RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 RIMS2Q9UQ26 1411 aa26.49■■□□□ 1.83
DDR1-254ENST00000504679 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
DDR1-254ENST00000504679 PPP1R15AO75807 674 aaPredicted RBP26.49■■□□□ 1.83
DDR1-254ENST00000504679 SCAF11Q99590 1463 aaKnown RBP26.48■■□□□ 1.83
DDR1-254ENST00000504679 NUTM2DQ5VT03 806 aaPredicted RBP26.46■■□□□ 1.83
DDR1-254ENST00000504679 POLR1AO95602 1720 aaPredicted RBP26.45■■□□□ 1.83
DDR1-254ENST00000504679 BCANQ96GW7 911 aa26.45■■□□□ 1.82
DDR1-254ENST00000504679 ZFYVE9O95405 1425 aa26.45■■□□□ 1.82
DDR1-254ENST00000504679 VGFO15240 615 aaPredicted RBP26.44■■□□□ 1.82
DDR1-254ENST00000504679 SPATA31E1Q6ZUB1 1445 aa26.44■■□□□ 1.82
DDR1-254ENST00000504679 MED14O60244 1454 aa26.43■■□□□ 1.82
DDR1-254ENST00000504679 NPHP4O75161 1426 aaPredicted RBP26.43■■□□□ 1.82
DDR1-254ENST00000504679 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
DDR1-254ENST00000504679 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
DDR1-254ENST00000504679 NEUROD1Q13562 356 aa26.4■■□□□ 1.82
DDR1-254ENST00000504679 PLEKHG1Q9ULL1 1385 aa26.37■■□□□ 1.81
DDR1-254ENST00000504679 NEXMIFQ5QGS0 1516 aa26.36■■□□□ 1.81
DDR1-254ENST00000504679 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
DDR1-254ENST00000504679 IQGAP1P46940 1657 aa26.34■■□□□ 1.81
DDR1-254ENST00000504679 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
DDR1-254ENST00000504679 STAC3Q96MF2 364 aa26.34■■□□□ 1.81
DDR1-254ENST00000504679 DCAF11Q8TEB1 546 aa26.33■■□□□ 1.81
DDR1-254ENST00000504679 SLC26A8Q96RN1 970 aa26.33■■□□□ 1.81
DDR1-254ENST00000504679 PPLO60437 1756 aa26.31■■□□□ 1.8
DDR1-254ENST00000504679 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
DDR1-254ENST00000504679 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
DDR1-254ENST00000504679 KDM2AQ9Y2K7 1162 aa26.3■■□□□ 1.8
DDR1-254ENST00000504679 ADGRF5Q8IZF2 1346 aa26.27■■□□□ 1.8
DDR1-254ENST00000504679 IFT172Q9UG01 1749 aa26.25■■□□□ 1.79
DDR1-254ENST00000504679 L3MBTL2Q969R5 705 aa26.23■■□□□ 1.79
DDR1-254ENST00000504679 ZNF335Q9H4Z2 1342 aaPredicted RBP26.22■■□□□ 1.79
DDR1-254ENST00000504679 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
DDR1-254ENST00000504679 SETBP1Q9Y6X0 1596 aa26.21■■□□□ 1.79
DDR1-254ENST00000504679 MYOM2P54296 1465 aa26.2■■□□□ 1.78
DDR1-254ENST00000504679 KCNA6P17658 529 aa26.19■■□□□ 1.78
DDR1-254ENST00000504679 TONSLQ96HA7 1378 aa26.19■■□□□ 1.78
DDR1-254ENST00000504679 DIP2AQ14689 1571 aa26.18■■□□□ 1.78
DDR1-254ENST00000504679 PIK3R4Q99570 1358 aa26.17■■□□□ 1.78
DDR1-254ENST00000504679 C14orf93Q9H972 538 aaKnown RBP26.16■■□□□ 1.78
DDR1-254ENST00000504679 PIK3C2GO75747 1445 aa26.15■■□□□ 1.78
DDR1-254ENST00000504679 NRXN3Q9Y4C0 1643 aa26.15■■□□□ 1.78
DDR1-254ENST00000504679 NRXN1Q9ULB1 1477 aa26.15■■□□□ 1.78
DDR1-254ENST00000504679 ALKQ9UM73 1620 aa26.14■■□□□ 1.78
DDR1-254ENST00000504679 CFAP70Q5T0N1 1121 aa26.13■■□□□ 1.77
DDR1-254ENST00000504679 TIMELESSQ9UNS1 1208 aa26.13■■□□□ 1.77
DDR1-254ENST00000504679 AMOTL2Q9Y2J4 779 aa26.13■■□□□ 1.77
DDR1-254ENST00000504679 METP08581 1390 aa26.12■■□□□ 1.77
DDR1-254ENST00000504679 CHD2O14647 1828 aaKnown RBP26.1■■□□□ 1.77
DDR1-254ENST00000504679 LTBP4Q8N2S1 1624 aa26.09■■□□□ 1.77
DDR1-254ENST00000504679 PROSER2Q86WR7 435 aaPredicted RBP26.08■■□□□ 1.77
DDR1-254ENST00000504679 CPS1P31327 1500 aa26.08■■□□□ 1.77
DDR1-254ENST00000504679 TMEM132EQ6IEE7 984 aa26.07■■□□□ 1.76
DDR1-254ENST00000504679 CERKQ8TCT0 537 aa26.07■■□□□ 1.76
DDR1-254ENST00000504679 STRCP1A6NGW2 1772 aa26.05■■□□□ 1.76
DDR1-254ENST00000504679 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
DDR1-254ENST00000504679 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
DDR1-254ENST00000504679 SETD1AO15047 1707 aaKnown RBP26.04■■□□□ 1.76
DDR1-254ENST00000504679 LAMC1P11047 1609 aa26.03■■□□□ 1.76
DDR1-254ENST00000504679 STK26Q9P289 416 aa26.03■■□□□ 1.76
DDR1-254ENST00000504679 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
DDR1-254ENST00000504679 NKTRP30414 1462 aaKnown RBP25.99■■□□□ 1.75
DDR1-254ENST00000504679 LRPPRCP42704 1394 aaKnown RBP25.99■■□□□ 1.75
DDR1-254ENST00000504679 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
DDR1-254ENST00000504679 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
DDR1-254ENST00000504679 ABCC11Q96J66 1382 aa25.97■■□□□ 1.75
DDR1-254ENST00000504679 NBPF1Q3BBV0 1214 aa25.97■■□□□ 1.75
DDR1-254ENST00000504679 KIAA1210Q9ULL0 1709 aa25.97■■□□□ 1.75
DDR1-254ENST00000504679 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
DDR1-254ENST00000504679 RBM33Q96EV2 1170 aaKnown RBP25.96■■□□□ 1.75
DDR1-254ENST00000504679 TMEM94Q12767 1356 aa25.95■■□□□ 1.75
DDR1-254ENST00000504679 SIRT1Q96EB6 747 aa25.95■■□□□ 1.74
DDR1-254ENST00000504679 XRN1Q8IZH2 1706 aaKnown RBP25.94■■□□□ 1.74
DDR1-254ENST00000504679 C14orf37Q86TY3 774 aa25.94■■□□□ 1.74
DDR1-254ENST00000504679 TRAK1Q9UPV9 953 aa25.93■■□□□ 1.74
DDR1-254ENST00000504679 ASXL1Q8IXJ9 1541 aa25.93■■□□□ 1.74
DDR1-254ENST00000504679 IQSEC2Q5JU85 1478 aa25.92■■□□□ 1.74
DDR1-254ENST00000504679 NCOA3Q9Y6Q9 1424 aa25.92■■□□□ 1.74
DDR1-254ENST00000504679 ADGRB1O14514 1584 aa25.9■■□□□ 1.74
DDR1-254ENST00000504679 ROBO2Q9HCK4 1378 aa25.9■■□□□ 1.74
DDR1-254ENST00000504679 TECPR2O15040 1411 aa25.89■■□□□ 1.74
DDR1-254ENST00000504679 PTCH1Q13635 1447 aa25.89■■□□□ 1.74
DDR1-254ENST00000504679 ROCK2O75116 1388 aaKnown RBP25.89■■□□□ 1.74
DDR1-254ENST00000504679 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
DDR1-254ENST00000504679 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
DDR1-254ENST00000504679 POGKQ9P215 609 aa25.88■■□□□ 1.73
DDR1-254ENST00000504679 TRPM1Q7Z4N2 1603 aa25.88■■□□□ 1.73
DDR1-254ENST00000504679 FAM135BQ49AJ0 1406 aa25.86■■□□□ 1.73
DDR1-254ENST00000504679 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
DDR1-254ENST00000504679 MSH6P52701 1360 aa25.85■■□□□ 1.73
DDR1-254ENST00000504679 TOM1O60784 492 aa25.85■■□□□ 1.73
DDR1-254ENST00000504679 PRAM1Q96QH2 718 aa25.85■■□□□ 1.73
DDR1-254ENST00000504679 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
DDR1-254ENST00000504679 CARD11Q9BXL7 1154 aa25.84■■□□□ 1.73
DDR1-254ENST00000504679 UBAP1LF5GYI3 381 aa25.83■■□□□ 1.73
DDR1-254ENST00000504679 DLC1Q96QB1 1528 aa25.83■■□□□ 1.72
DDR1-254ENST00000504679 ATF3P18847 181 aa25.82■■□□□ 1.72
DDR1-254ENST00000504679 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
DDR1-254ENST00000504679 SAFB2Q14151 953 aaKnown RBP eCLIP25.8■■□□□ 1.72
DDR1-254ENST00000504679 CADPS2Q86UW7 1296 aa25.79■■□□□ 1.72
DDR1-254ENST00000504679 GPRASP1Q5JY77 1395 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms