RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 MYCNP04198 464 aaPredicted RBP7.49□□□□□ -1.21
LINC01340-201ENST00000504012 NPM1P06748 294 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC01340-201ENST00000504012 HSP90AB1P08238 724 aaKnown RBP7.49□□□□□ -1.21
LINC01340-201ENST00000504012 IRX3P78415 501 aaPredicted RBP7.49□□□□□ -1.21
LINC01340-201ENST00000504012 CREBRFQ8IUR6 639 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 PDLIM2Q96JY6 352 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 CFAP44Q96MT7 982 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 R3HCC1Q9Y3T6 440 aaKnown RBP7.49□□□□□ -1.21
LINC01340-201ENST00000504012 KIAA1107Q9UPP5 1409 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 KIF15Q9NS87 1388 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 GABPB1Q06547 395 aaPredicted RBP7.48□□□□□ -1.21
LINC01340-201ENST00000504012 NBPF1Q3BBV0 1214 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 DNTTIP2Q5QJE6 756 aaKnown RBP7.48□□□□□ -1.21
LINC01340-201ENST00000504012 CLEC17AQ6ZS10 378 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 MYRIPQ8NFW9 859 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 FEZ1Q99689 392 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 NLRP1Q9C000 1473 aa7.48□□□□□ -1.21
LINC01340-201ENST00000504012 MYBBP1AQ9BQG0 1328 aaKnown RBP7.48□□□□□ -1.21
LINC01340-201ENST00000504012 CCDC66A2RUB6 948 aa7.47□□□□□ -1.21
LINC01340-201ENST00000504012 TBC1D2Q9BYX2 928 aa7.47□□□□□ -1.21
LINC01340-201ENST00000504012 ZKSCAN5Q9Y2L8 839 aa7.47□□□□□ -1.21
LINC01340-201ENST00000504012 HECW1Q76N89 1606 aa7.47□□□□□ -1.21
LINC01340-201ENST00000504012 BIVM-ERCC5R4GMW8 1640 aa7.47□□□□□ -1.21
LINC01340-201ENST00000504012 CTTNBP2Q8WZ74 1663 aa7.47□□□□□ -1.21
LINC01340-201ENST00000504012 CLSTN1O94985 981 aa7.46□□□□□ -1.22
LINC01340-201ENST00000504012 DDIT3P35638 169 aa7.46□□□□□ -1.22
LINC01340-201ENST00000504012 ZNF445P59923 1031 aa7.46□□□□□ -1.22
LINC01340-201ENST00000504012 POLA2Q14181 598 aa7.46□□□□□ -1.22
LINC01340-201ENST00000504012 SECISBP2LQ93073 1101 aaKnown RBP7.46□□□□□ -1.22
LINC01340-201ENST00000504012 GBP4Q96PP9 640 aa7.46□□□□□ -1.22
LINC01340-201ENST00000504012 AQRO60306 1485 aaKnown RBP eCLIP7.46□□□□□ -1.22
LINC01340-201ENST00000504012 NAIPQ13075 1403 aa7.45□□□□□ -1.22
LINC01340-201ENST00000504012 NCOA3Q9Y6Q9 1424 aa7.45□□□□□ -1.22
LINC01340-201ENST00000504012 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
LINC01340-201ENST00000504012 FAM50AQ14320 339 aaKnown RBP7.45□□□□□ -1.22
LINC01340-201ENST00000504012 PDCL2Q8N4E4 241 aa7.45□□□□□ -1.22
LINC01340-201ENST00000504012 ZNF622Q969S3 477 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC01340-201ENST00000504012 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
LINC01340-201ENST00000504012 GEMIN8Q9NWZ8 242 aaKnown RBP7.45□□□□□ -1.22
LINC01340-201ENST00000504012 CCDC39Q9UFE4 941 aa7.45□□□□□ -1.22
LINC01340-201ENST00000504012 BLMP54132 1417 aaPredicted RBP7.44□□□□□ -1.22
LINC01340-201ENST00000504012 TULP2O00295 520 aa7.44□□□□□ -1.22
LINC01340-201ENST00000504012 GAS2L3Q86XJ1 694 aa7.44□□□□□ -1.22
LINC01340-201ENST00000504012 TICAM2Q86XR7 235 aa7.44□□□□□ -1.22
LINC01340-201ENST00000504012 RBM42Q9BTD8 480 aaKnown RBP7.44□□□□□ -1.22
LINC01340-201ENST00000504012 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
LINC01340-201ENST00000504012 SLKQ9H2G2 1235 aaPredicted RBP7.44□□□□□ -1.22
LINC01340-201ENST00000504012 PRDM10Q9NQV6 1147 aa7.44□□□□□ -1.22
LINC01340-201ENST00000504012 KIF3AQ9Y496 699 aa7.44□□□□□ -1.22
LINC01340-201ENST00000504012 SYCP1Q15431 976 aa7.43□□□□□ -1.22
LINC01340-201ENST00000504012 SNX21Q969T3 373 aa7.43□□□□□ -1.22
LINC01340-201ENST00000504012 ZNF692Q9BU19 519 aaPredicted RBP7.43□□□□□ -1.22
LINC01340-201ENST00000504012 OGFRQ9NZT2 677 aa7.43□□□□□ -1.22
LINC01340-201ENST00000504012 FGD6Q6ZV73 1430 aa7.43□□□□□ -1.22
LINC01340-201ENST00000504012 RPRD2Q5VT52 1461 aaKnown RBP7.43□□□□□ -1.22
LINC01340-201ENST00000504012 CUX1P39880 1505 aa7.42□□□□□ -1.22
LINC01340-201ENST00000504012 IRX5P78411 483 aaPredicted RBP7.42□□□□□ -1.22
LINC01340-201ENST00000504012 NLRP13Q86W25 1043 aa7.42□□□□□ -1.22
LINC01340-201ENST00000504012 SMC5Q8IY18 1101 aa7.42□□□□□ -1.22
LINC01340-201ENST00000504012 TIGD1Q96MW7 591 aa7.42□□□□□ -1.22
LINC01340-201ENST00000504012 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.42□□□□□ -1.22
LINC01340-201ENST00000504012 CALCOCO1Q9P1Z2 691 aa7.42□□□□□ -1.22
LINC01340-201ENST00000504012 KLHL40Q2TBA0 621 aa7.41□□□□□ -1.22
LINC01340-201ENST00000504012 SPRYD3Q8NCJ5 442 aa7.41□□□□□ -1.22
LINC01340-201ENST00000504012 NECTIN2Q92692 538 aa7.41□□□□□ -1.22
LINC01340-201ENST00000504012 L3MBTL2Q969R5 705 aa7.41□□□□□ -1.22
LINC01340-201ENST00000504012 PLSCR2Q9NRY7 297 aa7.41□□□□□ -1.22
LINC01340-201ENST00000504012 GOLGA6L22H0YM25 854 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 RAB3GAP1Q15042 981 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 CTR9Q6PD62 1173 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 NGEFQ8N5V2 710 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 CEP120Q8N960 986 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.4□□□□□ -1.22
LINC01340-201ENST00000504012 CGNL1Q0VF96 1302 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 ANKRD30AQ9BXX3 1397 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 KIF27Q86VH2 1401 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 FYCO1Q9BQS8 1478 aa7.4□□□□□ -1.22
LINC01340-201ENST00000504012 GCC2Q8IWJ2 1684 aa7.4□□□□□ -1.23
LINC01340-201ENST00000504012 TEX14Q8IWB6 1497 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 PARD3Q8TEW0 1356 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 NPC1L1Q9UHC9 1359 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 PSEN1P49768 467 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 CBX1P83916 185 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 PDE3AQ14432 1141 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 CC2D2BQ6DHV5 1058 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 ZNF710Q8N1W2 664 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 ANKRD7Q92527 254 aa7.39□□□□□ -1.23
LINC01340-201ENST00000504012 CGNQ9P2M7 1197 aaKnown RBP7.39□□□□□ -1.23
LINC01340-201ENST00000504012 ATF5Q9Y2D1 282 aaPredicted RBP7.39□□□□□ -1.23
LINC01340-201ENST00000504012 THOC2Q8NI27 1593 aaKnown RBP7.38□□□□□ -1.23
LINC01340-201ENST00000504012 CLASP1Q7Z460 1538 aa7.38□□□□□ -1.23
LINC01340-201ENST00000504012 DENND4BO75064 1496 aaPredicted RBP7.38□□□□□ -1.23
LINC01340-201ENST00000504012 ANKRD30BQ9BXX2 1392 aa7.38□□□□□ -1.23
LINC01340-201ENST00000504012 RAD50Q92878 1312 aa7.38□□□□□ -1.23
LINC01340-201ENST00000504012 VGLL3A8MV65 326 aa7.38□□□□□ -1.23
LINC01340-201ENST00000504012 PLIN1O60240 522 aa7.38□□□□□ -1.23
LINC01340-201ENST00000504012 PTMAP06454 111 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms