RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 WNT2BQ93097 391 aa9.38□□□□□ -0.91
PROM1-205ENST00000504842 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
PROM1-205ENST00000504842 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
PROM1-205ENST00000504842 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
PROM1-205ENST00000504842 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
PROM1-205ENST00000504842 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
PROM1-205ENST00000504842 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
PROM1-205ENST00000504842 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
PROM1-205ENST00000504842 C6orf132Q5T0Z8 1188 aa9.35□□□□□ -0.91
PROM1-205ENST00000504842 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
PROM1-205ENST00000504842 C1orf115Q9H7X2 142 aa9.35□□□□□ -0.91
PROM1-205ENST00000504842 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
PROM1-205ENST00000504842 MCM6Q14566 821 aa9.34□□□□□ -0.91
PROM1-205ENST00000504842 FAM161AQ3B820 660 aa9.34□□□□□ -0.91
PROM1-205ENST00000504842 THSD4Q6ZMP0 1018 aa9.34□□□□□ -0.91
PROM1-205ENST00000504842 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
PROM1-205ENST00000504842 CLUAP1Q96AJ1 413 aa9.34□□□□□ -0.91
PROM1-205ENST00000504842 TRAK2O60296 914 aa9.33□□□□□ -0.92
PROM1-205ENST00000504842 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
PROM1-205ENST00000504842 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
PROM1-205ENST00000504842 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
PROM1-205ENST00000504842 RAD21O60216 631 aa9.32□□□□□ -0.92
PROM1-205ENST00000504842 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
PROM1-205ENST00000504842 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
PROM1-205ENST00000504842 PPP1R3GB7ZBB8 358 aa9.3□□□□□ -0.92
PROM1-205ENST00000504842 BHMG1C9JSJ3 638 aaPredicted RBP9.3□□□□□ -0.92
PROM1-205ENST00000504842 NLRP7Q8WX94 980 aa9.3□□□□□ -0.92
PROM1-205ENST00000504842 CLK2P49760 499 aaKnown RBP9.29□□□□□ -0.92
PROM1-205ENST00000504842 PRSS12P56730 875 aa9.29□□□□□ -0.92
PROM1-205ENST00000504842 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
PROM1-205ENST00000504842 ANKK1Q8NFD2 765 aa9.29□□□□□ -0.92
PROM1-205ENST00000504842 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
PROM1-205ENST00000504842 PROX2Q3B8N5 592 aa9.28□□□□□ -0.92
PROM1-205ENST00000504842 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
PROM1-205ENST00000504842 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
PROM1-205ENST00000504842 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
PROM1-205ENST00000504842 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.27□□□□□ -0.93
PROM1-205ENST00000504842 TBC1D2Q9BYX2 928 aa9.27□□□□□ -0.93
PROM1-205ENST00000504842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.26□□□□□ -0.93
PROM1-205ENST00000504842 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
PROM1-205ENST00000504842 RABGEF1Q9UJ41 708 aa9.26□□□□□ -0.93
PROM1-205ENST00000504842 COL9A1P20849 921 aa9.25□□□□□ -0.93
PROM1-205ENST00000504842 CCDC82Q8N4S0 544 aa9.25□□□□□ -0.93
PROM1-205ENST00000504842 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
PROM1-205ENST00000504842 TMEM259Q4ZIN3 620 aa9.23□□□□□ -0.93
PROM1-205ENST00000504842 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
PROM1-205ENST00000504842 RFC5P40937 340 aa9.22□□□□□ -0.93
PROM1-205ENST00000504842 SULF1Q8IWU6 871 aa9.22□□□□□ -0.93
PROM1-205ENST00000504842 ZNF777Q9ULD5 760 aaPredicted RBP9.22□□□□□ -0.93
PROM1-205ENST00000504842 RCCD1A6NED2 376 aa9.21□□□□□ -0.94
PROM1-205ENST00000504842 BCAMP50895 628 aa9.21□□□□□ -0.94
PROM1-205ENST00000504842 RIC3Q7Z5B4 369 aa9.21□□□□□ -0.94
PROM1-205ENST00000504842 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.94
PROM1-205ENST00000504842 CCDC97Q96F63 343 aaPredicted RBP9.21□□□□□ -0.94
PROM1-205ENST00000504842 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
PROM1-205ENST00000504842 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
PROM1-205ENST00000504842 POM121Q96HA1 1249 aa9.2□□□□□ -0.94
PROM1-205ENST00000504842 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
PROM1-205ENST00000504842 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
PROM1-205ENST00000504842 A0A0G2JS52 829 aa9.19□□□□□ -0.94
PROM1-205ENST00000504842 PPP2R2DQ66LE6 453 aa9.19□□□□□ -0.94
PROM1-205ENST00000504842 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
PROM1-205ENST00000504842 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
PROM1-205ENST00000504842 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
PROM1-205ENST00000504842 RGS20O76081 388 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 CD46P15529 392 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 ZFRQ96KR1 1074 aaKnown RBP9.18□□□□□ -0.94
PROM1-205ENST00000504842 EYA1Q99502 592 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 PRM3Q9NNZ6 103 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
PROM1-205ENST00000504842 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
PROM1-205ENST00000504842 DNAJB2P25686 324 aa9.17□□□□□ -0.94
PROM1-205ENST00000504842 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
PROM1-205ENST00000504842 IRX2Q9BZI1 471 aaPredicted RBP9.17□□□□□ -0.94
PROM1-205ENST00000504842 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
PROM1-205ENST00000504842 DDX11L8A8MPP1 907 aa9.16□□□□□ -0.94
PROM1-205ENST00000504842 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
PROM1-205ENST00000504842 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
PROM1-205ENST00000504842 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
PROM1-205ENST00000504842 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
PROM1-205ENST00000504842 ZNF330Q9Y3S2 320 aaPredicted RBP9.16□□□□□ -0.94
PROM1-205ENST00000504842 SPTLC1O15269 473 aa9.15□□□□□ -0.94
PROM1-205ENST00000504842 FAM198AQ9UFP1 575 aa9.15□□□□□ -0.94
PROM1-205ENST00000504842 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
PROM1-205ENST00000504842 RSBN1LQ6PCB5 846 aaPredicted RBP9.14□□□□□ -0.95
PROM1-205ENST00000504842 NYAP1Q6ZVC0 841 aa9.14□□□□□ -0.95
PROM1-205ENST00000504842 LRCH3Q96II8 777 aa9.14□□□□□ -0.95
PROM1-205ENST00000504842 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.14□□□□□ -0.95
PROM1-205ENST00000504842 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
PROM1-205ENST00000504842 ZBTB7CA1YPR0 619 aa9.13□□□□□ -0.95
PROM1-205ENST00000504842 GJA5P36382 358 aa9.13□□□□□ -0.95
PROM1-205ENST00000504842 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
PROM1-205ENST00000504842 CSPP1Q1MSJ5 1256 aa9.13□□□□□ -0.95
PROM1-205ENST00000504842 RSPH4AQ5TD94 716 aa9.13□□□□□ -0.95
PROM1-205ENST00000504842 TATDN2Q93075 761 aa9.13□□□□□ -0.95
PROM1-205ENST00000504842 WBP1LQ9NX94 342 aa9.13□□□□□ -0.95
PROM1-205ENST00000504842 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms