RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.76
CYSTM1-202ENST00000504227 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
CYSTM1-202ENST00000504227 EID1Q9Y6B2 187 aa19.82■□□□□ 0.76
CYSTM1-202ENST00000504227 RIMS2Q9UQ26 1411 aa19.82■□□□□ 0.76
CYSTM1-202ENST00000504227 MYO5BQ9ULV0 1848 aa19.81■□□□□ 0.76
CYSTM1-202ENST00000504227 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
CYSTM1-202ENST00000504227 ZNF142P52746 1687 aaPredicted RBP19.79■□□□□ 0.76
CYSTM1-202ENST00000504227 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
CYSTM1-202ENST00000504227 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
CYSTM1-202ENST00000504227 ZFYVE9O95405 1425 aa19.77■□□□□ 0.76
CYSTM1-202ENST00000504227 NEXMIFQ5QGS0 1516 aa19.77■□□□□ 0.76
CYSTM1-202ENST00000504227 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.76
CYSTM1-202ENST00000504227 MYOM2P54296 1465 aa19.76■□□□□ 0.75
CYSTM1-202ENST00000504227 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
CYSTM1-202ENST00000504227 SLIT1O75093 1534 aa19.76■□□□□ 0.75
CYSTM1-202ENST00000504227 PPLO60437 1756 aa19.75■□□□□ 0.75
CYSTM1-202ENST00000504227 LTKP29376 864 aa19.75■□□□□ 0.75
CYSTM1-202ENST00000504227 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
CYSTM1-202ENST00000504227 BCANQ96GW7 911 aa19.74■□□□□ 0.75
CYSTM1-202ENST00000504227 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
CYSTM1-202ENST00000504227 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
CYSTM1-202ENST00000504227 HSPA2P54652 639 aa19.71■□□□□ 0.75
CYSTM1-202ENST00000504227 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
CYSTM1-202ENST00000504227 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
CYSTM1-202ENST00000504227 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
CYSTM1-202ENST00000504227 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
CYSTM1-202ENST00000504227 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
CYSTM1-202ENST00000504227 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
CYSTM1-202ENST00000504227 PLEKHG1Q9ULL1 1385 aa19.69■□□□□ 0.74
CYSTM1-202ENST00000504227 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
CYSTM1-202ENST00000504227 CFAP70Q5T0N1 1121 aa19.68■□□□□ 0.74
CYSTM1-202ENST00000504227 NCKAP5LQ9HCH0 1330 aa19.68■□□□□ 0.74
CYSTM1-202ENST00000504227 NBPF1Q3BBV0 1214 aa19.64■□□□□ 0.73
CYSTM1-202ENST00000504227 ROCK2O75116 1388 aaKnown RBP19.64■□□□□ 0.73
CYSTM1-202ENST00000504227 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
CYSTM1-202ENST00000504227 SLC26A8Q96RN1 970 aa19.62■□□□□ 0.73
CYSTM1-202ENST00000504227 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
CYSTM1-202ENST00000504227 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
CYSTM1-202ENST00000504227 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
CYSTM1-202ENST00000504227 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
CYSTM1-202ENST00000504227 MED14O60244 1454 aa19.6■□□□□ 0.73
CYSTM1-202ENST00000504227 KIAA1210Q9ULL0 1709 aa19.59■□□□□ 0.73
CYSTM1-202ENST00000504227 TRPM1Q7Z4N2 1603 aa19.59■□□□□ 0.73
CYSTM1-202ENST00000504227 ALKQ9UM73 1620 aa19.59■□□□□ 0.73
CYSTM1-202ENST00000504227 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
CYSTM1-202ENST00000504227 ADAMTS13Q76LX8 1427 aa19.59■□□□□ 0.73
CYSTM1-202ENST00000504227 GPRASP1Q5JY77 1395 aa19.58■□□□□ 0.73
CYSTM1-202ENST00000504227 LAMC1P11047 1609 aa19.57■□□□□ 0.72
CYSTM1-202ENST00000504227 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
CYSTM1-202ENST00000504227 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
CYSTM1-202ENST00000504227 NRXN3Q9Y4C0 1643 aa19.55■□□□□ 0.72
CYSTM1-202ENST00000504227 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
CYSTM1-202ENST00000504227 METP08581 1390 aa19.55■□□□□ 0.72
CYSTM1-202ENST00000504227 DIP2AQ14689 1571 aa19.54■□□□□ 0.72
CYSTM1-202ENST00000504227 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
CYSTM1-202ENST00000504227 STK26Q9P289 416 aa19.54■□□□□ 0.72
CYSTM1-202ENST00000504227 PIK3R4Q99570 1358 aa19.52■□□□□ 0.72
CYSTM1-202ENST00000504227 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
CYSTM1-202ENST00000504227 TRAK1Q9UPV9 953 aa19.51■□□□□ 0.71
CYSTM1-202ENST00000504227 LRPPRCP42704 1394 aaKnown RBP19.51■□□□□ 0.71
CYSTM1-202ENST00000504227 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
CYSTM1-202ENST00000504227 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
CYSTM1-202ENST00000504227 USP47Q96K76 1375 aa19.5■□□□□ 0.71
CYSTM1-202ENST00000504227 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
CYSTM1-202ENST00000504227 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
CYSTM1-202ENST00000504227 AMOTL2Q9Y2J4 779 aa19.49■□□□□ 0.71
CYSTM1-202ENST00000504227 EIF3AQ14152 1382 aaKnown RBP19.48■□□□□ 0.71
CYSTM1-202ENST00000504227 ASXL1Q8IXJ9 1541 aa19.48■□□□□ 0.71
CYSTM1-202ENST00000504227 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
CYSTM1-202ENST00000504227 KCNA6P17658 529 aa19.47■□□□□ 0.71
CYSTM1-202ENST00000504227 SIRT1Q96EB6 747 aa19.46■□□□□ 0.71
CYSTM1-202ENST00000504227 POGKQ9P215 609 aa19.46■□□□□ 0.71
CYSTM1-202ENST00000504227 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
CYSTM1-202ENST00000504227 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
CYSTM1-202ENST00000504227 PRAM1Q96QH2 718 aa19.43■□□□□ 0.7
CYSTM1-202ENST00000504227 CENPJQ9HC77 1338 aaPredicted RBP19.43■□□□□ 0.7
CYSTM1-202ENST00000504227 TECPR2O15040 1411 aa19.42■□□□□ 0.7
CYSTM1-202ENST00000504227 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
CYSTM1-202ENST00000504227 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
CYSTM1-202ENST00000504227 WAPLQ7Z5K2 1190 aa19.41■□□□□ 0.7
CYSTM1-202ENST00000504227 DLC1Q96QB1 1528 aa19.41■□□□□ 0.7
CYSTM1-202ENST00000504227 FAM135BQ49AJ0 1406 aa19.4■□□□□ 0.7
CYSTM1-202ENST00000504227 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.69
CYSTM1-202ENST00000504227 ROBO2Q9HCK4 1378 aa19.39■□□□□ 0.69
CYSTM1-202ENST00000504227 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
CYSTM1-202ENST00000504227 PTCH1Q13635 1447 aa19.37■□□□□ 0.69
CYSTM1-202ENST00000504227 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
CYSTM1-202ENST00000504227 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
CYSTM1-202ENST00000504227 TESK2Q96S53 571 aa19.36■□□□□ 0.69
CYSTM1-202ENST00000504227 KNDC1Q76NI1 1749 aa19.36■□□□□ 0.69
CYSTM1-202ENST00000504227 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
CYSTM1-202ENST00000504227 CPS1P31327 1500 aa19.35■□□□□ 0.69
CYSTM1-202ENST00000504227 ZNF335Q9H4Z2 1342 aaPredicted RBP19.35■□□□□ 0.69
CYSTM1-202ENST00000504227 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
CYSTM1-202ENST00000504227 TMF1P82094 1093 aa19.35■□□□□ 0.69
CYSTM1-202ENST00000504227 PLEKHH1Q9ULM0 1364 aa19.34■□□□□ 0.69
CYSTM1-202ENST00000504227 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
CYSTM1-202ENST00000504227 SBNO2Q9Y2G9 1366 aa19.33■□□□□ 0.69
CYSTM1-202ENST00000504227 NWD1Q149M9 1564 aa19.33■□□□□ 0.69
CYSTM1-202ENST00000504227 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms