□□ 2.11
TNIP2-204	ENST00000505186	SLAIN2	Q9P270	581 aa		28.25	■■■□□ 2.11
TNIP2-204	ENST00000505186	IQGAP3	Q86VI3	1631 aa		28.23	■■■□□ 2.11
TNIP2-204	ENST00000505186	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.22	■■■□□ 2.11
TNIP2-204	ENST00000505186	TBX22	Q9Y458	520 aa		28.22	■■■□□ 2.11
TNIP2-204	ENST00000505186	POTEA	Q6S8J7	498 aa		28.21	■■■□□ 2.11
TNIP2-204	ENST00000505186	ROCK1	Q13464	1354 aa		28.21	■■■□□ 2.11
TNIP2-204	ENST00000505186	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.2	■■■□□ 2.1
TNIP2-204	ENST00000505186	DIP2A	Q14689	1571 aa		28.19	■■■□□ 2.1
TNIP2-204	ENST00000505186	ADAMTS13	Q76LX8	1427 aa		28.18	■■■□□ 2.1
TNIP2-204	ENST00000505186	NCOA3	Q9Y6Q9	1424 aa		28.18	■■■□□ 2.1
TNIP2-204	ENST00000505186	JCAD	Q9P266	1359 aa		28.16	■■■□□ 2.1
TNIP2-204	ENST00000505186	C14orf37	Q86TY3	774 aa		28.16	■■■□□ 2.1
TNIP2-204	ENST00000505186	COL16A1	Q07092	1604 aa	Predicted RBP	28.14	■■■□□ 2.1
TNIP2-204	ENST00000505186	NUP155	O75694	1391 aa		28.13	■■■□□ 2.09
TNIP2-204	ENST00000505186	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.13	■■■□□ 2.09
TNIP2-204	ENST00000505186	PIK3R4	Q99570	1358 aa		28.12	■■■□□ 2.09
TNIP2-204	ENST00000505186	ITGAE	P38570	1179 aa		28.11	■■■□□ 2.09
TNIP2-204	ENST00000505186	TRPM2	O94759	1503 aa		28.11	■■■□□ 2.09
TNIP2-204	ENST00000505186	CADPS2	Q86UW7	1296 aa		28.08	■■■□□ 2.09
TNIP2-204	ENST00000505186	C19orf44	Q9H6X5	657 aa		28.08	■■■□□ 2.09
TNIP2-204	ENST00000505186	ATF3	P18847	181 aa		28.06	■■■□□ 2.08
TNIP2-204	ENST00000505186	SETD1A	O15047	1707 aa	Known RBP	28.05	■■■□□ 2.08
TNIP2-204	ENST00000505186	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.05	■■■□□ 2.08
TNIP2-204	ENST00000505186	PTPRU	Q92729	1446 aa		28.05	■■■□□ 2.08
TNIP2-204	ENST00000505186	AMOTL2	Q9Y2J4	779 aa		28.05	■■■□□ 2.08
TNIP2-204	ENST00000505186	SPHKAP	Q2M3C7	1700 aa		28.04	■■■□□ 2.08
TNIP2-204	ENST00000505186	LRP6	O75581	1613 aa		28.03	■■■□□ 2.08
TNIP2-204	ENST00000505186	SPATA31A6	Q5VVP1	1343 aa		28.02	■■■□□ 2.08
TNIP2-204	ENST00000505186	NRXN3	Q9Y4C0	1643 aa		28.02	■■■□□ 2.08
TNIP2-204	ENST00000505186	SHPRH	Q149N8	1683 aa		28	■■■□□ 2.07
TNIP2-204	ENST00000505186	SETBP1	Q9Y6X0	1596 aa		27.99	■■■□□ 2.07
TNIP2-204	ENST00000505186	XRN1	Q8IZH2	1706 aa	Known RBP	27.99	■■■□□ 2.07
TNIP2-204	ENST00000505186	MEX3C	Q5U5Q3	659 aa	Known RBP	27.98	■■■□□ 2.07
TNIP2-204	ENST00000505186	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.98	■■■□□ 2.07
TNIP2-204	ENST00000505186	ZNF326	Q5BKZ1	582 aa	Known RBP	27.96	■■■□□ 2.07
TNIP2-204	ENST00000505186	BRINP3	Q76B58	766 aa		27.96	■■■□□ 2.07
TNIP2-204	ENST00000505186	DCC	P43146	1447 aa		27.95	■■■□□ 2.07
TNIP2-204	ENST00000505186	ZNF772	Q68DY9	489 aa	Predicted RBP	27.91	■■■□□ 2.06
TNIP2-204	ENST00000505186	ASXL1	Q8IXJ9	1541 aa		27.91	■■■□□ 2.06
TNIP2-204	ENST00000505186	MET	P08581	1390 aa		27.9	■■■□□ 2.06
TNIP2-204	ENST00000505186	CLTCL1	P53675	1640 aa		27.9	■■■□□ 2.06
TNIP2-204	ENST00000505186	NEXMIF	Q5QGS0	1516 aa		27.88	■■■□□ 2.05
TNIP2-204	ENST00000505186	MST1R	Q04912	1400 aa		27.88	■■■□□ 2.05
TNIP2-204	ENST00000505186	NHSL1	Q5SYE7	1610 aa		27.87	■■■□□ 2.05
TNIP2-204	ENST00000505186	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.85	■■■□□ 2.05
TNIP2-204	ENST00000505186	NUTM2E	B1AL46	878 aa	Predicted RBP	27.85	■■■□□ 2.05
TNIP2-204	ENST00000505186	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.85	■■■□□ 2.05
TNIP2-204	ENST00000505186	KIF1B	O60333	1816 aa		27.85	■■■□□ 2.05
TNIP2-204	ENST00000505186	TRIM52	Q96A61	297 aa		27.84	■■■□□ 2.05
TNIP2-204	ENST00000505186	NALCN	Q8IZF0	1738 aa		27.84	■■■□□ 2.05
TNIP2-204	ENST00000505186	SETD5	Q9C0A6	1442 aa		27.83	■■■□□ 2.05
TNIP2-204	ENST00000505186	ADGRL3	Q9HAR2	1447 aa		27.83	■■■□□ 2.05
TNIP2-204	ENST00000505186	NAIP	Q13075	1403 aa		27.79	■■■□□ 2.04
TNIP2-204	ENST00000505186	RRBP1	Q9P2E9	1410 aa	Known RBP	27.78	■■■□□ 2.04
TNIP2-204	ENST00000505186	RXRB	P28702	533 aa		27.77	■■■□□ 2.04
TNIP2-204	ENST00000505186	LRRC59	Q96AG4	307 aa	Known RBP	27.77	■■■□□ 2.04
TNIP2-204	ENST00000505186	DDX17	Q92841	729 aa	Known RBP	27.76	■■■□□ 2.03
TNIP2-204	ENST00000505186	AFF2	P51816	1311 aa		27.75	■■■□□ 2.03
TNIP2-204	ENST00000505186	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
TNIP2-204	ENST00000505186	PNPLA6	Q8IY17	1366 aa		27.72	■■■□□ 2.03
TNIP2-204	ENST00000505186	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.71	■■■□□ 2.03
TNIP2-204	ENST00000505186	PTCH1	Q13635	1447 aa		27.71	■■■□□ 2.03
TNIP2-204	ENST00000505186	C1orf167	Q5SNV9	1468 aa		27.7	■■■□□ 2.02
TNIP2-204	ENST00000505186	VGF	O15240	615 aa	Predicted RBP	27.69	■■■□□ 2.02
TNIP2-204	ENST00000505186	C8orf37	Q96NL8	207 aa		27.69	■■■□□ 2.02
TNIP2-204	ENST00000505186	ROBO2	Q9HCK4	1378 aa		27.68	■■■□□ 2.02
TNIP2-204	ENST00000505186	LAMC1	P11047	1609 aa		27.66	■■■□□ 2.02
TNIP2-204	ENST00000505186	PPL	O60437	1756 aa		27.65	■■■□□ 2.02
TNIP2-204	ENST00000505186	HFM1	A2PYH4	1435 aa		27.65	■■■□□ 2.02
TNIP2-204	ENST00000505186	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.63	■■■□□ 2.01
TNIP2-204	ENST00000505186	PRAG1	Q86YV5	1406 aa		27.63	■■■□□ 2.01
TNIP2-204	ENST00000505186	RPGRIP1L	Q68CZ1	1315 aa		27.63	■■■□□ 2.01
TNIP2-204	ENST00000505186	ORAI2	Q96SN7	254 aa		27.62	■■■□□ 2.01
TNIP2-204	ENST00000505186	QTRT2	Q9H974	415 aa	Known RBP	27.61	■■■□□ 2.01
TNIP2-204	ENST00000505186	RGS12	O14924	1447 aa		27.6	■■■□□ 2.01
TNIP2-204	ENST00000505186	ADAMTS2	O95450	1211 aa		27.6	■■■□□ 2.01
TNIP2-204	ENST00000505186	RBM6	P78332	1123 aa	Known RBP	27.59	■■■□□ 2.01
TNIP2-204	ENST00000505186	SOS2	Q07890	1332 aa	Predicted RBP	27.59	■■■□□ 2.01
TNIP2-204	ENST00000505186	NGLY1	Q96IV0	654 aa		27.57	■■■□□ 2
TNIP2-204	ENST00000505186	CDC42BPG	Q6DT37	1551 aa		27.52	■■■□□ 2
TNIP2-204	ENST00000505186	FOXD1	Q16676	465 aa		27.51	■■□□□ 1.99
TNIP2-204	ENST00000505186	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms