RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 SLC52A1Q9NWF4 448 aa28.4■■■□□ 2.14
HERC6-204ENST00000502870 NOS1P29475 1434 aa28.4■■■□□ 2.14
HERC6-204ENST00000502870 SPATA31A6Q5VVP1 1343 aa28.4■■■□□ 2.14
HERC6-204ENST00000502870 ZNF772Q68DY9 489 aaPredicted RBP28.39■■■□□ 2.14
HERC6-204ENST00000502870 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.14
HERC6-204ENST00000502870 DAPK1P53355 1430 aa28.38■■■□□ 2.13
HERC6-204ENST00000502870 MEX3CQ5U5Q3 659 aaKnown RBP28.38■■■□□ 2.13
HERC6-204ENST00000502870 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
HERC6-204ENST00000502870 HDGFP51858 240 aaKnown RBP28.36■■■□□ 2.13
HERC6-204ENST00000502870 NCOA3Q9Y6Q9 1424 aa28.35■■■□□ 2.13
HERC6-204ENST00000502870 PLEKHG1Q9ULL1 1385 aa28.34■■■□□ 2.13
HERC6-204ENST00000502870 PPP1R15AO75807 674 aaPredicted RBP28.33■■■□□ 2.13
HERC6-204ENST00000502870 UPF1Q92900 1129 aaKnown RBP eCLIP28.32■■■□□ 2.12
HERC6-204ENST00000502870 RPRD2Q5VT52 1461 aaKnown RBP28.32■■■□□ 2.12
HERC6-204ENST00000502870 SHPRHQ149N8 1683 aa28.32■■■□□ 2.12
HERC6-204ENST00000502870 C14orf37Q86TY3 774 aa28.31■■■□□ 2.12
HERC6-204ENST00000502870 LRP6O75581 1613 aa28.31■■■□□ 2.12
HERC6-204ENST00000502870 MYO5BQ9ULV0 1848 aa28.3■■■□□ 2.12
HERC6-204ENST00000502870 AHDC1Q5TGY3 1603 aaPredicted RBP28.29■■■□□ 2.12
HERC6-204ENST00000502870 ZFYVE9O95405 1425 aa28.29■■■□□ 2.12
HERC6-204ENST00000502870 TRIM52Q96A61 297 aa28.28■■■□□ 2.12
HERC6-204ENST00000502870 GCC2Q8IWJ2 1684 aa28.28■■■□□ 2.12
HERC6-204ENST00000502870 CADPS2Q86UW7 1296 aa28.27■■■□□ 2.12
HERC6-204ENST00000502870 RIMS2Q9UQ26 1411 aa28.26■■■□□ 2.12
HERC6-204ENST00000502870 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.24■■■□□ 2.11
HERC6-204ENST00000502870 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
HERC6-204ENST00000502870 TBX22Q9Y458 520 aa28.24■■■□□ 2.11
HERC6-204ENST00000502870 ATF3P18847 181 aa28.23■■■□□ 2.11
HERC6-204ENST00000502870 RXRBP28702 533 aa28.23■■■□□ 2.11
HERC6-204ENST00000502870 DIP2AQ14689 1571 aa28.23■■■□□ 2.11
HERC6-204ENST00000502870 CDK12Q9NYV4 1490 aaPredicted RBP28.22■■■□□ 2.11
HERC6-204ENST00000502870 APLP2Q06481 763 aa28.22■■■□□ 2.11
HERC6-204ENST00000502870 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.22■■■□□ 2.11
HERC6-204ENST00000502870 TMEM131LA2VDJ0 1609 aa28.21■■■□□ 2.11
HERC6-204ENST00000502870 C19orf44Q9H6X5 657 aa28.21■■■□□ 2.11
HERC6-204ENST00000502870 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
HERC6-204ENST00000502870 ADGRL2O95490 1459 aa28.17■■■□□ 2.1
HERC6-204ENST00000502870 ADAMTS13Q76LX8 1427 aa28.12■■■□□ 2.09
HERC6-204ENST00000502870 ANKRD50Q9ULJ7 1429 aa28.12■■■□□ 2.09
HERC6-204ENST00000502870 TRPM2O94759 1503 aa28.12■■■□□ 2.09
HERC6-204ENST00000502870 NUTM2BA6NNL0 878 aaPredicted RBP28.11■■■□□ 2.09
HERC6-204ENST00000502870 NUTM2EB1AL46 878 aaPredicted RBP28.11■■■□□ 2.09
HERC6-204ENST00000502870 CHGAP10645 457 aaKnown RBP28.11■■■□□ 2.09
HERC6-204ENST00000502870 NUTM2AQ8IVF1 878 aaPredicted RBP28.11■■■□□ 2.09
HERC6-204ENST00000502870 DCCP43146 1447 aa28.09■■■□□ 2.09
HERC6-204ENST00000502870 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
HERC6-204ENST00000502870 AFF2P51816 1311 aa28.08■■■□□ 2.09
HERC6-204ENST00000502870 ASXL1Q8IXJ9 1541 aa28.05■■■□□ 2.08
HERC6-204ENST00000502870 SETD5Q9C0A6 1442 aa28.04■■■□□ 2.08
HERC6-204ENST00000502870 NHSL1Q5SYE7 1610 aa28.03■■■□□ 2.08
HERC6-204ENST00000502870 AMOTL2Q9Y2J4 779 aa28.03■■■□□ 2.08
HERC6-204ENST00000502870 UNC13BO14795 1591 aa28.03■■■□□ 2.08
HERC6-204ENST00000502870 LOC105371045A0A1W2PR82 267 aa28.02■■■□□ 2.08
HERC6-204ENST00000502870 NUTM2DQ5VT03 806 aaPredicted RBP28.02■■■□□ 2.08
HERC6-204ENST00000502870 E9PCH4 1651 aa28.02■■■□□ 2.08
HERC6-204ENST00000502870 LRRC59Q96AG4 307 aaKnown RBP28.01■■■□□ 2.07
HERC6-204ENST00000502870 RBM6P78332 1123 aaKnown RBP27.99■■■□□ 2.07
HERC6-204ENST00000502870 RGS12O14924 1447 aa27.98■■■□□ 2.07
HERC6-204ENST00000502870 FAM50AQ14320 339 aaKnown RBP27.97■■■□□ 2.07
HERC6-204ENST00000502870 XRN1Q8IZH2 1706 aaKnown RBP27.97■■■□□ 2.07
HERC6-204ENST00000502870 MST1RQ04912 1400 aa27.96■■■□□ 2.07
HERC6-204ENST00000502870 PTPRUQ92729 1446 aa27.96■■■□□ 2.07
HERC6-204ENST00000502870 C8orf37Q96NL8 207 aa27.95■■■□□ 2.06
HERC6-204ENST00000502870 QTRT2Q9H974 415 aaKnown RBP27.95■■■□□ 2.06
HERC6-204ENST00000502870 FOXD1Q16676 465 aa27.94■■■□□ 2.06
HERC6-204ENST00000502870 IQGAP3Q86VI3 1631 aa27.92■■■□□ 2.06
HERC6-204ENST00000502870 NGLY1Q96IV0 654 aa27.92■■■□□ 2.06
HERC6-204ENST00000502870 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
HERC6-204ENST00000502870 PNPLA6Q8IY17 1366 aa27.9■■■□□ 2.06
HERC6-204ENST00000502870 SRCAPQ6ZRS2 3230 aa27.9■■■□□ 2.06
HERC6-204ENST00000502870 ATAD2Q6PL18 1390 aa27.89■■■□□ 2.06
HERC6-204ENST00000502870 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.05
HERC6-204ENST00000502870 ADGRL3Q9HAR2 1447 aa27.86■■■□□ 2.05
HERC6-204ENST00000502870 NALCNQ8IZF0 1738 aa27.82■■■□□ 2.04
HERC6-204ENST00000502870 ADAMTS2O95450 1211 aa27.8■■■□□ 2.04
HERC6-204ENST00000502870 NUP155O75694 1391 aa27.79■■■□□ 2.04
HERC6-204ENST00000502870 ROCK1Q13464 1354 aa27.79■■■□□ 2.04
HERC6-204ENST00000502870 ZRANB1Q9UGI0 708 aa27.79■■■□□ 2.04
HERC6-204ENST00000502870 SPHKAPQ2M3C7 1700 aa27.78■■■□□ 2.04
HERC6-204ENST00000502870 LAMC1P11047 1609 aa27.78■■■□□ 2.04
HERC6-204ENST00000502870 ZNF326Q5BKZ1 582 aaKnown RBP27.78■■■□□ 2.04
HERC6-204ENST00000502870 DDX17Q92841 729 aaKnown RBP27.78■■■□□ 2.04
HERC6-204ENST00000502870 METP08581 1390 aa27.77■■■□□ 2.04
HERC6-204ENST00000502870 TRPC5Q9UL62 973 aaPredicted RBP27.77■■■□□ 2.04
HERC6-204ENST00000502870 USP21Q9UK80 565 aa27.76■■■□□ 2.03
HERC6-204ENST00000502870 PTCH1Q13635 1447 aa27.75■■■□□ 2.03
HERC6-204ENST00000502870 C1orf167Q5SNV9 1468 aa27.74■■■□□ 2.03
HERC6-204ENST00000502870 CCDC125Q86Z20 511 aa27.7■■■□□ 2.02
HERC6-204ENST00000502870 SOS2Q07890 1332 aaPredicted RBP27.69■■■□□ 2.02
HERC6-204ENST00000502870 FNBP4Q8N3X1 1017 aaPredicted RBP27.68■■■□□ 2.02
HERC6-204ENST00000502870 COL22A1Q8NFW1 1626 aaPredicted RBP27.67■■■□□ 2.02
HERC6-204ENST00000502870 ATRNO75882 1429 aa27.67■■■□□ 2.02
HERC6-204ENST00000502870 EP400Q96L91 3159 aa27.66■■■□□ 2.02
HERC6-204ENST00000502870 NEXMIFQ5QGS0 1516 aa27.66■■■□□ 2.02
HERC6-204ENST00000502870 KIF1BO60333 1816 aa27.64■■■□□ 2.01
HERC6-204ENST00000502870 MARF1Q9Y4F3 1742 aaKnown RBP27.61■■■□□ 2.01
HERC6-204ENST00000502870 ORAI2Q96SN7 254 aa27.61■■■□□ 2.01
HERC6-204ENST00000502870 CLTCL1P53675 1640 aa27.59■■■□□ 2.01
HERC6-204ENST00000502870 MYOM2P54296 1465 aa27.57■■■□□ 2
HERC6-204ENST00000502870 NPHP3Q7Z494 1330 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms