RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
NIPBL-203ENST00000503274 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
NIPBL-203ENST00000503274 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
NIPBL-203ENST00000503274 PARP9Q8IXQ6 854 aa12.94□□□□□ -0.34
NIPBL-203ENST00000503274 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
NIPBL-203ENST00000503274 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
NIPBL-203ENST00000503274 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
NIPBL-203ENST00000503274 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
NIPBL-203ENST00000503274 SAMD7Q7Z3H4 446 aa12.92□□□□□ -0.34
NIPBL-203ENST00000503274 REPIN1Q9BWE0 567 aaKnown RBP12.92□□□□□ -0.34
NIPBL-203ENST00000503274 GIGYF2Q6Y7W6 1299 aaKnown RBP12.9□□□□□ -0.34
NIPBL-203ENST00000503274 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
NIPBL-203ENST00000503274 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
NIPBL-203ENST00000503274 HCSTQ9UBK5 93 aa12.9□□□□□ -0.34
NIPBL-203ENST00000503274 WNT2BQ93097 391 aa12.89□□□□□ -0.35
NIPBL-203ENST00000503274 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
NIPBL-203ENST00000503274 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
NIPBL-203ENST00000503274 KDM4CQ9H3R0 1056 aa12.88□□□□□ -0.35
NIPBL-203ENST00000503274 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
NIPBL-203ENST00000503274 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
NIPBL-203ENST00000503274 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
NIPBL-203ENST00000503274 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
NIPBL-203ENST00000503274 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
NIPBL-203ENST00000503274 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
NIPBL-203ENST00000503274 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
NIPBL-203ENST00000503274 SOWAHBA6NEL2 793 aa12.84□□□□□ -0.35
NIPBL-203ENST00000503274 RNF40O75150 1001 aa12.83□□□□□ -0.36
NIPBL-203ENST00000503274 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
NIPBL-203ENST00000503274 MS4A1P11836 297 aa12.82□□□□□ -0.36
NIPBL-203ENST00000503274 BCAMP50895 628 aa12.82□□□□□ -0.36
NIPBL-203ENST00000503274 PTPN5P54829 565 aa12.81□□□□□ -0.36
NIPBL-203ENST00000503274 THSD4Q6ZMP0 1018 aa12.81□□□□□ -0.36
NIPBL-203ENST00000503274 RDH13Q8NBN7 331 aa12.8□□□□□ -0.36
NIPBL-203ENST00000503274 SLC10A3P09131 477 aa12.79□□□□□ -0.36
NIPBL-203ENST00000503274 CD46P15529 392 aa12.79□□□□□ -0.36
NIPBL-203ENST00000503274 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
NIPBL-203ENST00000503274 PPP4CP60510 307 aa12.78□□□□□ -0.36
NIPBL-203ENST00000503274 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
NIPBL-203ENST00000503274 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
NIPBL-203ENST00000503274 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
NIPBL-203ENST00000503274 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
NIPBL-203ENST00000503274 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
NIPBL-203ENST00000503274 CFHP08603 1231 aa12.73□□□□□ -0.37
NIPBL-203ENST00000503274 GCGRP47871 477 aa12.73□□□□□ -0.37
NIPBL-203ENST00000503274 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
NIPBL-203ENST00000503274 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
NIPBL-203ENST00000503274 KMT5BQ4FZB7 885 aa12.71□□□□□ -0.37
NIPBL-203ENST00000503274 PLEKHG3A1L390 1219 aa12.69□□□□□ -0.38
NIPBL-203ENST00000503274 PRR14Q9BWN1 585 aa12.69□□□□□ -0.38
NIPBL-203ENST00000503274 KDM4AO75164 1064 aa12.68□□□□□ -0.38
NIPBL-203ENST00000503274 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
NIPBL-203ENST00000503274 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
NIPBL-203ENST00000503274 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
NIPBL-203ENST00000503274 APLP1P51693 650 aa12.66□□□□□ -0.38
NIPBL-203ENST00000503274 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
NIPBL-203ENST00000503274 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
NIPBL-203ENST00000503274 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
NIPBL-203ENST00000503274 USP46P62068 366 aa12.64□□□□□ -0.39
NIPBL-203ENST00000503274 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
NIPBL-203ENST00000503274 FUT2Q10981 343 aa12.63□□□□□ -0.39
NIPBL-203ENST00000503274 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
NIPBL-203ENST00000503274 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
NIPBL-203ENST00000503274 TMEM132AQ24JP5 1023 aa12.6□□□□□ -0.39
NIPBL-203ENST00000503274 HOXA2O43364 376 aa12.59□□□□□ -0.39
NIPBL-203ENST00000503274 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
NIPBL-203ENST00000503274 MYSM1Q5VVJ2 828 aa12.59□□□□□ -0.39
NIPBL-203ENST00000503274 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
NIPBL-203ENST00000503274 MOXD2PA6NHM9 499 aa12.57□□□□□ -0.4
NIPBL-203ENST00000503274 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
NIPBL-203ENST00000503274 NDUFV2P19404 249 aa12.56□□□□□ -0.4
NIPBL-203ENST00000503274 SKIV2LQ15477 1246 aaKnown RBP12.56□□□□□ -0.4
NIPBL-203ENST00000503274 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
NIPBL-203ENST00000503274 MORN1Q5T089 497 aa12.55□□□□□ -0.4
NIPBL-203ENST00000503274 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
NIPBL-203ENST00000503274 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
NIPBL-203ENST00000503274 SPTLC1O15269 473 aa12.54□□□□□ -0.4
NIPBL-203ENST00000503274 GJA5P36382 358 aa12.54□□□□□ -0.4
NIPBL-203ENST00000503274 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
NIPBL-203ENST00000503274 HLA-CQ95604 372 aa12.54□□□□□ -0.4
NIPBL-203ENST00000503274 FDX1P10109 184 aa12.53□□□□□ -0.4
NIPBL-203ENST00000503274 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
NIPBL-203ENST00000503274 BLOC1S3Q6QNY0 202 aa12.53□□□□□ -0.4
NIPBL-203ENST00000503274 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
NIPBL-203ENST00000503274 NR1I2O75469 434 aa12.51□□□□□ -0.41
NIPBL-203ENST00000503274 COPS2P61201 443 aa12.51□□□□□ -0.41
NIPBL-203ENST00000503274 SCUBE3Q8IX30 993 aa12.51□□□□□ -0.41
NIPBL-203ENST00000503274 MTRQ99707 1265 aa12.51□□□□□ -0.41
NIPBL-203ENST00000503274 LIMD1Q9UGP4 676 aa12.51□□□□□ -0.41
NIPBL-203ENST00000503274 SLC27A5Q9Y2P5 690 aa12.51□□□□□ -0.41
NIPBL-203ENST00000503274 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
NIPBL-203ENST00000503274 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
NIPBL-203ENST00000503274 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
NIPBL-203ENST00000503274 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
NIPBL-203ENST00000503274 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
NIPBL-203ENST00000503274 PROCA1Q8NCQ7 364 aaPredicted RBP12.49□□□□□ -0.41
NIPBL-203ENST00000503274 PCDHGC3Q9UN70 934 aa12.49□□□□□ -0.41
NIPBL-203ENST00000503274 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
NIPBL-203ENST00000503274 IL21Q9HBE4 155 aa12.48□□□□□ -0.41
NIPBL-203ENST00000503274 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
NIPBL-203ENST00000503274 Q3C1V9 767 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms