RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 MYOM2P54296 1465 aa16.22■□□□□ 0.19
TRIO-206ENST00000504606 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.18
TRIO-206ENST00000504606 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
TRIO-206ENST00000504606 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
TRIO-206ENST00000504606 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
TRIO-206ENST00000504606 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
TRIO-206ENST00000504606 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
TRIO-206ENST00000504606 ADGRF5Q8IZF2 1346 aa16.18■□□□□ 0.18
TRIO-206ENST00000504606 VGFO15240 615 aaPredicted RBP16.17■□□□□ 0.18
TRIO-206ENST00000504606 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
TRIO-206ENST00000504606 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
TRIO-206ENST00000504606 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
TRIO-206ENST00000504606 TMEM2Q9UHN6 1383 aa16.15■□□□□ 0.18
TRIO-206ENST00000504606 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
TRIO-206ENST00000504606 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
TRIO-206ENST00000504606 HDGFP51858 240 aaKnown RBP16.14■□□□□ 0.17
TRIO-206ENST00000504606 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRIO-206ENST00000504606 PIK3C2GO75747 1445 aa16.13■□□□□ 0.17
TRIO-206ENST00000504606 SLIT1O75093 1534 aa16.13■□□□□ 0.17
TRIO-206ENST00000504606 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
TRIO-206ENST00000504606 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
TRIO-206ENST00000504606 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
TRIO-206ENST00000504606 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
TRIO-206ENST00000504606 TXNDC2Q86VQ3 553 aa16.1■□□□□ 0.17
TRIO-206ENST00000504606 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
TRIO-206ENST00000504606 EID1Q9Y6B2 187 aa16.1■□□□□ 0.17
TRIO-206ENST00000504606 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
TRIO-206ENST00000504606 LAMC1P11047 1609 aa16.08■□□□□ 0.17
TRIO-206ENST00000504606 LTKP29376 864 aa16.08■□□□□ 0.16
TRIO-206ENST00000504606 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
TRIO-206ENST00000504606 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
TRIO-206ENST00000504606 GPRASP1Q5JY77 1395 aa16.07■□□□□ 0.16
TRIO-206ENST00000504606 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
TRIO-206ENST00000504606 BCANQ96GW7 911 aa16.06■□□□□ 0.16
TRIO-206ENST00000504606 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
TRIO-206ENST00000504606 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
TRIO-206ENST00000504606 PLEKHG1Q9ULL1 1385 aa16.05■□□□□ 0.16
TRIO-206ENST00000504606 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
TRIO-206ENST00000504606 NRXN3Q9Y4C0 1643 aa16.05■□□□□ 0.16
TRIO-206ENST00000504606 EIF4G2P78344 907 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRIO-206ENST00000504606 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
TRIO-206ENST00000504606 USP47Q96K76 1375 aa16.03■□□□□ 0.16
TRIO-206ENST00000504606 LMTK3Q96Q04 1460 aa16.03■□□□□ 0.16
TRIO-206ENST00000504606 ADGRB1O14514 1584 aa16.02■□□□□ 0.16
TRIO-206ENST00000504606 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.16
TRIO-206ENST00000504606 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.15
TRIO-206ENST00000504606 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
TRIO-206ENST00000504606 ASXL1Q8IXJ9 1541 aa16.01■□□□□ 0.15
TRIO-206ENST00000504606 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
TRIO-206ENST00000504606 HIRIP3Q9BW71 556 aaPredicted RBP16.01■□□□□ 0.15
TRIO-206ENST00000504606 ADAMTS13Q76LX8 1427 aa16.01■□□□□ 0.15
TRIO-206ENST00000504606 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
TRIO-206ENST00000504606 HSPA2P54652 639 aa15.99■□□□□ 0.15
TRIO-206ENST00000504606 NCKAP5LQ9HCH0 1330 aa15.97■□□□□ 0.15
TRIO-206ENST00000504606 DIP2AQ14689 1571 aa15.97■□□□□ 0.15
TRIO-206ENST00000504606 NPHP4O75161 1426 aaPredicted RBP15.97■□□□□ 0.15
TRIO-206ENST00000504606 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
TRIO-206ENST00000504606 MED14O60244 1454 aa15.97■□□□□ 0.15
TRIO-206ENST00000504606 TRAK1Q9UPV9 953 aa15.96■□□□□ 0.15
TRIO-206ENST00000504606 METP08581 1390 aa15.96■□□□□ 0.15
TRIO-206ENST00000504606 EIF3AQ14152 1382 aaKnown RBP15.96■□□□□ 0.15
TRIO-206ENST00000504606 YTHDC2Q9H6S0 1430 aaKnown RBP15.95■□□□□ 0.14
TRIO-206ENST00000504606 ST20-MTHFSA0A0A6YYL1 179 aa15.95■□□□□ 0.14
TRIO-206ENST00000504606 STK26Q9P289 416 aa15.95■□□□□ 0.14
TRIO-206ENST00000504606 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
TRIO-206ENST00000504606 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
TRIO-206ENST00000504606 ARHGEF28Q8N1W1 1705 aaKnown RBP15.93■□□□□ 0.14
TRIO-206ENST00000504606 KNDC1Q76NI1 1749 aa15.91■□□□□ 0.14
TRIO-206ENST00000504606 ABCC11Q96J66 1382 aa15.9■□□□□ 0.14
TRIO-206ENST00000504606 DLC1Q96QB1 1528 aa15.9■□□□□ 0.14
TRIO-206ENST00000504606 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
TRIO-206ENST00000504606 PIK3R4Q99570 1358 aa15.89■□□□□ 0.13
TRIO-206ENST00000504606 PTPRUQ92729 1446 aa15.89■□□□□ 0.13
TRIO-206ENST00000504606 STRCQ7RTU9 1775 aa15.89■□□□□ 0.13
TRIO-206ENST00000504606 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
TRIO-206ENST00000504606 TESK2Q96S53 571 aa15.88■□□□□ 0.13
TRIO-206ENST00000504606 CPS1P31327 1500 aa15.88■□□□□ 0.13
TRIO-206ENST00000504606 TECPR2O15040 1411 aa15.87■□□□□ 0.13
TRIO-206ENST00000504606 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
TRIO-206ENST00000504606 POGKQ9P215 609 aa15.87■□□□□ 0.13
TRIO-206ENST00000504606 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
TRIO-206ENST00000504606 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
TRIO-206ENST00000504606 CHD2O14647 1828 aaKnown RBP15.85■□□□□ 0.13
TRIO-206ENST00000504606 C11orf95C9JLR9 678 aaPredicted RBP15.85■□□□□ 0.13
TRIO-206ENST00000504606 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRIO-206ENST00000504606 SBNO2Q9Y2G9 1366 aa15.85■□□□□ 0.13
TRIO-206ENST00000504606 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
TRIO-206ENST00000504606 TMF1P82094 1093 aa15.84■□□□□ 0.13
TRIO-206ENST00000504606 WAPLQ7Z5K2 1190 aa15.84■□□□□ 0.13
TRIO-206ENST00000504606 SIRT1Q96EB6 747 aa15.84■□□□□ 0.13
TRIO-206ENST00000504606 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
TRIO-206ENST00000504606 PLEKHH1Q9ULM0 1364 aa15.84■□□□□ 0.13
TRIO-206ENST00000504606 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
TRIO-206ENST00000504606 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
TRIO-206ENST00000504606 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.12
TRIO-206ENST00000504606 WASHC2AQ641Q2 1341 aa15.83■□□□□ 0.12
TRIO-206ENST00000504606 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
TRIO-206ENST00000504606 DISP3Q9P2K9 1392 aa15.83■□□□□ 0.12
TRIO-206ENST00000504606 PTCH1Q13635 1447 aa15.83■□□□□ 0.12
TRIO-206ENST00000504606 KCNA6P17658 529 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms