RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
AFF1-205ENST00000504956 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
AFF1-205ENST00000504956 SCAF11Q99590 1463 aaKnown RBP23.07■■□□□ 1.28
AFF1-205ENST00000504956 NCKAP5LQ9HCH0 1330 aa23.07■■□□□ 1.28
AFF1-205ENST00000504956 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
AFF1-205ENST00000504956 NUTM2DQ5VT03 806 aaPredicted RBP23.06■■□□□ 1.28
AFF1-205ENST00000504956 LTKP29376 864 aa23.05■■□□□ 1.28
AFF1-205ENST00000504956 IQGAP1P46940 1657 aa23.04■■□□□ 1.28
AFF1-205ENST00000504956 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
AFF1-205ENST00000504956 TXNDC2Q86VQ3 553 aa23.03■■□□□ 1.28
AFF1-205ENST00000504956 EID1Q9Y6B2 187 aa23.03■■□□□ 1.28
AFF1-205ENST00000504956 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
AFF1-205ENST00000504956 PPP1R15AO75807 674 aaPredicted RBP23.01■■□□□ 1.27
AFF1-205ENST00000504956 MED14O60244 1454 aa22.99■■□□□ 1.27
AFF1-205ENST00000504956 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.27
AFF1-205ENST00000504956 NPHP4O75161 1426 aaPredicted RBP22.99■■□□□ 1.27
AFF1-205ENST00000504956 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
AFF1-205ENST00000504956 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
AFF1-205ENST00000504956 HDGFP51858 240 aaKnown RBP22.97■■□□□ 1.27
AFF1-205ENST00000504956 NRXN3Q9Y4C0 1643 aa22.97■■□□□ 1.27
AFF1-205ENST00000504956 PLEKHG1Q9ULL1 1385 aa22.95■■□□□ 1.26
AFF1-205ENST00000504956 MYOM2P54296 1465 aa22.94■■□□□ 1.26
AFF1-205ENST00000504956 SETBP1Q9Y6X0 1596 aa22.93■■□□□ 1.26
AFF1-205ENST00000504956 DCAF11Q8TEB1 546 aa22.93■■□□□ 1.26
AFF1-205ENST00000504956 BCANQ96GW7 911 aa22.93■■□□□ 1.26
AFF1-205ENST00000504956 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
AFF1-205ENST00000504956 ADGRF5Q8IZF2 1346 aa22.92■■□□□ 1.26
AFF1-205ENST00000504956 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
AFF1-205ENST00000504956 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
AFF1-205ENST00000504956 SETD1AO15047 1707 aaKnown RBP22.91■■□□□ 1.26
AFF1-205ENST00000504956 L3MBTL2Q969R5 705 aa22.9■■□□□ 1.26
AFF1-205ENST00000504956 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
AFF1-205ENST00000504956 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
AFF1-205ENST00000504956 DIP2AQ14689 1571 aa22.88■■□□□ 1.25
AFF1-205ENST00000504956 PIK3C2GO75747 1445 aa22.88■■□□□ 1.25
AFF1-205ENST00000504956 ADAMTS13Q76LX8 1427 aa22.88■■□□□ 1.25
AFF1-205ENST00000504956 SLC26A8Q96RN1 970 aa22.87■■□□□ 1.25
AFF1-205ENST00000504956 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
AFF1-205ENST00000504956 LAMC1P11047 1609 aa22.85■■□□□ 1.25
AFF1-205ENST00000504956 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
AFF1-205ENST00000504956 CHD2O14647 1828 aaKnown RBP22.84■■□□□ 1.25
AFF1-205ENST00000504956 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
AFF1-205ENST00000504956 STAC3Q96MF2 364 aa22.8■■□□□ 1.24
AFF1-205ENST00000504956 KIAA1210Q9ULL0 1709 aa22.8■■□□□ 1.24
AFF1-205ENST00000504956 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
AFF1-205ENST00000504956 TRPM1Q7Z4N2 1603 aa22.78■■□□□ 1.24
AFF1-205ENST00000504956 TBX22Q9Y458 520 aa22.77■■□□□ 1.24
AFF1-205ENST00000504956 METP08581 1390 aa22.77■■□□□ 1.24
AFF1-205ENST00000504956 CFAP70Q5T0N1 1121 aa22.77■■□□□ 1.24
AFF1-205ENST00000504956 ZNF335Q9H4Z2 1342 aaPredicted RBP22.77■■□□□ 1.23
AFF1-205ENST00000504956 NWD1Q149M9 1564 aa22.76■■□□□ 1.23
AFF1-205ENST00000504956 XRN1Q8IZH2 1706 aaKnown RBP22.75■■□□□ 1.23
AFF1-205ENST00000504956 C14orf93Q9H972 538 aaKnown RBP22.74■■□□□ 1.23
AFF1-205ENST00000504956 PTPRUQ92729 1446 aa22.73■■□□□ 1.23
AFF1-205ENST00000504956 NBPF8Q3BBV2 869 aa22.72■■□□□ 1.23
AFF1-205ENST00000504956 TIMELESSQ9UNS1 1208 aa22.72■■□□□ 1.23
AFF1-205ENST00000504956 ADGRB1O14514 1584 aa22.72■■□□□ 1.23
AFF1-205ENST00000504956 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
AFF1-205ENST00000504956 PIK3R4Q99570 1358 aa22.71■■□□□ 1.23
AFF1-205ENST00000504956 KNDC1Q76NI1 1749 aa22.71■■□□□ 1.23
AFF1-205ENST00000504956 LTBP4Q8N2S1 1624 aa22.71■■□□□ 1.23
AFF1-205ENST00000504956 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
AFF1-205ENST00000504956 KCNA6P17658 529 aa22.68■■□□□ 1.22
AFF1-205ENST00000504956 AMOTL2Q9Y2J4 779 aa22.67■■□□□ 1.22
AFF1-205ENST00000504956 YTHDC2Q9H6S0 1430 aaKnown RBP22.67■■□□□ 1.22
AFF1-205ENST00000504956 NKTRP30414 1462 aaKnown RBP22.66■■□□□ 1.22
AFF1-205ENST00000504956 RALGAPBQ86X10 1494 aa22.66■■□□□ 1.22
AFF1-205ENST00000504956 NBPF1Q3BBV0 1214 aa22.66■■□□□ 1.22
AFF1-205ENST00000504956 CPS1P31327 1500 aa22.66■■□□□ 1.22
AFF1-205ENST00000504956 ARHGEF28Q8N1W1 1705 aaKnown RBP22.65■■□□□ 1.22
AFF1-205ENST00000504956 STK26Q9P289 416 aa22.65■■□□□ 1.22
AFF1-205ENST00000504956 ROCK2O75116 1388 aaKnown RBP22.64■■□□□ 1.21
AFF1-205ENST00000504956 LRPPRCP42704 1394 aaKnown RBP22.64■■□□□ 1.21
AFF1-205ENST00000504956 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
AFF1-205ENST00000504956 PTCH1Q13635 1447 aa22.6■■□□□ 1.21
AFF1-205ENST00000504956 TECPR2O15040 1411 aa22.6■■□□□ 1.21
AFF1-205ENST00000504956 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
AFF1-205ENST00000504956 RBM33Q96EV2 1170 aaKnown RBP22.59■■□□□ 1.21
AFF1-205ENST00000504956 ABCC11Q96J66 1382 aa22.58■■□□□ 1.21
AFF1-205ENST00000504956 NALCNQ8IZF0 1738 aa22.58■■□□□ 1.2
AFF1-205ENST00000504956 PROSER2Q86WR7 435 aaPredicted RBP22.58■■□□□ 1.2
AFF1-205ENST00000504956 TRAK1Q9UPV9 953 aa22.58■■□□□ 1.2
AFF1-205ENST00000504956 DLC1Q96QB1 1528 aa22.57■■□□□ 1.2
AFF1-205ENST00000504956 GPRASP1Q5JY77 1395 aa22.57■■□□□ 1.2
AFF1-205ENST00000504956 TMEM94Q12767 1356 aa22.56■■□□□ 1.2
AFF1-205ENST00000504956 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
AFF1-205ENST00000504956 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.54■■□□□ 1.2
AFF1-205ENST00000504956 PLEKHH1Q9ULM0 1364 aa22.54■■□□□ 1.2
AFF1-205ENST00000504956 QRICH2Q9H0J4 1663 aa22.53■■□□□ 1.2
AFF1-205ENST00000504956 WAPLQ7Z5K2 1190 aa22.52■■□□□ 1.2
AFF1-205ENST00000504956 FAM135BQ49AJ0 1406 aa22.52■■□□□ 1.2
AFF1-205ENST00000504956 SAFB2Q14151 953 aaKnown RBP eCLIP22.5■■□□□ 1.194e-6■■■■□ 19.5
AFF1-205ENST00000504956 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
AFF1-205ENST00000504956 C14orf37Q86TY3 774 aa22.49■■□□□ 1.19
AFF1-205ENST00000504956 CERKQ8TCT0 537 aa22.48■■□□□ 1.19
AFF1-205ENST00000504956 POGKQ9P215 609 aa22.48■■□□□ 1.19
AFF1-205ENST00000504956 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
AFF1-205ENST00000504956 SIRT1Q96EB6 747 aa22.46■■□□□ 1.19
AFF1-205ENST00000504956 IQSEC2Q5JU85 1478 aa22.46■■□□□ 1.19
AFF1-205ENST00000504956 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms