RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 CHGAP10645 457 aaKnown RBP33■■■□□ 2.87
RNF4-205ENST00000504224 ITGAEP38570 1179 aa33■■■□□ 2.87
RNF4-205ENST00000504224 ROCK1Q13464 1354 aa32.97■■■□□ 2.87
RNF4-205ENST00000504224 UNC13BO14795 1591 aa32.97■■■□□ 2.87
RNF4-205ENST00000504224 HDGFP51858 240 aaKnown RBP32.97■■■□□ 2.87
RNF4-205ENST00000504224 PPARGC1BQ86YN6 1023 aaKnown RBP32.97■■■□□ 2.87
RNF4-205ENST00000504224 RIMS2Q9UQ26 1411 aa32.96■■■□□ 2.87
RNF4-205ENST00000504224 GCC2Q8IWJ2 1684 aa32.94■■■□□ 2.86
RNF4-205ENST00000504224 ZFYVE9O95405 1425 aa32.94■■■□□ 2.86
RNF4-205ENST00000504224 PLEKHG1Q9ULL1 1385 aa32.93■■■□□ 2.86
RNF4-205ENST00000504224 FAM135BQ49AJ0 1406 aa32.92■■■□□ 2.86
RNF4-205ENST00000504224 NKTRP30414 1462 aaKnown RBP32.91■■■□□ 2.86
RNF4-205ENST00000504224 MYO5BQ9ULV0 1848 aa32.91■■■□□ 2.86
RNF4-205ENST00000504224 TMEM131LA2VDJ0 1609 aa32.9■■■□□ 2.86
RNF4-205ENST00000504224 NWD1Q149M9 1564 aa32.89■■■□□ 2.86
RNF4-205ENST00000504224 NUP155O75694 1391 aa32.89■■■□□ 2.86
RNF4-205ENST00000504224 NUTM2DQ5VT03 806 aaPredicted RBP32.88■■■□□ 2.85
RNF4-205ENST00000504224 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.88■■■□□ 2.85
RNF4-205ENST00000504224 E9PCH4 1651 aa32.87■■■□□ 2.85
RNF4-205ENST00000504224 MSH6P52701 1360 aa32.86■■■□□ 2.85
RNF4-205ENST00000504224 IQGAP3Q86VI3 1631 aa32.85■■■□□ 2.85
RNF4-205ENST00000504224 TBX22Q9Y458 520 aa32.82■■■□□ 2.84
RNF4-205ENST00000504224 ROBO1Q9Y6N7 1651 aa32.8■■■□□ 2.84
RNF4-205ENST00000504224 C14orf37Q86TY3 774 aa32.77■■■□□ 2.84
RNF4-205ENST00000504224 SLAIN2Q9P270 581 aa32.77■■■□□ 2.84
RNF4-205ENST00000504224 CHD2O14647 1828 aaKnown RBP32.76■■■□□ 2.83
RNF4-205ENST00000504224 ADAMTS13Q76LX8 1427 aa32.73■■■□□ 2.83
RNF4-205ENST00000504224 RGS17Q9UGC6 210 aaPredicted RBP32.71■■■□□ 2.83
RNF4-205ENST00000504224 DIP2AQ14689 1571 aa32.68■■■□□ 2.82
RNF4-205ENST00000504224 ZNF326Q5BKZ1 582 aaKnown RBP32.66■■■□□ 2.82
RNF4-205ENST00000504224 PIK3R4Q99570 1358 aa32.66■■■□□ 2.82
RNF4-205ENST00000504224 NCOA3Q9Y6Q9 1424 aa32.66■■■□□ 2.82
RNF4-205ENST00000504224 AMOTL2Q9Y2J4 779 aa32.63■■■□□ 2.81
RNF4-205ENST00000504224 TRPM2O94759 1503 aa32.62■■■□□ 2.81
RNF4-205ENST00000504224 ATF3P18847 181 aa32.62■■■□□ 2.81
RNF4-205ENST00000504224 PHLPP1O60346 1717 aa32.62■■■□□ 2.81
RNF4-205ENST00000504224 C19orf44Q9H6X5 657 aa32.61■■■□□ 2.81
RNF4-205ENST00000504224 CADPS2Q86UW7 1296 aa32.6■■■□□ 2.81
RNF4-205ENST00000504224 SPHKAPQ2M3C7 1700 aa32.6■■■□□ 2.81
RNF4-205ENST00000504224 JCADQ9P266 1359 aa32.58■■■□□ 2.81
RNF4-205ENST00000504224 PTPRUQ92729 1446 aa32.58■■■□□ 2.81
RNF4-205ENST00000504224 POTEAQ6S8J7 498 aa32.56■■■□□ 2.8
RNF4-205ENST00000504224 RRBP1Q9P2E9 1410 aaKnown RBP32.56■■■□□ 2.8
RNF4-205ENST00000504224 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.54■■■□□ 2.8
RNF4-205ENST00000504224 NAIPQ13075 1403 aa32.51■■■□□ 2.8
RNF4-205ENST00000504224 TRIM52Q96A61 297 aa32.5■■■□□ 2.79
RNF4-205ENST00000504224 SETBP1Q9Y6X0 1596 aa32.49■■■□□ 2.79
RNF4-205ENST00000504224 COL16A1Q07092 1604 aaPredicted RBP32.48■■■□□ 2.79
RNF4-205ENST00000504224 NRXN3Q9Y4C0 1643 aa32.48■■■□□ 2.79
RNF4-205ENST00000504224 CLTCL1P53675 1640 aa32.48■■■□□ 2.79
RNF4-205ENST00000504224 METP08581 1390 aa32.45■■■□□ 2.79
RNF4-205ENST00000504224 MEX3CQ5U5Q3 659 aaKnown RBP32.44■■■□□ 2.78
RNF4-205ENST00000504224 BRINP3Q76B58 766 aa32.43■■■□□ 2.78
RNF4-205ENST00000504224 XRN1Q8IZH2 1706 aaKnown RBP32.43■■■□□ 2.78
RNF4-205ENST00000504224 AHDC1Q5TGY3 1603 aaPredicted RBP32.41■■■□□ 2.78
RNF4-205ENST00000504224 SPATA31A6Q5VVP1 1343 aa32.41■■■□□ 2.78
RNF4-205ENST00000504224 DCCP43146 1447 aa32.41■■■□□ 2.78
RNF4-205ENST00000504224 NEXMIFQ5QGS0 1516 aa32.41■■■□□ 2.78
RNF4-205ENST00000504224 SLC4A1APQ9BWU0 796 aaKnown RBP32.37■■■□□ 2.77
RNF4-205ENST00000504224 HFM1A2PYH4 1435 aa32.36■■■□□ 2.77
RNF4-205ENST00000504224 LRP6O75581 1613 aa32.36■■■□□ 2.77
RNF4-205ENST00000504224 KIF1BO60333 1816 aa32.35■■■□□ 2.77
RNF4-205ENST00000504224 MST1RQ04912 1400 aa32.33■■■□□ 2.77
RNF4-205ENST00000504224 ASXL1Q8IXJ9 1541 aa32.32■■■□□ 2.76
RNF4-205ENST00000504224 NUTM2BA6NNL0 878 aaPredicted RBP32.32■■■□□ 2.76
RNF4-205ENST00000504224 NUTM2EB1AL46 878 aaPredicted RBP32.32■■■□□ 2.76
RNF4-205ENST00000504224 VGFO15240 615 aaPredicted RBP32.32■■■□□ 2.76
RNF4-205ENST00000504224 NUTM2AQ8IVF1 878 aaPredicted RBP32.32■■■□□ 2.76
RNF4-205ENST00000504224 ADGRL3Q9HAR2 1447 aa32.31■■■□□ 2.76
RNF4-205ENST00000504224 SHPRHQ149N8 1683 aa32.3■■■□□ 2.76
RNF4-205ENST00000504224 ZNF772Q68DY9 489 aaPredicted RBP32.27■■■□□ 2.76
RNF4-205ENST00000504224 RPGRIP1LQ68CZ1 1315 aa32.25■■■□□ 2.75
RNF4-205ENST00000504224 DDX17Q92841 729 aaKnown RBP32.24■■■□□ 2.75
RNF4-205ENST00000504224 FOXD1Q16676 465 aa32.23■■■□□ 2.75
RNF4-205ENST00000504224 LRRC59Q96AG4 307 aaKnown RBP32.22■■■□□ 2.75
RNF4-205ENST00000504224 SETD5Q9C0A6 1442 aa32.22■■■□□ 2.75
RNF4-205ENST00000504224 NALCNQ8IZF0 1738 aa32.22■■■□□ 2.75
RNF4-205ENST00000504224 SETD1AO15047 1707 aaKnown RBP32.21■■■□□ 2.75
RNF4-205ENST00000504224 PTCH1Q13635 1447 aa32.19■■■□□ 2.74
RNF4-205ENST00000504224 ROBO2Q9HCK4 1378 aa32.19■■■□□ 2.74
RNF4-205ENST00000504224 NHSL1Q5SYE7 1610 aa32.18■■■□□ 2.74
RNF4-205ENST00000504224 C1orf167Q5SNV9 1468 aa32.16■■■□□ 2.74
RNF4-205ENST00000504224 AFF2P51816 1311 aa32.12■■■□□ 2.73
RNF4-205ENST00000504224 RXRBP28702 533 aa32.12■■■□□ 2.73
RNF4-205ENST00000504224 PPLO60437 1756 aa32.12■■■□□ 2.73
RNF4-205ENST00000504224 PNPLA6Q8IY17 1366 aa32.11■■■□□ 2.73
RNF4-205ENST00000504224 RGL3Q3MIN7 710 aa32.11■■■□□ 2.73
RNF4-205ENST00000504224 CCDC144AA2RUR9 1427 aa32.1■■■□□ 2.73
RNF4-205ENST00000504224 C8orf37Q96NL8 207 aa32.1■■■□□ 2.73
RNF4-205ENST00000504224 ORAI2Q96SN7 254 aa32.1■■■□□ 2.73
RNF4-205ENST00000504224 MPHOSPH9Q99550 1183 aa32.08■■■□□ 2.73
RNF4-205ENST00000504224 ADGRF5Q8IZF2 1346 aa32.07■■■□□ 2.72
RNF4-205ENST00000504224 PRAG1Q86YV5 1406 aa32.06■■■□□ 2.72
RNF4-205ENST00000504224 STK26Q9P289 416 aa32.04■■■□□ 2.72
RNF4-205ENST00000504224 ADAMTS2O95450 1211 aa32.03■■■□□ 2.72
RNF4-205ENST00000504224 SOS2Q07890 1332 aaPredicted RBP32■■■□□ 2.71
RNF4-205ENST00000504224 ANKRD30BQ9BXX2 1392 aa31.99■■■□□ 2.71
RNF4-205ENST00000504224 UPF1Q92900 1129 aaKnown RBP eCLIP31.99■■■□□ 2.71
RNF4-205ENST00000504224 NGLY1Q96IV0 654 aa31.99■■■□□ 2.71
RNF4-205ENST00000504224 SPATA31E1Q6ZUB1 1445 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms