RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 KIF15Q9NS87 1388 aa12.41□□□□□ -0.42
PDE4D-210ENST00000503258 ANKRD30AQ9BXX3 1397 aa12.39□□□□□ -0.43
PDE4D-210ENST00000503258 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
PDE4D-210ENST00000503258 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
PDE4D-210ENST00000503258 EID1Q9Y6B2 187 aa12.39□□□□□ -0.43
PDE4D-210ENST00000503258 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
PDE4D-210ENST00000503258 JCADQ9P266 1359 aa12.39□□□□□ -0.43
PDE4D-210ENST00000503258 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.38□□□□□ -0.43
PDE4D-210ENST00000503258 E9PCH4 1651 aa12.37□□□□□ -0.43
PDE4D-210ENST00000503258 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
PDE4D-210ENST00000503258 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
PDE4D-210ENST00000503258 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
PDE4D-210ENST00000503258 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
PDE4D-210ENST00000503258 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
PDE4D-210ENST00000503258 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
PDE4D-210ENST00000503258 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.43
PDE4D-210ENST00000503258 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDE4D-210ENST00000503258 LTKP29376 864 aa12.33□□□□□ -0.44
PDE4D-210ENST00000503258 MSH6P52701 1360 aa12.33□□□□□ -0.44
PDE4D-210ENST00000503258 TMEM94Q12767 1356 aa12.33□□□□□ -0.44
PDE4D-210ENST00000503258 SPHKAPQ2M3C7 1700 aa12.33□□□□□ -0.44
PDE4D-210ENST00000503258 PHF23Q9BUL5 403 aaPredicted RBP12.32□□□□□ -0.44
PDE4D-210ENST00000503258 ADAMTS13Q76LX8 1427 aa12.32□□□□□ -0.44
PDE4D-210ENST00000503258 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
PDE4D-210ENST00000503258 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
PDE4D-210ENST00000503258 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
PDE4D-210ENST00000503258 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
PDE4D-210ENST00000503258 KNDC1Q76NI1 1749 aa12.28□□□□□ -0.44
PDE4D-210ENST00000503258 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
PDE4D-210ENST00000503258 PTCH1Q13635 1447 aa12.27□□□□□ -0.45
PDE4D-210ENST00000503258 LRP6O75581 1613 aa12.26□□□□□ -0.45
PDE4D-210ENST00000503258 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
PDE4D-210ENST00000503258 ANKRD50Q9ULJ7 1429 aa12.25□□□□□ -0.45
PDE4D-210ENST00000503258 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
PDE4D-210ENST00000503258 IDI1Q13907 227 aa12.23□□□□□ -0.45
PDE4D-210ENST00000503258 NEXMIFQ5QGS0 1516 aa12.23□□□□□ -0.45
PDE4D-210ENST00000503258 CFAP65Q6ZU64 1925 aaKnown RBP12.23□□□□□ -0.45
PDE4D-210ENST00000503258 CDC42BPGQ6DT37 1551 aa12.22□□□□□ -0.45
PDE4D-210ENST00000503258 KIF1BO60333 1816 aa12.22□□□□□ -0.45
PDE4D-210ENST00000503258 MST1RQ04912 1400 aa12.21□□□□□ -0.45
PDE4D-210ENST00000503258 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.45
PDE4D-210ENST00000503258 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
PDE4D-210ENST00000503258 LRP5O75197 1615 aa12.21□□□□□ -0.46
PDE4D-210ENST00000503258 SLAIN2Q9P270 581 aa12.2□□□□□ -0.46
PDE4D-210ENST00000503258 KIF1AQ12756 1690 aa12.2□□□□□ -0.46
PDE4D-210ENST00000503258 POTEAQ6S8J7 498 aa12.19□□□□□ -0.46
PDE4D-210ENST00000503258 IFT172Q9UG01 1749 aa12.19□□□□□ -0.46
PDE4D-210ENST00000503258 C19orf44Q9H6X5 657 aa12.19□□□□□ -0.46
PDE4D-210ENST00000503258 PPLO60437 1756 aa12.18□□□□□ -0.46
PDE4D-210ENST00000503258 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
PDE4D-210ENST00000503258 PTPRUQ92729 1446 aa12.17□□□□□ -0.46
PDE4D-210ENST00000503258 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
PDE4D-210ENST00000503258 FOXD1Q16676 465 aa12.16□□□□□ -0.46
PDE4D-210ENST00000503258 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-210ENST00000503258 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
PDE4D-210ENST00000503258 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
PDE4D-210ENST00000503258 CLTCL1P53675 1640 aa12.15□□□□□ -0.46
PDE4D-210ENST00000503258 TECPR2O15040 1411 aa12.15□□□□□ -0.46
PDE4D-210ENST00000503258 HFM1A2PYH4 1435 aa12.14□□□□□ -0.47
PDE4D-210ENST00000503258 ATRNO75882 1429 aa12.13□□□□□ -0.47
PDE4D-210ENST00000503258 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
PDE4D-210ENST00000503258 PNPLA6Q8IY17 1366 aa12.12□□□□□ -0.47
PDE4D-210ENST00000503258 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDE4D-210ENST00000503258 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
PDE4D-210ENST00000503258 MYOM2P54296 1465 aa12.11□□□□□ -0.47
PDE4D-210ENST00000503258 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
PDE4D-210ENST00000503258 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
PDE4D-210ENST00000503258 RGS12O14924 1447 aa12.09□□□□□ -0.47
PDE4D-210ENST00000503258 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
PDE4D-210ENST00000503258 ADGRB2O60241 1585 aa12.08□□□□□ -0.47
PDE4D-210ENST00000503258 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.48
PDE4D-210ENST00000503258 ABCA3Q99758 1704 aa12.08□□□□□ -0.48
PDE4D-210ENST00000503258 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
PDE4D-210ENST00000503258 SOS2Q07890 1332 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-210ENST00000503258 PXDNQ92626 1479 aa12.07□□□□□ -0.48
PDE4D-210ENST00000503258 BRINP3Q76B58 766 aa12.07□□□□□ -0.48
PDE4D-210ENST00000503258 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
PDE4D-210ENST00000503258 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
PDE4D-210ENST00000503258 ATF3P18847 181 aa12.06□□□□□ -0.48
PDE4D-210ENST00000503258 RXRBP28702 533 aa12.05□□□□□ -0.48
PDE4D-210ENST00000503258 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
PDE4D-210ENST00000503258 RRBP1Q9P2E9 1410 aaKnown RBP12.05□□□□□ -0.48
PDE4D-210ENST00000503258 DLC1Q96QB1 1528 aa12.05□□□□□ -0.48
PDE4D-210ENST00000503258 FNBP4Q8N3X1 1017 aaPredicted RBP12.04□□□□□ -0.48
PDE4D-210ENST00000503258 NRXN1Q9ULB1 1477 aa12.03□□□□□ -0.48
PDE4D-210ENST00000503258 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
PDE4D-210ENST00000503258 SLC26A8Q96RN1 970 aa12.03□□□□□ -0.48
PDE4D-210ENST00000503258 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
PDE4D-210ENST00000503258 RGPD1P0DJD0 1748 aa12.02□□□□□ -0.48
PDE4D-210ENST00000503258 CRYBG1Q9Y4K1 1723 aa12.02□□□□□ -0.48
PDE4D-210ENST00000503258 LRPPRCP42704 1394 aaKnown RBP12.02□□□□□ -0.49
PDE4D-210ENST00000503258 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
PDE4D-210ENST00000503258 SLIT2O94813 1529 aa12.01□□□□□ -0.49
PDE4D-210ENST00000503258 APLP2Q06481 763 aa12.01□□□□□ -0.49
PDE4D-210ENST00000503258 AMOTL2Q9Y2J4 779 aa12.01□□□□□ -0.49
PDE4D-210ENST00000503258 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
PDE4D-210ENST00000503258 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
PDE4D-210ENST00000503258 PLCH1Q4KWH8 1693 aa12□□□□□ -0.49
PDE4D-210ENST00000503258 NGLY1Q96IV0 654 aa12□□□□□ -0.49
PDE4D-210ENST00000503258 DISP2A7MBM2 1401 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms