RNA–Protein interactions for RNA: ENST00000504008.1

C4orf36-206, Transcript of chromosome 4 open reading frame 36, humanhuman

TSL 2

Gene C4orf36, Length 448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf36-206ENST00000504008 ZFYVE9O95405 1425 aa29.29■■■□□ 2.28
C4orf36-206ENST00000504008 NKTRP30414 1462 aaKnown RBP29.28■■■□□ 2.28
C4orf36-206ENST00000504008 TMEM131LA2VDJ0 1609 aa29.27■■■□□ 2.28
C4orf36-206ENST00000504008 ROCK1Q13464 1354 aa29.27■■■□□ 2.28
C4orf36-206ENST00000504008 FAM135BQ49AJ0 1406 aa29.27■■■□□ 2.28
C4orf36-206ENST00000504008 E9PCH4 1651 aa29.24■■■□□ 2.27
C4orf36-206ENST00000504008 PLEKHG1Q9ULL1 1385 aa29.24■■■□□ 2.27
C4orf36-206ENST00000504008 PROSER2Q86WR7 435 aaPredicted RBP29.23■■■□□ 2.27
C4orf36-206ENST00000504008 RIMS2Q9UQ26 1411 aa29.22■■■□□ 2.27
C4orf36-206ENST00000504008 IQGAP3Q86VI3 1631 aa29.22■■■□□ 2.27
C4orf36-206ENST00000504008 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
C4orf36-206ENST00000504008 BCANQ96GW7 911 aa29.19■■■□□ 2.26
C4orf36-206ENST00000504008 CHD2O14647 1828 aaKnown RBP29.18■■■□□ 2.26
C4orf36-206ENST00000504008 ROBO1Q9Y6N7 1651 aa29.18■■■□□ 2.26
C4orf36-206ENST00000504008 HDGFP51858 240 aaKnown RBP29.16■■■□□ 2.26
C4orf36-206ENST00000504008 PPP1R15AO75807 674 aaPredicted RBP29.15■■■□□ 2.26
C4orf36-206ENST00000504008 MSH6P52701 1360 aa29.13■■■□□ 2.25
C4orf36-206ENST00000504008 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.11■■■□□ 2.25
C4orf36-206ENST00000504008 TBX22Q9Y458 520 aa29.11■■■□□ 2.25
C4orf36-206ENST00000504008 NUP155O75694 1391 aa29.11■■■□□ 2.25
C4orf36-206ENST00000504008 CHGAP10645 457 aaKnown RBP29.1■■■□□ 2.25
C4orf36-206ENST00000504008 ADAMTS13Q76LX8 1427 aa29.09■■■□□ 2.25
C4orf36-206ENST00000504008 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
C4orf36-206ENST00000504008 RGS17Q9UGC6 210 aaPredicted RBP29.07■■■□□ 2.24
C4orf36-206ENST00000504008 ITGAEP38570 1179 aa29.06■■■□□ 2.24
C4orf36-206ENST00000504008 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
C4orf36-206ENST00000504008 SLAIN2Q9P270 581 aa29.04■■■□□ 2.24
C4orf36-206ENST00000504008 NUTM2DQ5VT03 806 aaPredicted RBP29.03■■■□□ 2.24
C4orf36-206ENST00000504008 PIK3R4Q99570 1358 aa29.02■■■□□ 2.24
C4orf36-206ENST00000504008 PPARGC1BQ86YN6 1023 aaKnown RBP29.01■■■□□ 2.23
C4orf36-206ENST00000504008 PHLPP1O60346 1717 aa29■■■□□ 2.23
C4orf36-206ENST00000504008 SPHKAPQ2M3C7 1700 aa28.99■■■□□ 2.23
C4orf36-206ENST00000504008 TRPM2O94759 1503 aa28.98■■■□□ 2.23
C4orf36-206ENST00000504008 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.94■■■□□ 2.22
C4orf36-206ENST00000504008 COL16A1Q07092 1604 aaPredicted RBP28.93■■■□□ 2.22
C4orf36-206ENST00000504008 NRXN3Q9Y4C0 1643 aa28.93■■■□□ 2.22
C4orf36-206ENST00000504008 PTPRUQ92729 1446 aa28.93■■■□□ 2.22
C4orf36-206ENST00000504008 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
C4orf36-206ENST00000504008 JCADQ9P266 1359 aa28.91■■■□□ 2.22
C4orf36-206ENST00000504008 C14orf37Q86TY3 774 aa28.91■■■□□ 2.22
C4orf36-206ENST00000504008 C19orf44Q9H6X5 657 aa28.9■■■□□ 2.22
C4orf36-206ENST00000504008 RRBP1Q9P2E9 1410 aaKnown RBP28.9■■■□□ 2.22
C4orf36-206ENST00000504008 POTEAQ6S8J7 498 aa28.89■■■□□ 2.22
C4orf36-206ENST00000504008 CADPS2Q86UW7 1296 aa28.89■■■□□ 2.22
C4orf36-206ENST00000504008 AMOTL2Q9Y2J4 779 aa28.89■■■□□ 2.22
C4orf36-206ENST00000504008 XRN1Q8IZH2 1706 aaKnown RBP28.89■■■□□ 2.21
C4orf36-206ENST00000504008 AHDC1Q5TGY3 1603 aaPredicted RBP28.87■■■□□ 2.21
C4orf36-206ENST00000504008 CLTCL1P53675 1640 aa28.86■■■□□ 2.21
C4orf36-206ENST00000504008 ATF3P18847 181 aa28.85■■■□□ 2.21
C4orf36-206ENST00000504008 NAIPQ13075 1403 aa28.85■■■□□ 2.21
C4orf36-206ENST00000504008 DCCP43146 1447 aa28.83■■■□□ 2.21
C4orf36-206ENST00000504008 ZNF326Q5BKZ1 582 aaKnown RBP28.82■■■□□ 2.2
C4orf36-206ENST00000504008 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
C4orf36-206ENST00000504008 METP08581 1390 aa28.79■■■□□ 2.2
C4orf36-206ENST00000504008 SHPRHQ149N8 1683 aa28.77■■■□□ 2.2
C4orf36-206ENST00000504008 LRP6O75581 1613 aa28.77■■■□□ 2.2
C4orf36-206ENST00000504008 SPATA31A6Q5VVP1 1343 aa28.77■■■□□ 2.2
C4orf36-206ENST00000504008 KIF1BO60333 1816 aa28.76■■■□□ 2.19
C4orf36-206ENST00000504008 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
C4orf36-206ENST00000504008 HFM1A2PYH4 1435 aa28.72■■■□□ 2.19
C4orf36-206ENST00000504008 MST1RQ04912 1400 aa28.72■■■□□ 2.19
C4orf36-206ENST00000504008 ASXL1Q8IXJ9 1541 aa28.72■■■□□ 2.19
C4orf36-206ENST00000504008 ADGRL3Q9HAR2 1447 aa28.69■■■□□ 2.18
C4orf36-206ENST00000504008 NALCNQ8IZF0 1738 aa28.68■■■□□ 2.18
C4orf36-206ENST00000504008 NHSL1Q5SYE7 1610 aa28.68■■■□□ 2.18
C4orf36-206ENST00000504008 SETD1AO15047 1707 aaKnown RBP28.66■■■□□ 2.18
C4orf36-206ENST00000504008 SETD5Q9C0A6 1442 aa28.64■■■□□ 2.18
C4orf36-206ENST00000504008 MEX3CQ5U5Q3 659 aaKnown RBP28.64■■■□□ 2.18
C4orf36-206ENST00000504008 TRIM52Q96A61 297 aa28.64■■■□□ 2.18
C4orf36-206ENST00000504008 PTCH1Q13635 1447 aa28.61■■■□□ 2.17
C4orf36-206ENST00000504008 VGFO15240 615 aaPredicted RBP28.61■■■□□ 2.17
C4orf36-206ENST00000504008 ZNF772Q68DY9 489 aaPredicted RBP28.6■■■□□ 2.17
C4orf36-206ENST00000504008 SLC4A1APQ9BWU0 796 aaKnown RBP28.59■■■□□ 2.17
C4orf36-206ENST00000504008 PRAG1Q86YV5 1406 aa28.59■■■□□ 2.17
C4orf36-206ENST00000504008 PPLO60437 1756 aa28.58■■■□□ 2.17
C4orf36-206ENST00000504008 RPGRIP1LQ68CZ1 1315 aa28.58■■■□□ 2.17
C4orf36-206ENST00000504008 ROBO2Q9HCK4 1378 aa28.56■■■□□ 2.16
C4orf36-206ENST00000504008 C1orf167Q5SNV9 1468 aa28.54■■■□□ 2.16
C4orf36-206ENST00000504008 NUTM2BA6NNL0 878 aaPredicted RBP28.54■■■□□ 2.16
C4orf36-206ENST00000504008 NUTM2EB1AL46 878 aaPredicted RBP28.54■■■□□ 2.16
C4orf36-206ENST00000504008 NUTM2AQ8IVF1 878 aaPredicted RBP28.54■■■□□ 2.16
C4orf36-206ENST00000504008 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
C4orf36-206ENST00000504008 DDX17Q92841 729 aaKnown RBP28.53■■■□□ 2.16
C4orf36-206ENST00000504008 LAMC1P11047 1609 aa28.53■■■□□ 2.16
C4orf36-206ENST00000504008 PNPLA6Q8IY17 1366 aa28.51■■■□□ 2.16
C4orf36-206ENST00000504008 FOXD1Q16676 465 aa28.47■■■□□ 2.15
C4orf36-206ENST00000504008 AFF2P51816 1311 aa28.46■■■□□ 2.15
C4orf36-206ENST00000504008 RXRBP28702 533 aa28.45■■■□□ 2.14
C4orf36-206ENST00000504008 CDK12Q9NYV4 1490 aaPredicted RBP28.45■■■□□ 2.14
C4orf36-206ENST00000504008 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
C4orf36-206ENST00000504008 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
C4orf36-206ENST00000504008 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
C4orf36-206ENST00000504008 SOS2Q07890 1332 aaPredicted RBP28.42■■■□□ 2.14
C4orf36-206ENST00000504008 ADGRF5Q8IZF2 1346 aa28.41■■■□□ 2.14
C4orf36-206ENST00000504008 IFT172Q9UG01 1749 aa28.4■■■□□ 2.14
C4orf36-206ENST00000504008 UPF1Q92900 1129 aaKnown RBP eCLIP28.4■■■□□ 2.14
C4orf36-206ENST00000504008 CDC42BPGQ6DT37 1551 aa28.4■■■□□ 2.14
C4orf36-206ENST00000504008 C8orf37Q96NL8 207 aa28.39■■■□□ 2.14
C4orf36-206ENST00000504008 MPHOSPH9Q99550 1183 aa28.37■■■□□ 2.13
C4orf36-206ENST00000504008 ANKRD30BQ9BXX2 1392 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms