RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
TPM3-217ENST00000504663 GPRASP1Q5JY77 1395 aa14.92□□□□□ -0.02
TPM3-217ENST00000504663 A2ML1A8K2U0 1454 aa14.92□□□□□ -0.02
TPM3-217ENST00000504663 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
TPM3-217ENST00000504663 IDI1Q13907 227 aa14.91□□□□□ -0.02
TPM3-217ENST00000504663 IQGAP1P46940 1657 aa14.9□□□□□ -0.02
TPM3-217ENST00000504663 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
TPM3-217ENST00000504663 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
TPM3-217ENST00000504663 TNRQ92752 1358 aa14.89□□□□□ -0.03
TPM3-217ENST00000504663 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
TPM3-217ENST00000504663 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
TPM3-217ENST00000504663 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
TPM3-217ENST00000504663 SETD1AO15047 1707 aaKnown RBP14.88□□□□□ -0.03
TPM3-217ENST00000504663 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
TPM3-217ENST00000504663 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
TPM3-217ENST00000504663 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
TPM3-217ENST00000504663 POLR1AO95602 1720 aaPredicted RBP14.86□□□□□ -0.03
TPM3-217ENST00000504663 NRXN3Q9Y4C0 1643 aa14.86□□□□□ -0.03
TPM3-217ENST00000504663 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
TPM3-217ENST00000504663 NLRP1Q9C000 1473 aa14.86□□□□□ -0.03
TPM3-217ENST00000504663 ADGRF5Q8IZF2 1346 aa14.86□□□□□ -0.03
TPM3-217ENST00000504663 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
TPM3-217ENST00000504663 KDM2AQ9Y2K7 1162 aa14.85□□□□□ -0.03
TPM3-217ENST00000504663 SETBP1Q9Y6X0 1596 aa14.85□□□□□ -0.03
TPM3-217ENST00000504663 CEBPAP49715 358 aaPredicted RBP14.84□□□□□ -0.03
TPM3-217ENST00000504663 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.04
TPM3-217ENST00000504663 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
TPM3-217ENST00000504663 ARHGAP23Q9P227 1491 aa14.82□□□□□ -0.04
TPM3-217ENST00000504663 CEP170BQ9Y4F5 1589 aaPredicted RBP14.81□□□□□ -0.04
TPM3-217ENST00000504663 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
TPM3-217ENST00000504663 ZNF326Q5BKZ1 582 aaKnown RBP14.81□□□□□ -0.04
TPM3-217ENST00000504663 ESF1Q9H501 851 aaKnown RBP14.81□□□□□ -0.04
TPM3-217ENST00000504663 USP47Q96K76 1375 aa14.81□□□□□ -0.04
TPM3-217ENST00000504663 PTPRMP28827 1452 aa14.81□□□□□ -0.04
TPM3-217ENST00000504663 SLIT1O75093 1534 aa14.81□□□□□ -0.04
TPM3-217ENST00000504663 HSPA5P11021 654 aaKnown RBP14.8□□□□□ -0.04
TPM3-217ENST00000504663 ROCK2O75116 1388 aaKnown RBP14.79□□□□□ -0.04
TPM3-217ENST00000504663 RIMS2Q9UQ26 1411 aa14.79□□□□□ -0.04
TPM3-217ENST00000504663 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
TPM3-217ENST00000504663 HIRIP3Q9BW71 556 aaPredicted RBP14.77□□□□□ -0.05
TPM3-217ENST00000504663 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
TPM3-217ENST00000504663 ALKQ9UM73 1620 aa14.77□□□□□ -0.05
TPM3-217ENST00000504663 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
TPM3-217ENST00000504663 TMEM2Q9UHN6 1383 aa14.75□□□□□ -0.05
TPM3-217ENST00000504663 ZBTB22O15209 634 aa14.75□□□□□ -0.05
TPM3-217ENST00000504663 EIF4G2P78344 907 aaKnown RBP eCLIP14.75□□□□□ -0.05
TPM3-217ENST00000504663 CFAP70Q5T0N1 1121 aa14.74□□□□□ -0.05
TPM3-217ENST00000504663 CARD11Q9BXL7 1154 aa14.74□□□□□ -0.05
TPM3-217ENST00000504663 C14orf93Q9H972 538 aaKnown RBP14.74□□□□□ -0.05
TPM3-217ENST00000504663 C11orf95C9JLR9 678 aaPredicted RBP14.73□□□□□ -0.05
TPM3-217ENST00000504663 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
TPM3-217ENST00000504663 MED14O60244 1454 aa14.72□□□□□ -0.05
TPM3-217ENST00000504663 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
TPM3-217ENST00000504663 KNDC1Q76NI1 1749 aa14.72□□□□□ -0.05
TPM3-217ENST00000504663 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
TPM3-217ENST00000504663 ADAMTS13Q76LX8 1427 aa14.71□□□□□ -0.05
TPM3-217ENST00000504663 WASHC2AQ641Q2 1341 aa14.7□□□□□ -0.06
TPM3-217ENST00000504663 QRICH2Q9H0J4 1663 aa14.69□□□□□ -0.06
TPM3-217ENST00000504663 VGFO15240 615 aaPredicted RBP14.69□□□□□ -0.06
TPM3-217ENST00000504663 TESK2Q96S53 571 aa14.69□□□□□ -0.06
TPM3-217ENST00000504663 CCDC7Q96M83 1385 aa14.69□□□□□ -0.06
TPM3-217ENST00000504663 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
TPM3-217ENST00000504663 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
TPM3-217ENST00000504663 LTKP29376 864 aa14.67□□□□□ -0.06
TPM3-217ENST00000504663 PLEKHG1Q9ULL1 1385 aa14.67□□□□□ -0.06
TPM3-217ENST00000504663 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
TPM3-217ENST00000504663 MYOM1P52179 1685 aa14.66□□□□□ -0.06
TPM3-217ENST00000504663 DIP2AQ14689 1571 aa14.66□□□□□ -0.06
TPM3-217ENST00000504663 KIF7Q2M1P5 1343 aa14.66□□□□□ -0.06
TPM3-217ENST00000504663 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
TPM3-217ENST00000504663 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
TPM3-217ENST00000504663 CPS1P31327 1500 aa14.65□□□□□ -0.06
TPM3-217ENST00000504663 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
TPM3-217ENST00000504663 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
TPM3-217ENST00000504663 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
TPM3-217ENST00000504663 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
TPM3-217ENST00000504663 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.63□□□□□ -0.07
TPM3-217ENST00000504663 TECPR2O15040 1411 aa14.63□□□□□ -0.07
TPM3-217ENST00000504663 METP08581 1390 aa14.62□□□□□ -0.07
TPM3-217ENST00000504663 TULP4Q9NRJ4 1543 aa14.62□□□□□ -0.07
TPM3-217ENST00000504663 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
TPM3-217ENST00000504663 LRPPRCP42704 1394 aaKnown RBP14.6□□□□□ -0.07
TPM3-217ENST00000504663 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
TPM3-217ENST00000504663 PTPRUQ92729 1446 aa14.6□□□□□ -0.07
TPM3-217ENST00000504663 LMTK3Q96Q04 1460 aa14.59□□□□□ -0.07
TPM3-217ENST00000504663 THEMISQ8N1K5 641 aaPredicted RBP14.59□□□□□ -0.07
TPM3-217ENST00000504663 TXNDC2Q86VQ3 553 aa14.57□□□□□ -0.08
TPM3-217ENST00000504663 ABCC11Q96J66 1382 aa14.57□□□□□ -0.08
TPM3-217ENST00000504663 DDX10Q13206 875 aaKnown RBP14.56□□□□□ -0.08
TPM3-217ENST00000504663 TRAK1Q9UPV9 953 aa14.56□□□□□ -0.08
TPM3-217ENST00000504663 CHD2O14647 1828 aaKnown RBP14.56□□□□□ -0.08
TPM3-217ENST00000504663 ADGRB2O60241 1585 aa14.56□□□□□ -0.08
TPM3-217ENST00000504663 CENPJQ9HC77 1338 aaPredicted RBP14.55□□□□□ -0.08
TPM3-217ENST00000504663 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
TPM3-217ENST00000504663 NWD1Q149M9 1564 aa14.55□□□□□ -0.08
TPM3-217ENST00000504663 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
TPM3-217ENST00000504663 STRCQ7RTU9 1775 aa14.55□□□□□ -0.08
TPM3-217ENST00000504663 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
TPM3-217ENST00000504663 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
TPM3-217ENST00000504663 HDGFP51858 240 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms