RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ZFYVE9O95405 1425 aa24.21■■□□□ 1.47
SCLT1-205ENST00000503401 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
SCLT1-205ENST00000503401 DMRT2Q9Y5R5 561 aa24.19■■□□□ 1.46
SCLT1-205ENST00000503401 DHX57Q6P158 1386 aaKnown RBP24.18■■□□□ 1.46
SCLT1-205ENST00000503401 IQGAP1P46940 1657 aa24.18■■□□□ 1.46
SCLT1-205ENST00000503401 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
SCLT1-205ENST00000503401 MED14O60244 1454 aa24.17■■□□□ 1.46
SCLT1-205ENST00000503401 RGL3Q3MIN7 710 aa24.16■■□□□ 1.46
SCLT1-205ENST00000503401 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
SCLT1-205ENST00000503401 SPATA31E1Q6ZUB1 1445 aa24.14■■□□□ 1.46
SCLT1-205ENST00000503401 NEXMIFQ5QGS0 1516 aa24.13■■□□□ 1.45
SCLT1-205ENST00000503401 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
SCLT1-205ENST00000503401 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.11■■□□□ 1.45
SCLT1-205ENST00000503401 BCANQ96GW7 911 aa24.1■■□□□ 1.45
SCLT1-205ENST00000503401 PPLO60437 1756 aa24.1■■□□□ 1.45
SCLT1-205ENST00000503401 PLEKHG1Q9ULL1 1385 aa24.07■■□□□ 1.44
SCLT1-205ENST00000503401 SLC26A8Q96RN1 970 aa24.07■■□□□ 1.44
SCLT1-205ENST00000503401 IFT172Q9UG01 1749 aa24.06■■□□□ 1.44
SCLT1-205ENST00000503401 SIN3AQ96ST3 1273 aa24.06■■□□□ 1.44
SCLT1-205ENST00000503401 ZNF335Q9H4Z2 1342 aaPredicted RBP24.05■■□□□ 1.44
SCLT1-205ENST00000503401 RPGRIP1LQ68CZ1 1315 aa24.05■■□□□ 1.44
SCLT1-205ENST00000503401 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
SCLT1-205ENST00000503401 VGFO15240 615 aaPredicted RBP24.01■■□□□ 1.43
SCLT1-205ENST00000503401 NEUROD1Q13562 356 aa24.01■■□□□ 1.43
SCLT1-205ENST00000503401 ADAMTS13Q76LX8 1427 aa24■■□□□ 1.43
SCLT1-205ENST00000503401 ADGRF5Q8IZF2 1346 aa23.99■■□□□ 1.43
SCLT1-205ENST00000503401 STRCP1A6NGW2 1772 aa23.99■■□□□ 1.43
SCLT1-205ENST00000503401 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
SCLT1-205ENST00000503401 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
SCLT1-205ENST00000503401 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.43
SCLT1-205ENST00000503401 KDM2AQ9Y2K7 1162 aa23.95■■□□□ 1.43
SCLT1-205ENST00000503401 TBX22Q9Y458 520 aa23.94■■□□□ 1.42
SCLT1-205ENST00000503401 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
SCLT1-205ENST00000503401 MYOM2P54296 1465 aa23.91■■□□□ 1.42
SCLT1-205ENST00000503401 ALKQ9UM73 1620 aa23.91■■□□□ 1.42
SCLT1-205ENST00000503401 SETD1AO15047 1707 aaKnown RBP23.91■■□□□ 1.42
SCLT1-205ENST00000503401 CHD2O14647 1828 aaKnown RBP23.91■■□□□ 1.42
SCLT1-205ENST00000503401 PIK3C2GO75747 1445 aa23.9■■□□□ 1.42
SCLT1-205ENST00000503401 METP08581 1390 aa23.89■■□□□ 1.42
SCLT1-205ENST00000503401 NRXN1Q9ULB1 1477 aa23.88■■□□□ 1.41
SCLT1-205ENST00000503401 KCNA6P17658 529 aa23.87■■□□□ 1.41
SCLT1-205ENST00000503401 L3MBTL2Q969R5 705 aa23.87■■□□□ 1.41
SCLT1-205ENST00000503401 PTPRUQ92729 1446 aa23.86■■□□□ 1.41
SCLT1-205ENST00000503401 CCER1Q8TC90 406 aaPredicted RBP23.86■■□□□ 1.41
SCLT1-205ENST00000503401 CPS1P31327 1500 aa23.86■■□□□ 1.41
SCLT1-205ENST00000503401 NWD1Q149M9 1564 aa23.86■■□□□ 1.41
SCLT1-205ENST00000503401 CERKQ8TCT0 537 aa23.85■■□□□ 1.41
SCLT1-205ENST00000503401 PIK3R4Q99570 1358 aa23.83■■□□□ 1.41
SCLT1-205ENST00000503401 CFAP70Q5T0N1 1121 aa23.83■■□□□ 1.41
SCLT1-205ENST00000503401 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
SCLT1-205ENST00000503401 AMOTL2Q9Y2J4 779 aa23.82■■□□□ 1.4
SCLT1-205ENST00000503401 LRRC7Q96NW7 1537 aa23.81■■□□□ 1.4
SCLT1-205ENST00000503401 TMEM132EQ6IEE7 984 aa23.81■■□□□ 1.4
SCLT1-205ENST00000503401 C14orf93Q9H972 538 aaKnown RBP23.81■■□□□ 1.4
SCLT1-205ENST00000503401 XRN1Q8IZH2 1706 aaKnown RBP23.8■■□□□ 1.4
SCLT1-205ENST00000503401 ASXL1Q8IXJ9 1541 aa23.8■■□□□ 1.4
SCLT1-205ENST00000503401 XIRP1Q702N8 1843 aaKnown RBP23.8■■□□□ 1.4
SCLT1-205ENST00000503401 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
SCLT1-205ENST00000503401 STAC3Q96MF2 364 aa23.79■■□□□ 1.4
SCLT1-205ENST00000503401 NKTRP30414 1462 aaKnown RBP23.79■■□□□ 1.4
SCLT1-205ENST00000503401 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
SCLT1-205ENST00000503401 LAMC1P11047 1609 aa23.78■■□□□ 1.4
SCLT1-205ENST00000503401 PRAG1Q86YV5 1406 aa23.76■■□□□ 1.39
SCLT1-205ENST00000503401 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
SCLT1-205ENST00000503401 TMEM94Q12767 1356 aa23.75■■□□□ 1.39
SCLT1-205ENST00000503401 STK26Q9P289 416 aa23.75■■□□□ 1.39
SCLT1-205ENST00000503401 ADGRB1O14514 1584 aa23.71■■□□□ 1.39
SCLT1-205ENST00000503401 YTHDC2Q9H6S0 1430 aaKnown RBP23.71■■□□□ 1.39
SCLT1-205ENST00000503401 IQSEC2Q5JU85 1478 aa23.7■■□□□ 1.39
SCLT1-205ENST00000503401 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.39
SCLT1-205ENST00000503401 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
SCLT1-205ENST00000503401 KIAA1210Q9ULL0 1709 aa23.69■■□□□ 1.38
SCLT1-205ENST00000503401 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
SCLT1-205ENST00000503401 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
SCLT1-205ENST00000503401 KNDC1Q76NI1 1749 aa23.67■■□□□ 1.38
SCLT1-205ENST00000503401 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
SCLT1-205ENST00000503401 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
SCLT1-205ENST00000503401 ABCC11Q96J66 1382 aa23.65■■□□□ 1.38
SCLT1-205ENST00000503401 TRPM1Q7Z4N2 1603 aa23.65■■□□□ 1.38
SCLT1-205ENST00000503401 TECPR2O15040 1411 aa23.64■■□□□ 1.38
SCLT1-205ENST00000503401 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.38
SCLT1-205ENST00000503401 TRAK1Q9UPV9 953 aa23.64■■□□□ 1.38
SCLT1-205ENST00000503401 UBAP1LF5GYI3 381 aa23.63■■□□□ 1.37
SCLT1-205ENST00000503401 PLEKHH1Q9ULM0 1364 aa23.62■■□□□ 1.37
SCLT1-205ENST00000503401 NALCNQ8IZF0 1738 aa23.62■■□□□ 1.37
SCLT1-205ENST00000503401 MSH6P52701 1360 aa23.61■■□□□ 1.37
SCLT1-205ENST00000503401 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.61■■□□□ 1.37
SCLT1-205ENST00000503401 NCOA3Q9Y6Q9 1424 aa23.6■■□□□ 1.37
SCLT1-205ENST00000503401 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.371e-6■■■■□ 20
SCLT1-205ENST00000503401 ROCK2O75116 1388 aaKnown RBP23.58■■□□□ 1.37
SCLT1-205ENST00000503401 PRAM1Q96QH2 718 aa23.58■■□□□ 1.36
SCLT1-205ENST00000503401 ARHGEF28Q8N1W1 1705 aaKnown RBP23.57■■□□□ 1.36
SCLT1-205ENST00000503401 FBXO41Q8TF61 875 aa23.57■■□□□ 1.36
SCLT1-205ENST00000503401 C19orf44Q9H6X5 657 aa23.57■■□□□ 1.36
SCLT1-205ENST00000503401 ADGRL3Q9HAR2 1447 aa23.57■■□□□ 1.36
SCLT1-205ENST00000503401 DLC1Q96QB1 1528 aa23.56■■□□□ 1.36
SCLT1-205ENST00000503401 TOM1O60784 492 aa23.56■■□□□ 1.36
SCLT1-205ENST00000503401 TIMELESSQ9UNS1 1208 aa23.56■■□□□ 1.36
SCLT1-205ENST00000503401 FAM135BQ49AJ0 1406 aa23.56■■□□□ 1.36
SCLT1-205ENST00000503401 PIP4K2BP78356 416 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms