RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 POTEAQ6S8J7 498 aa20.29■□□□□ 0.84
TRIO-205ENST00000503399 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
TRIO-205ENST00000503399 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
TRIO-205ENST00000503399 FAM50AQ14320 339 aaKnown RBP20.27■□□□□ 0.84
TRIO-205ENST00000503399 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
TRIO-205ENST00000503399 MYO5BQ9ULV0 1848 aa20.26■□□□□ 0.83
TRIO-205ENST00000503399 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
TRIO-205ENST00000503399 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
TRIO-205ENST00000503399 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
TRIO-205ENST00000503399 SLAIN2Q9P270 581 aa20.24■□□□□ 0.83
TRIO-205ENST00000503399 ANKRD50Q9ULJ7 1429 aa20.24■□□□□ 0.83
TRIO-205ENST00000503399 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
TRIO-205ENST00000503399 ZFYVE9O95405 1425 aa20.23■□□□□ 0.83
TRIO-205ENST00000503399 RIMS2Q9UQ26 1411 aa20.23■□□□□ 0.83
TRIO-205ENST00000503399 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
TRIO-205ENST00000503399 CHD2O14647 1828 aaKnown RBP20.21■□□□□ 0.83
TRIO-205ENST00000503399 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
TRIO-205ENST00000503399 JCADQ9P266 1359 aa20.21■□□□□ 0.83
TRIO-205ENST00000503399 HDGFP51858 240 aaKnown RBP20.2■□□□□ 0.82
TRIO-205ENST00000503399 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
TRIO-205ENST00000503399 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
TRIO-205ENST00000503399 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
TRIO-205ENST00000503399 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
TRIO-205ENST00000503399 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIO-205ENST00000503399 UNC13BO14795 1591 aa20.14■□□□□ 0.81
TRIO-205ENST00000503399 MEX3CQ5U5Q3 659 aaKnown RBP20.14■□□□□ 0.81
TRIO-205ENST00000503399 TBX22Q9Y458 520 aa20.14■□□□□ 0.81
TRIO-205ENST00000503399 E9PCH4 1651 aa20.12■□□□□ 0.81
TRIO-205ENST00000503399 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
TRIO-205ENST00000503399 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
TRIO-205ENST00000503399 ATF3P18847 181 aa20.11■□□□□ 0.81
TRIO-205ENST00000503399 LRP6O75581 1613 aa20.11■□□□□ 0.81
TRIO-205ENST00000503399 DIP2AQ14689 1571 aa20.11■□□□□ 0.81
TRIO-205ENST00000503399 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.1■□□□□ 0.81
TRIO-205ENST00000503399 SPATA31A6Q5VVP1 1343 aa20.09■□□□□ 0.81
TRIO-205ENST00000503399 CADPS2Q86UW7 1296 aa20.09■□□□□ 0.81
TRIO-205ENST00000503399 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
TRIO-205ENST00000503399 AHDC1Q5TGY3 1603 aaPredicted RBP20.07■□□□□ 0.8
TRIO-205ENST00000503399 TRPM2O94759 1503 aa20.07■□□□□ 0.8
TRIO-205ENST00000503399 IQGAP3Q86VI3 1631 aa20.06■□□□□ 0.8
TRIO-205ENST00000503399 PIK3R4Q99570 1358 aa20.06■□□□□ 0.8
TRIO-205ENST00000503399 ZNF772Q68DY9 489 aaPredicted RBP20.05■□□□□ 0.8
TRIO-205ENST00000503399 TRIM52Q96A61 297 aa20.05■□□□□ 0.8
TRIO-205ENST00000503399 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
TRIO-205ENST00000503399 SHPRHQ149N8 1683 aa20.05■□□□□ 0.8
TRIO-205ENST00000503399 NUP155O75694 1391 aa20.03■□□□□ 0.8
TRIO-205ENST00000503399 PTPRUQ92729 1446 aa20.02■□□□□ 0.8
TRIO-205ENST00000503399 NUTM2BA6NNL0 878 aaPredicted RBP20.02■□□□□ 0.8
TRIO-205ENST00000503399 NUTM2EB1AL46 878 aaPredicted RBP20.02■□□□□ 0.8
TRIO-205ENST00000503399 ITGAEP38570 1179 aa20.02■□□□□ 0.8
TRIO-205ENST00000503399 NUTM2AQ8IVF1 878 aaPredicted RBP20.02■□□□□ 0.8
TRIO-205ENST00000503399 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
TRIO-205ENST00000503399 BRINP3Q76B58 766 aa20.01■□□□□ 0.79
TRIO-205ENST00000503399 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
TRIO-205ENST00000503399 DCCP43146 1447 aa19.97■□□□□ 0.79
TRIO-205ENST00000503399 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
TRIO-205ENST00000503399 UPF1Q92900 1129 aaKnown RBP eCLIP19.97■□□□□ 0.79
TRIO-205ENST00000503399 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
TRIO-205ENST00000503399 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
TRIO-205ENST00000503399 RXRBP28702 533 aa19.96■□□□□ 0.79
TRIO-205ENST00000503399 SPHKAPQ2M3C7 1700 aa19.95■□□□□ 0.78
TRIO-205ENST00000503399 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
TRIO-205ENST00000503399 MST1RQ04912 1400 aa19.93■□□□□ 0.78
TRIO-205ENST00000503399 AFF2P51816 1311 aa19.93■□□□□ 0.78
TRIO-205ENST00000503399 METP08581 1390 aa19.92■□□□□ 0.78
TRIO-205ENST00000503399 NHSL1Q5SYE7 1610 aa19.91■□□□□ 0.78
TRIO-205ENST00000503399 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
TRIO-205ENST00000503399 DDX17Q92841 729 aaKnown RBP19.89■□□□□ 0.77
TRIO-205ENST00000503399 C8orf37Q96NL8 207 aa19.89■□□□□ 0.77
TRIO-205ENST00000503399 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
TRIO-205ENST00000503399 ADGRL3Q9HAR2 1447 aa19.88■□□□□ 0.77
TRIO-205ENST00000503399 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
TRIO-205ENST00000503399 LRRC59Q96AG4 307 aaKnown RBP19.88■□□□□ 0.77
TRIO-205ENST00000503399 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
TRIO-205ENST00000503399 CLTCL1P53675 1640 aa19.86■□□□□ 0.77
TRIO-205ENST00000503399 PNPLA6Q8IY17 1366 aa19.85■□□□□ 0.77
TRIO-205ENST00000503399 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
TRIO-205ENST00000503399 RGS12O14924 1447 aa19.83■□□□□ 0.76
TRIO-205ENST00000503399 ADAMTS2O95450 1211 aa19.82■□□□□ 0.76
TRIO-205ENST00000503399 QTRT2Q9H974 415 aaKnown RBP19.82■□□□□ 0.76
TRIO-205ENST00000503399 KIF1BO60333 1816 aa19.81■□□□□ 0.76
TRIO-205ENST00000503399 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
TRIO-205ENST00000503399 RBM6P78332 1123 aaKnown RBP19.8■□□□□ 0.76
TRIO-205ENST00000503399 NGLY1Q96IV0 654 aa19.79■□□□□ 0.76
TRIO-205ENST00000503399 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
TRIO-205ENST00000503399 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
TRIO-205ENST00000503399 ORAI2Q96SN7 254 aa19.75■□□□□ 0.75
TRIO-205ENST00000503399 VGFO15240 615 aaPredicted RBP19.74■□□□□ 0.75
TRIO-205ENST00000503399 LAMC1P11047 1609 aa19.73■□□□□ 0.75
TRIO-205ENST00000503399 USP21Q9UK80 565 aa19.72■□□□□ 0.75
TRIO-205ENST00000503399 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
TRIO-205ENST00000503399 NAIPQ13075 1403 aa19.71■□□□□ 0.75
TRIO-205ENST00000503399 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
TRIO-205ENST00000503399 TRPC5Q9UL62 973 aaPredicted RBP19.69■□□□□ 0.74
TRIO-205ENST00000503399 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
TRIO-205ENST00000503399 PPLO60437 1756 aa19.66■□□□□ 0.74
TRIO-205ENST00000503399 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
TRIO-205ENST00000503399 PRAG1Q86YV5 1406 aa19.66■□□□□ 0.74
TRIO-205ENST00000503399 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
TRIO-205ENST00000503399 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms