RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 KIF1BO60333 1816 aa36.93■■■■□ 3.5
LSM6-202ENST00000502781 HDGFP51858 240 aaKnown RBP36.92■■■■□ 3.5
LSM6-202ENST00000502781 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.91■■■■□ 3.5
LSM6-202ENST00000502781 SPATA31E1Q6ZUB1 1445 aa36.9■■■■□ 3.5
LSM6-202ENST00000502781 PCGF6Q9BYE7 350 aa36.89■■■■□ 3.5
LSM6-202ENST00000502781 IQGAP1P46940 1657 aa36.88■■■■□ 3.49
LSM6-202ENST00000502781 ZNF326Q5BKZ1 582 aaKnown RBP36.87■■■■□ 3.49
LSM6-202ENST00000502781 PLEKHG1Q9ULL1 1385 aa36.85■■■■□ 3.49
LSM6-202ENST00000502781 NEXMIFQ5QGS0 1516 aa36.84■■■■□ 3.49
LSM6-202ENST00000502781 DHX57Q6P158 1386 aaKnown RBP36.84■■■■□ 3.49
LSM6-202ENST00000502781 RPGRIP1LQ68CZ1 1315 aa36.82■■■■□ 3.49
LSM6-202ENST00000502781 PPP1R15AO75807 674 aaPredicted RBP36.8■■■■□ 3.48
LSM6-202ENST00000502781 NUTM2DQ5VT03 806 aaPredicted RBP36.8■■■■□ 3.48
LSM6-202ENST00000502781 ZNF335Q9H4Z2 1342 aaPredicted RBP36.74■■■■□ 3.47
LSM6-202ENST00000502781 RGL3Q3MIN7 710 aa36.73■■■■□ 3.47
LSM6-202ENST00000502781 LTBP4Q8N2S1 1624 aa36.71■■■■□ 3.47
LSM6-202ENST00000502781 ADAMTS13Q76LX8 1427 aa36.7■■■■□ 3.47
LSM6-202ENST00000502781 VGFO15240 615 aaPredicted RBP36.7■■■■□ 3.47
LSM6-202ENST00000502781 SLC26A8Q96RN1 970 aa36.7■■■■□ 3.47
LSM6-202ENST00000502781 PPLO60437 1756 aa36.69■■■■□ 3.46
LSM6-202ENST00000502781 SETBP1Q9Y6X0 1596 aa36.68■■■■□ 3.46
LSM6-202ENST00000502781 TBX22Q9Y458 520 aa36.67■■■■□ 3.46
LSM6-202ENST00000502781 BCANQ96GW7 911 aa36.66■■■■□ 3.46
LSM6-202ENST00000502781 NRXN3Q9Y4C0 1643 aa36.64■■■■□ 3.46
LSM6-202ENST00000502781 IFT172Q9UG01 1749 aa36.63■■■■□ 3.45
LSM6-202ENST00000502781 SENP3Q9H4L4 574 aaPredicted RBP36.63■■■■□ 3.45
LSM6-202ENST00000502781 DIP2AQ14689 1571 aa36.62■■■■□ 3.45
LSM6-202ENST00000502781 ADGRF5Q8IZF2 1346 aa36.59■■■■□ 3.45
LSM6-202ENST00000502781 PIK3R4Q99570 1358 aa36.56■■■■□ 3.44
LSM6-202ENST00000502781 MYOM2P54296 1465 aa36.56■■■■□ 3.44
LSM6-202ENST00000502781 CPS1P31327 1500 aa36.55■■■■□ 3.44
LSM6-202ENST00000502781 KCNA6P17658 529 aa36.54■■■■□ 3.44
LSM6-202ENST00000502781 CERKQ8TCT0 537 aa36.54■■■■□ 3.44
LSM6-202ENST00000502781 SIN3AQ96ST3 1273 aa36.54■■■■□ 3.44
LSM6-202ENST00000502781 NRXN1Q9ULB1 1477 aa36.54■■■■□ 3.44
LSM6-202ENST00000502781 STRCP1A6NGW2 1772 aa36.53■■■■□ 3.44
LSM6-202ENST00000502781 STAC3Q96MF2 364 aa36.52■■■■□ 3.44
LSM6-202ENST00000502781 PIK3C2GO75747 1445 aa36.51■■■■□ 3.44
LSM6-202ENST00000502781 NWD1Q149M9 1564 aa36.5■■■■□ 3.43
LSM6-202ENST00000502781 METP08581 1390 aa36.48■■■■□ 3.43
LSM6-202ENST00000502781 ALKQ9UM73 1620 aa36.48■■■■□ 3.43
LSM6-202ENST00000502781 DCAF11Q8TEB1 546 aa36.47■■■■□ 3.43
LSM6-202ENST00000502781 CHD2O14647 1828 aaKnown RBP36.45■■■■□ 3.43
LSM6-202ENST00000502781 SETD1AO15047 1707 aaKnown RBP36.45■■■■□ 3.43
LSM6-202ENST00000502781 PTPRUQ92729 1446 aa36.45■■■■□ 3.43
LSM6-202ENST00000502781 IQSEC2Q5JU85 1478 aa36.45■■■■□ 3.42
LSM6-202ENST00000502781 LRRC7Q96NW7 1537 aa36.44■■■■□ 3.42
LSM6-202ENST00000502781 NKTRP30414 1462 aaKnown RBP36.43■■■■□ 3.42
LSM6-202ENST00000502781 NEUROD1Q13562 356 aa36.4■■■■□ 3.42
LSM6-202ENST00000502781 KDM2AQ9Y2K7 1162 aa36.4■■■■□ 3.42
LSM6-202ENST00000502781 C14orf93Q9H972 538 aaKnown RBP36.39■■■■□ 3.42
LSM6-202ENST00000502781 AMOTL2Q9Y2J4 779 aa36.38■■■■□ 3.41
LSM6-202ENST00000502781 L3MBTL2Q969R5 705 aa36.37■■■■□ 3.41
LSM6-202ENST00000502781 CLSPNQ9HAW4 1339 aa36.35■■■■□ 3.41
LSM6-202ENST00000502781 XRN1Q8IZH2 1706 aaKnown RBP36.35■■■■□ 3.41
LSM6-202ENST00000502781 PRAG1Q86YV5 1406 aa36.32■■■■□ 3.41
LSM6-202ENST00000502781 ASXL1Q8IXJ9 1541 aa36.31■■■■□ 3.4
LSM6-202ENST00000502781 CFAP70Q5T0N1 1121 aa36.31■■■■□ 3.4
LSM6-202ENST00000502781 PROSER2Q86WR7 435 aaPredicted RBP36.31■■■■□ 3.4
LSM6-202ENST00000502781 TMEM94Q12767 1356 aa36.31■■■■□ 3.4
LSM6-202ENST00000502781 LAMC1P11047 1609 aa36.29■■■■□ 3.4
LSM6-202ENST00000502781 NCOA3Q9Y6Q9 1424 aa36.26■■■■□ 3.39
LSM6-202ENST00000502781 TMEM132EQ6IEE7 984 aa36.25■■■■□ 3.39
LSM6-202ENST00000502781 XIRP1Q702N8 1843 aaKnown RBP36.25■■■■□ 3.39
LSM6-202ENST00000502781 PTCH1Q13635 1447 aa36.24■■■■□ 3.39
LSM6-202ENST00000502781 LRPPRCP42704 1394 aaKnown RBP36.23■■■■□ 3.39
LSM6-202ENST00000502781 RBM33Q96EV2 1170 aaKnown RBP36.22■■■■□ 3.39
LSM6-202ENST00000502781 TECPR2O15040 1411 aa36.21■■■■□ 3.39
LSM6-202ENST00000502781 ADGRB1O14514 1584 aa36.21■■■■□ 3.39
LSM6-202ENST00000502781 ABCC11Q96J66 1382 aa36.21■■■■□ 3.39
LSM6-202ENST00000502781 TONSLQ96HA7 1378 aa36.2■■■■□ 3.39
LSM6-202ENST00000502781 YTHDC2Q9H6S0 1430 aaKnown RBP36.2■■■■□ 3.39
LSM6-202ENST00000502781 ROBO2Q9HCK4 1378 aa36.19■■■■□ 3.38
LSM6-202ENST00000502781 FBXO41Q8TF61 875 aa36.18■■■■□ 3.38
LSM6-202ENST00000502781 CCER1Q8TC90 406 aaPredicted RBP36.17■■■■□ 3.38
LSM6-202ENST00000502781 KIAA1210Q9ULL0 1709 aa36.13■■■■□ 3.37
LSM6-202ENST00000502781 STK26Q9P289 416 aa36.13■■■■□ 3.37
LSM6-202ENST00000502781 KNDC1Q76NI1 1749 aa36.11■■■■□ 3.37
LSM6-202ENST00000502781 SIRT1Q96EB6 747 aa36.11■■■■□ 3.37
LSM6-202ENST00000502781 UBAP1LF5GYI3 381 aa36.1■■■■□ 3.37
LSM6-202ENST00000502781 MSH6P52701 1360 aa36.1■■■■□ 3.37
LSM6-202ENST00000502781 C19orf44Q9H6X5 657 aa36.08■■■■□ 3.37
LSM6-202ENST00000502781 FAM135BQ49AJ0 1406 aa36.07■■■■□ 3.37
LSM6-202ENST00000502781 TOM1O60784 492 aa36.07■■■■□ 3.36
LSM6-202ENST00000502781 TIMELESSQ9UNS1 1208 aa36.07■■■■□ 3.36
LSM6-202ENST00000502781 NBPF1Q3BBV0 1214 aa36.06■■■■□ 3.36
LSM6-202ENST00000502781 ADGRL3Q9HAR2 1447 aa36.06■■■■□ 3.36
LSM6-202ENST00000502781 NBPF8Q3BBV2 869 aa36.05■■■■□ 3.36
LSM6-202ENST00000502781 DLC1Q96QB1 1528 aa36.05■■■■□ 3.36
LSM6-202ENST00000502781 C14orf37Q86TY3 774 aa36.03■■■■□ 3.36
LSM6-202ENST00000502781 DCCP43146 1447 aa36.02■■■■□ 3.36
LSM6-202ENST00000502781 WAPLQ7Z5K2 1190 aa36.02■■■■□ 3.36
LSM6-202ENST00000502781 PLEKHH1Q9ULM0 1364 aa36.01■■■■□ 3.36
LSM6-202ENST00000502781 TRPM1Q7Z4N2 1603 aa36■■■■□ 3.35
LSM6-202ENST00000502781 TRAK1Q9UPV9 953 aa35.99■■■■□ 3.35
LSM6-202ENST00000502781 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.98■■■■□ 3.35
LSM6-202ENST00000502781 ILDR1Q86SU0 546 aaPredicted RBP35.97■■■■□ 3.35
LSM6-202ENST00000502781 NALCNQ8IZF0 1738 aa35.97■■■■□ 3.35
LSM6-202ENST00000502781 CADPS2Q86UW7 1296 aa35.96■■■■□ 3.35
LSM6-202ENST00000502781 PRAM1Q96QH2 718 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms