RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 ZFYVE9O95405 1425 aa20.27■□□□□ 0.84
DDR1-253ENST00000504651 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
DDR1-253ENST00000504651 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
DDR1-253ENST00000504651 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
DDR1-253ENST00000504651 STRCQ7RTU9 1775 aa20.25■□□□□ 0.83
DDR1-253ENST00000504651 EID1Q9Y6B2 187 aa20.22■□□□□ 0.83
DDR1-253ENST00000504651 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
DDR1-253ENST00000504651 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
DDR1-253ENST00000504651 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
DDR1-253ENST00000504651 PPP1R15AO75807 674 aaPredicted RBP20.21■□□□□ 0.83
DDR1-253ENST00000504651 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
DDR1-253ENST00000504651 MYOM2P54296 1465 aa20.21■□□□□ 0.83
DDR1-253ENST00000504651 HDGFP51858 240 aaKnown RBP20.2■□□□□ 0.82
DDR1-253ENST00000504651 ANKLE2Q86XL3 938 aa20.2■□□□□ 0.82
DDR1-253ENST00000504651 NUTM2DQ5VT03 806 aaPredicted RBP20.19■□□□□ 0.82
DDR1-253ENST00000504651 TXNDC2Q86VQ3 553 aa20.19■□□□□ 0.82
DDR1-253ENST00000504651 LTKP29376 864 aa20.18■□□□□ 0.82
DDR1-253ENST00000504651 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
DDR1-253ENST00000504651 MED14O60244 1454 aa20.18■□□□□ 0.82
DDR1-253ENST00000504651 NPHP4O75161 1426 aaPredicted RBP20.17■□□□□ 0.82
DDR1-253ENST00000504651 PLEKHG1Q9ULL1 1385 aa20.16■□□□□ 0.82
DDR1-253ENST00000504651 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
DDR1-253ENST00000504651 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
DDR1-253ENST00000504651 DCAF11Q8TEB1 546 aa20.15■□□□□ 0.82
DDR1-253ENST00000504651 LAMC1P11047 1609 aa20.14■□□□□ 0.81
DDR1-253ENST00000504651 VGFO15240 615 aaPredicted RBP20.14■□□□□ 0.81
DDR1-253ENST00000504651 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
DDR1-253ENST00000504651 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
DDR1-253ENST00000504651 L3MBTL2Q969R5 705 aa20.13■□□□□ 0.81
DDR1-253ENST00000504651 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
DDR1-253ENST00000504651 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
DDR1-253ENST00000504651 PIK3C2GO75747 1445 aa20.11■□□□□ 0.81
DDR1-253ENST00000504651 SETD1AO15047 1707 aaKnown RBP20.11■□□□□ 0.81
DDR1-253ENST00000504651 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
DDR1-253ENST00000504651 BCANQ96GW7 911 aa20.11■□□□□ 0.81
DDR1-253ENST00000504651 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
DDR1-253ENST00000504651 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
DDR1-253ENST00000504651 ADAMTS13Q76LX8 1427 aa20.08■□□□□ 0.8
DDR1-253ENST00000504651 PRAG1Q86YV5 1406 aa20.08■□□□□ 0.8
DDR1-253ENST00000504651 KIAA1210Q9ULL0 1709 aa20.07■□□□□ 0.8
DDR1-253ENST00000504651 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
DDR1-253ENST00000504651 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
DDR1-253ENST00000504651 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
DDR1-253ENST00000504651 SLC26A8Q96RN1 970 aa20.03■□□□□ 0.8
DDR1-253ENST00000504651 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
DDR1-253ENST00000504651 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
DDR1-253ENST00000504651 NWD1Q149M9 1564 aa20■□□□□ 0.79
DDR1-253ENST00000504651 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
DDR1-253ENST00000504651 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
DDR1-253ENST00000504651 KNDC1Q76NI1 1749 aa19.98■□□□□ 0.79
DDR1-253ENST00000504651 XRN1Q8IZH2 1706 aaKnown RBP19.98■□□□□ 0.79
DDR1-253ENST00000504651 RALGAPBQ86X10 1494 aa19.98■□□□□ 0.79
DDR1-253ENST00000504651 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
DDR1-253ENST00000504651 ADGRB1O14514 1584 aa19.97■□□□□ 0.79
DDR1-253ENST00000504651 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
DDR1-253ENST00000504651 STRCP1A6NGW2 1772 aa19.97■□□□□ 0.79
DDR1-253ENST00000504651 METP08581 1390 aa19.96■□□□□ 0.79
DDR1-253ENST00000504651 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
DDR1-253ENST00000504651 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
DDR1-253ENST00000504651 ROCK2O75116 1388 aaKnown RBP19.93■□□□□ 0.78
DDR1-253ENST00000504651 ZNF335Q9H4Z2 1342 aaPredicted RBP19.92■□□□□ 0.78
DDR1-253ENST00000504651 YTHDC2Q9H6S0 1430 aaKnown RBP19.92■□□□□ 0.78
DDR1-253ENST00000504651 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
DDR1-253ENST00000504651 CPS1P31327 1500 aa19.92■□□□□ 0.78
DDR1-253ENST00000504651 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
DDR1-253ENST00000504651 ARHGEF28Q8N1W1 1705 aaKnown RBP19.9■□□□□ 0.78
DDR1-253ENST00000504651 LRPPRCP42704 1394 aaKnown RBP19.9■□□□□ 0.78
DDR1-253ENST00000504651 KCNA6P17658 529 aa19.88■□□□□ 0.77
DDR1-253ENST00000504651 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
DDR1-253ENST00000504651 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
DDR1-253ENST00000504651 DLC1Q96QB1 1528 aa19.87■□□□□ 0.77
DDR1-253ENST00000504651 TECPR2O15040 1411 aa19.87■□□□□ 0.77
DDR1-253ENST00000504651 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
DDR1-253ENST00000504651 GPRASP1Q5JY77 1395 aa19.87■□□□□ 0.77
DDR1-253ENST00000504651 AMOTL2Q9Y2J4 779 aa19.87■□□□□ 0.77
DDR1-253ENST00000504651 STK26Q9P289 416 aa19.86■□□□□ 0.77
DDR1-253ENST00000504651 ABCC11Q96J66 1382 aa19.84■□□□□ 0.77
DDR1-253ENST00000504651 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
DDR1-253ENST00000504651 XIRP1Q702N8 1843 aaKnown RBP19.83■□□□□ 0.77
DDR1-253ENST00000504651 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.77
DDR1-253ENST00000504651 TRAK1Q9UPV9 953 aa19.82■□□□□ 0.76
DDR1-253ENST00000504651 ROBO2Q9HCK4 1378 aa19.82■□□□□ 0.76
DDR1-253ENST00000504651 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
DDR1-253ENST00000504651 QRICH2Q9H0J4 1663 aa19.81■□□□□ 0.76
DDR1-253ENST00000504651 NALCNQ8IZF0 1738 aa19.81■□□□□ 0.76
DDR1-253ENST00000504651 EIF3AQ14152 1382 aaKnown RBP19.81■□□□□ 0.76
DDR1-253ENST00000504651 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
DDR1-253ENST00000504651 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
DDR1-253ENST00000504651 TMEM94Q12767 1356 aa19.77■□□□□ 0.76
DDR1-253ENST00000504651 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.76
DDR1-253ENST00000504651 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
DDR1-253ENST00000504651 USP47Q96K76 1375 aa19.76■□□□□ 0.75
DDR1-253ENST00000504651 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
DDR1-253ENST00000504651 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
DDR1-253ENST00000504651 POGKQ9P215 609 aa19.75■□□□□ 0.75
DDR1-253ENST00000504651 WAPLQ7Z5K2 1190 aa19.74■□□□□ 0.75
DDR1-253ENST00000504651 RBM33Q96EV2 1170 aaKnown RBP19.74■□□□□ 0.75
DDR1-253ENST00000504651 ADGRL3Q9HAR2 1447 aa19.74■□□□□ 0.75
DDR1-253ENST00000504651 NCOA3Q9Y6Q9 1424 aa19.74■□□□□ 0.75
DDR1-253ENST00000504651 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms