RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ZFYVE9O95405 1425 aa24.75■■□□□ 1.55
SCLT1-204ENST00000503215 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
SCLT1-204ENST00000503215 TMEM131LA2VDJ0 1609 aa24.74■■□□□ 1.55
SCLT1-204ENST00000503215 RIMS2Q9UQ26 1411 aa24.73■■□□□ 1.55
SCLT1-204ENST00000503215 NUTM2DQ5VT03 806 aaPredicted RBP24.73■■□□□ 1.55
SCLT1-204ENST00000503215 RBM33Q96EV2 1170 aaKnown RBP24.73■■□□□ 1.55
SCLT1-204ENST00000503215 BCANQ96GW7 911 aa24.73■■□□□ 1.55
SCLT1-204ENST00000503215 KCNA6P17658 529 aa24.72■■□□□ 1.55
SCLT1-204ENST00000503215 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
SCLT1-204ENST00000503215 NAIPQ13075 1403 aa24.68■■□□□ 1.54
SCLT1-204ENST00000503215 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
SCLT1-204ENST00000503215 TMEM94Q12767 1356 aa24.68■■□□□ 1.54
SCLT1-204ENST00000503215 PLEKHG1Q9ULL1 1385 aa24.67■■□□□ 1.54
SCLT1-204ENST00000503215 PROSER2Q86WR7 435 aaPredicted RBP24.67■■□□□ 1.54
SCLT1-204ENST00000503215 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.53
SCLT1-204ENST00000503215 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.61■■□□□ 1.53
SCLT1-204ENST00000503215 TBX22Q9Y458 520 aa24.6■■□□□ 1.53
SCLT1-204ENST00000503215 ADAMTS13Q76LX8 1427 aa24.59■■□□□ 1.53
SCLT1-204ENST00000503215 NWD1Q149M9 1564 aa24.58■■□□□ 1.52
SCLT1-204ENST00000503215 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
SCLT1-204ENST00000503215 HFM1A2PYH4 1435 aa24.56■■□□□ 1.52
SCLT1-204ENST00000503215 NKTRP30414 1462 aaKnown RBP24.55■■□□□ 1.52
SCLT1-204ENST00000503215 SPHKAPQ2M3C7 1700 aa24.54■■□□□ 1.52
SCLT1-204ENST00000503215 CHD2O14647 1828 aaKnown RBP24.53■■□□□ 1.52
SCLT1-204ENST00000503215 ZNF326Q5BKZ1 582 aaKnown RBP24.52■■□□□ 1.52
SCLT1-204ENST00000503215 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
SCLT1-204ENST00000503215 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
SCLT1-204ENST00000503215 CLTCL1P53675 1640 aa24.5■■□□□ 1.51
SCLT1-204ENST00000503215 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
SCLT1-204ENST00000503215 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
SCLT1-204ENST00000503215 MSH6P52701 1360 aa24.47■■□□□ 1.51
SCLT1-204ENST00000503215 TRPM2O94759 1503 aa24.47■■□□□ 1.51
SCLT1-204ENST00000503215 SOCS7O14512 581 aa24.46■■□□□ 1.51
SCLT1-204ENST00000503215 FOXD1Q16676 465 aa24.46■■□□□ 1.51
SCLT1-204ENST00000503215 AMOTL2Q9Y2J4 779 aa24.46■■□□□ 1.51
SCLT1-204ENST00000503215 SLAIN2Q9P270 581 aa24.45■■□□□ 1.5
SCLT1-204ENST00000503215 NRXN3Q9Y4C0 1643 aa24.44■■□□□ 1.5
SCLT1-204ENST00000503215 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
SCLT1-204ENST00000503215 DIP2AQ14689 1571 aa24.43■■□□□ 1.5
SCLT1-204ENST00000503215 C14orf37Q86TY3 774 aa24.42■■□□□ 1.5
SCLT1-204ENST00000503215 METP08581 1390 aa24.42■■□□□ 1.5
SCLT1-204ENST00000503215 ROBO1Q9Y6N7 1651 aa24.41■■□□□ 1.5
SCLT1-204ENST00000503215 NEXMIFQ5QGS0 1516 aa24.41■■□□□ 1.5
SCLT1-204ENST00000503215 SETBP1Q9Y6X0 1596 aa24.4■■□□□ 1.5
SCLT1-204ENST00000503215 NCOA3Q9Y6Q9 1424 aa24.38■■□□□ 1.49
SCLT1-204ENST00000503215 C19orf44Q9H6X5 657 aa24.37■■□□□ 1.49
SCLT1-204ENST00000503215 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
SCLT1-204ENST00000503215 KIF1BO60333 1816 aa24.35■■□□□ 1.49
SCLT1-204ENST00000503215 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
SCLT1-204ENST00000503215 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.33■■□□□ 1.49
SCLT1-204ENST00000503215 ATF3P18847 181 aa24.32■■□□□ 1.48
SCLT1-204ENST00000503215 RGS17Q9UGC6 210 aaPredicted RBP24.32■■□□□ 1.48
SCLT1-204ENST00000503215 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
SCLT1-204ENST00000503215 CADPS2Q86UW7 1296 aa24.31■■□□□ 1.48
SCLT1-204ENST00000503215 VGFO15240 615 aaPredicted RBP24.29■■□□□ 1.48
SCLT1-204ENST00000503215 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
SCLT1-204ENST00000503215 RGL3Q3MIN7 710 aa24.26■■□□□ 1.47
SCLT1-204ENST00000503215 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
SCLT1-204ENST00000503215 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
SCLT1-204ENST00000503215 BRINP3Q76B58 766 aa24.24■■□□□ 1.47
SCLT1-204ENST00000503215 ADGRF5Q8IZF2 1346 aa24.23■■□□□ 1.47
SCLT1-204ENST00000503215 CCDC144AA2RUR9 1427 aa24.22■■□□□ 1.47
SCLT1-204ENST00000503215 ROBO2Q9HCK4 1378 aa24.21■■□□□ 1.47
SCLT1-204ENST00000503215 SPATA31E1Q6ZUB1 1445 aa24.21■■□□□ 1.47
SCLT1-204ENST00000503215 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
SCLT1-204ENST00000503215 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
SCLT1-204ENST00000503215 PPLO60437 1756 aa24.21■■□□□ 1.47
SCLT1-204ENST00000503215 JCADQ9P266 1359 aa24.2■■□□□ 1.47
SCLT1-204ENST00000503215 DCCP43146 1447 aa24.19■■□□□ 1.46
SCLT1-204ENST00000503215 MST1RQ04912 1400 aa24.19■■□□□ 1.46
SCLT1-204ENST00000503215 ADGRL3Q9HAR2 1447 aa24.18■■□□□ 1.46
SCLT1-204ENST00000503215 RAB3GAP2Q9H2M9 1393 aa24.18■■□□□ 1.46
SCLT1-204ENST00000503215 POTEAQ6S8J7 498 aa24.17■■□□□ 1.46
SCLT1-204ENST00000503215 DDX17Q92841 729 aaKnown RBP24.16■■□□□ 1.46
SCLT1-204ENST00000503215 AHDC1Q5TGY3 1603 aaPredicted RBP24.15■■□□□ 1.46
SCLT1-204ENST00000503215 NALCNQ8IZF0 1738 aa24.15■■□□□ 1.46
SCLT1-204ENST00000503215 PTCH1Q13635 1447 aa24.14■■□□□ 1.45
SCLT1-204ENST00000503215 ASXL1Q8IXJ9 1541 aa24.13■■□□□ 1.45
SCLT1-204ENST00000503215 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
SCLT1-204ENST00000503215 STK26Q9P289 416 aa24.11■■□□□ 1.45
SCLT1-204ENST00000503215 LRP6O75581 1613 aa24.1■■□□□ 1.45
SCLT1-204ENST00000503215 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
SCLT1-204ENST00000503215 PRAG1Q86YV5 1406 aa24.09■■□□□ 1.45
SCLT1-204ENST00000503215 C1orf167Q5SNV9 1468 aa24.08■■□□□ 1.45
SCLT1-204ENST00000503215 WAPLQ7Z5K2 1190 aa24.07■■□□□ 1.44
SCLT1-204ENST00000503215 ORAI2Q96SN7 254 aa24.07■■□□□ 1.44
SCLT1-204ENST00000503215 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
SCLT1-204ENST00000503215 IFT172Q9UG01 1749 aa24.06■■□□□ 1.44
SCLT1-204ENST00000503215 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
SCLT1-204ENST00000503215 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
SCLT1-204ENST00000503215 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
SCLT1-204ENST00000503215 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
SCLT1-204ENST00000503215 PIK3C2GO75747 1445 aa24.04■■□□□ 1.44
SCLT1-204ENST00000503215 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
SCLT1-204ENST00000503215 NHSL1Q5SYE7 1610 aa24.02■■□□□ 1.44
SCLT1-204ENST00000503215 PLEKHH1Q9ULM0 1364 aa24.02■■□□□ 1.44
SCLT1-204ENST00000503215 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
SCLT1-204ENST00000503215 MEX3CQ5U5Q3 659 aaKnown RBP24.02■■□□□ 1.44
SCLT1-204ENST00000503215 CFAP70Q5T0N1 1121 aa24.01■■□□□ 1.43
SCLT1-204ENST00000503215 C14orf93Q9H972 538 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms