RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
COPS4-203ENST00000504274 CLCN1P35523 988 aa11.53□□□□□ -0.56
COPS4-203ENST00000504274 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
COPS4-203ENST00000504274 DAXXQ9UER7 740 aaPredicted RBP11.53□□□□□ -0.56
COPS4-203ENST00000504274 GOLGA8CPA6NN73 597 aa11.51□□□□□ -0.57
COPS4-203ENST00000504274 SPNS2Q8IVW8 549 aa11.51□□□□□ -0.57
COPS4-203ENST00000504274 KDM4CQ9H3R0 1056 aa11.51□□□□□ -0.57
COPS4-203ENST00000504274 WNT2BQ93097 391 aa11.5□□□□□ -0.57
COPS4-203ENST00000504274 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
COPS4-203ENST00000504274 MS4A1P11836 297 aa11.49□□□□□ -0.57
COPS4-203ENST00000504274 BCAMP50895 628 aa11.49□□□□□ -0.57
COPS4-203ENST00000504274 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
COPS4-203ENST00000504274 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
COPS4-203ENST00000504274 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
COPS4-203ENST00000504274 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
COPS4-203ENST00000504274 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.48□□□□□ -0.57
COPS4-203ENST00000504274 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
COPS4-203ENST00000504274 DDX11L8A8MPP1 907 aa11.47□□□□□ -0.57
COPS4-203ENST00000504274 SLC10A3P09131 477 aa11.47□□□□□ -0.57
COPS4-203ENST00000504274 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
COPS4-203ENST00000504274 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
COPS4-203ENST00000504274 RNF40O75150 1001 aa11.45□□□□□ -0.58
COPS4-203ENST00000504274 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
COPS4-203ENST00000504274 SLF2Q8IX21 1173 aa11.44□□□□□ -0.58
COPS4-203ENST00000504274 CD46P15529 392 aa11.43□□□□□ -0.58
COPS4-203ENST00000504274 FAM117AQ9C073 453 aa11.43□□□□□ -0.58
COPS4-203ENST00000504274 SULF1Q8IWU6 871 aa11.42□□□□□ -0.58
COPS4-203ENST00000504274 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
COPS4-203ENST00000504274 HPS5Q9UPZ3 1129 aa11.42□□□□□ -0.58
COPS4-203ENST00000504274 BEGAINQ9BUH8 593 aa11.4□□□□□ -0.58
COPS4-203ENST00000504274 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
COPS4-203ENST00000504274 TSR3Q9UJK0 312 aaKnown RBP11.39□□□□□ -0.59
COPS4-203ENST00000504274 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
COPS4-203ENST00000504274 CFHP08603 1231 aa11.37□□□□□ -0.59
COPS4-203ENST00000504274 GCGRP47871 477 aa11.37□□□□□ -0.59
COPS4-203ENST00000504274 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
COPS4-203ENST00000504274 PPP4CP60510 307 aa11.37□□□□□ -0.59
COPS4-203ENST00000504274 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
COPS4-203ENST00000504274 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
COPS4-203ENST00000504274 PTPN5P54829 565 aa11.36□□□□□ -0.59
COPS4-203ENST00000504274 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
COPS4-203ENST00000504274 APLP1P51693 650 aa11.35□□□□□ -0.59
COPS4-203ENST00000504274 RSPH4AQ5TD94 716 aa11.35□□□□□ -0.59
COPS4-203ENST00000504274 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
COPS4-203ENST00000504274 SPIRE2Q8WWL2 714 aa11.31□□□□□ -0.6
COPS4-203ENST00000504274 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
COPS4-203ENST00000504274 KDM4AO75164 1064 aa11.3□□□□□ -0.6
COPS4-203ENST00000504274 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
COPS4-203ENST00000504274 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
COPS4-203ENST00000504274 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
COPS4-203ENST00000504274 FUT2Q10981 343 aa11.28□□□□□ -0.6
COPS4-203ENST00000504274 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
COPS4-203ENST00000504274 HLA-CQ95604 372 aa11.28□□□□□ -0.6
COPS4-203ENST00000504274 NDUFV2P19404 249 aa11.26□□□□□ -0.61
COPS4-203ENST00000504274 PUS10Q3MIT2 529 aaKnown RBP11.26□□□□□ -0.61
COPS4-203ENST00000504274 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
COPS4-203ENST00000504274 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
COPS4-203ENST00000504274 HOXA2O43364 376 aa11.25□□□□□ -0.61
COPS4-203ENST00000504274 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
COPS4-203ENST00000504274 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
COPS4-203ENST00000504274 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
COPS4-203ENST00000504274 USP46P62068 366 aa11.23□□□□□ -0.61
COPS4-203ENST00000504274 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
COPS4-203ENST00000504274 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
COPS4-203ENST00000504274 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
COPS4-203ENST00000504274 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
COPS4-203ENST00000504274 BLOC1S3Q6QNY0 202 aa11.22□□□□□ -0.61
COPS4-203ENST00000504274 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
COPS4-203ENST00000504274 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
COPS4-203ENST00000504274 MORN1Q5T089 497 aa11.21□□□□□ -0.61
COPS4-203ENST00000504274 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
COPS4-203ENST00000504274 COPS2P61201 443 aa11.2□□□□□ -0.62
COPS4-203ENST00000504274 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
COPS4-203ENST00000504274 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
COPS4-203ENST00000504274 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
COPS4-203ENST00000504274 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
COPS4-203ENST00000504274 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
COPS4-203ENST00000504274 PCDHGC3Q9UN70 934 aa11.2□□□□□ -0.62
COPS4-203ENST00000504274 SPTLC1O15269 473 aa11.19□□□□□ -0.62
COPS4-203ENST00000504274 SKIV2LQ15477 1246 aaKnown RBP11.19□□□□□ -0.62
COPS4-203ENST00000504274 SLC27A5Q9Y2P5 690 aa11.19□□□□□ -0.62
COPS4-203ENST00000504274 MTRQ99707 1265 aa11.18□□□□□ -0.62
COPS4-203ENST00000504274 PCDHB15Q9Y5E8 787 aa11.18□□□□□ -0.62
COPS4-203ENST00000504274 FDX1P10109 184 aa11.17□□□□□ -0.62
COPS4-203ENST00000504274 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
COPS4-203ENST00000504274 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
COPS4-203ENST00000504274 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
COPS4-203ENST00000504274 SCUBE3Q8IX30 993 aa11.16□□□□□ -0.62
COPS4-203ENST00000504274 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
COPS4-203ENST00000504274 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
COPS4-203ENST00000504274 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
COPS4-203ENST00000504274 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
COPS4-203ENST00000504274 GJA5P36382 358 aa11.14□□□□□ -0.63
COPS4-203ENST00000504274 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
COPS4-203ENST00000504274 NR1I2O75469 434 aa11.13□□□□□ -0.63
COPS4-203ENST00000504274 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
COPS4-203ENST00000504274 QPCTQ16769 361 aa11.12□□□□□ -0.63
COPS4-203ENST00000504274 RNF19BQ6ZMZ0 732 aa11.12□□□□□ -0.63
COPS4-203ENST00000504274 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
COPS4-203ENST00000504274 THAP11Q96EK4 314 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms