RNA–Protein interactions for RNA: ENST00000502415.5

POLR2J3-206, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-206ENST00000502415 MSH6P52701 1360 aa23.95■■□□□ 1.42
POLR2J3-206ENST00000502415 CHGAP10645 457 aaKnown RBP23.95■■□□□ 1.42
POLR2J3-206ENST00000502415 XIRP1Q702N8 1843 aaKnown RBP23.95■■□□□ 1.42
POLR2J3-206ENST00000502415 NKTRP30414 1462 aaKnown RBP23.94■■□□□ 1.42
POLR2J3-206ENST00000502415 TET3O43151 1660 aa23.94■■□□□ 1.42
POLR2J3-206ENST00000502415 PLEKHG1Q9ULL1 1385 aa23.91■■□□□ 1.42
POLR2J3-206ENST00000502415 RIMS2Q9UQ26 1411 aa23.9■■□□□ 1.42
POLR2J3-206ENST00000502415 RBM33Q96EV2 1170 aaKnown RBP23.89■■□□□ 1.41
POLR2J3-206ENST00000502415 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.41
POLR2J3-206ENST00000502415 C14orf37Q86TY3 774 aa23.88■■□□□ 1.41
POLR2J3-206ENST00000502415 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
POLR2J3-206ENST00000502415 NWD1Q149M9 1564 aa23.86■■□□□ 1.41
POLR2J3-206ENST00000502415 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
POLR2J3-206ENST00000502415 ZFYVE9O95405 1425 aa23.85■■□□□ 1.41
POLR2J3-206ENST00000502415 SLAIN2Q9P270 581 aa23.85■■□□□ 1.41
POLR2J3-206ENST00000502415 ROBO1Q9Y6N7 1651 aa23.84■■□□□ 1.41
POLR2J3-206ENST00000502415 UNC13BO14795 1591 aa23.84■■□□□ 1.41
POLR2J3-206ENST00000502415 ITGAEP38570 1179 aa23.83■■□□□ 1.41
POLR2J3-206ENST00000502415 TMEM131LA2VDJ0 1609 aa23.82■■□□□ 1.4
POLR2J3-206ENST00000502415 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
POLR2J3-206ENST00000502415 NUP155O75694 1391 aa23.81■■□□□ 1.4
POLR2J3-206ENST00000502415 NCOA3Q9Y6Q9 1424 aa23.81■■□□□ 1.4
POLR2J3-206ENST00000502415 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
POLR2J3-206ENST00000502415 ATF3P18847 181 aa23.78■■□□□ 1.4
POLR2J3-206ENST00000502415 PIK3R4Q99570 1358 aa23.78■■□□□ 1.4
POLR2J3-206ENST00000502415 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-206ENST00000502415 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
POLR2J3-206ENST00000502415 DIP2AQ14689 1571 aa23.77■■□□□ 1.4
POLR2J3-206ENST00000502415 IQGAP3Q86VI3 1631 aa23.77■■□□□ 1.4
POLR2J3-206ENST00000502415 E9PCH4 1651 aa23.76■■□□□ 1.39
POLR2J3-206ENST00000502415 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-206ENST00000502415 JCADQ9P266 1359 aa23.76■■□□□ 1.39
POLR2J3-206ENST00000502415 PHLPP1O60346 1717 aa23.74■■□□□ 1.39
POLR2J3-206ENST00000502415 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
POLR2J3-206ENST00000502415 ZNF326Q5BKZ1 582 aaKnown RBP23.71■■□□□ 1.39
POLR2J3-206ENST00000502415 TRPM2O94759 1503 aa23.7■■□□□ 1.38
POLR2J3-206ENST00000502415 AMOTL2Q9Y2J4 779 aa23.7■■□□□ 1.38
POLR2J3-206ENST00000502415 ADAMTS13Q76LX8 1427 aa23.69■■□□□ 1.38
POLR2J3-206ENST00000502415 MEX3CQ5U5Q3 659 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-206ENST00000502415 POTEAQ6S8J7 498 aa23.68■■□□□ 1.38
POLR2J3-206ENST00000502415 SPATA31A6Q5VVP1 1343 aa23.66■■□□□ 1.38
POLR2J3-206ENST00000502415 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
POLR2J3-206ENST00000502415 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.62■■□□□ 1.37
POLR2J3-206ENST00000502415 ZNF772Q68DY9 489 aaPredicted RBP23.61■■□□□ 1.37
POLR2J3-206ENST00000502415 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
POLR2J3-206ENST00000502415 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
POLR2J3-206ENST00000502415 DCCP43146 1447 aa23.59■■□□□ 1.37
POLR2J3-206ENST00000502415 AHDC1Q5TGY3 1603 aaPredicted RBP23.57■■□□□ 1.36
POLR2J3-206ENST00000502415 SETBP1Q9Y6X0 1596 aa23.56■■□□□ 1.36
POLR2J3-206ENST00000502415 BRINP3Q76B58 766 aa23.55■■□□□ 1.36
POLR2J3-206ENST00000502415 PTPRUQ92729 1446 aa23.55■■□□□ 1.36
POLR2J3-206ENST00000502415 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
POLR2J3-206ENST00000502415 NUTM2BA6NNL0 878 aaPredicted RBP23.51■■□□□ 1.35
POLR2J3-206ENST00000502415 NUTM2EB1AL46 878 aaPredicted RBP23.51■■□□□ 1.35
POLR2J3-206ENST00000502415 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
POLR2J3-206ENST00000502415 NUTM2AQ8IVF1 878 aaPredicted RBP23.51■■□□□ 1.35
POLR2J3-206ENST00000502415 SHPRHQ149N8 1683 aa23.51■■□□□ 1.35
POLR2J3-206ENST00000502415 LRRC59Q96AG4 307 aaKnown RBP23.5■■□□□ 1.35
POLR2J3-206ENST00000502415 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
POLR2J3-206ENST00000502415 KIF1BO60333 1816 aa23.49■■□□□ 1.35
POLR2J3-206ENST00000502415 METP08581 1390 aa23.49■■□□□ 1.35
POLR2J3-206ENST00000502415 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
POLR2J3-206ENST00000502415 RRBP1Q9P2E9 1410 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-206ENST00000502415 LRP6O75581 1613 aa23.47■■□□□ 1.35
POLR2J3-206ENST00000502415 RXRBP28702 533 aa23.46■■□□□ 1.35
POLR2J3-206ENST00000502415 ASXL1Q8IXJ9 1541 aa23.46■■□□□ 1.35
POLR2J3-206ENST00000502415 CLTCL1P53675 1640 aa23.45■■□□□ 1.34
POLR2J3-206ENST00000502415 MST1RQ04912 1400 aa23.45■■□□□ 1.34
POLR2J3-206ENST00000502415 NAIPQ13075 1403 aa23.45■■□□□ 1.34
POLR2J3-206ENST00000502415 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
POLR2J3-206ENST00000502415 RPGRIP1LQ68CZ1 1315 aa23.44■■□□□ 1.34
POLR2J3-206ENST00000502415 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
POLR2J3-206ENST00000502415 NEXMIFQ5QGS0 1516 aa23.43■■□□□ 1.34
POLR2J3-206ENST00000502415 SETD5Q9C0A6 1442 aa23.43■■□□□ 1.34
POLR2J3-206ENST00000502415 SETD1AO15047 1707 aaKnown RBP23.4■■□□□ 1.34
POLR2J3-206ENST00000502415 AFF2P51816 1311 aa23.38■■□□□ 1.33
POLR2J3-206ENST00000502415 NHSL1Q5SYE7 1610 aa23.38■■□□□ 1.33
POLR2J3-206ENST00000502415 HFM1A2PYH4 1435 aa23.37■■□□□ 1.33
POLR2J3-206ENST00000502415 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
POLR2J3-206ENST00000502415 PTCH1Q13635 1447 aa23.36■■□□□ 1.33
POLR2J3-206ENST00000502415 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.33
POLR2J3-206ENST00000502415 C1orf167Q5SNV9 1468 aa23.33■■□□□ 1.33
POLR2J3-206ENST00000502415 CDK12Q9NYV4 1490 aaPredicted RBP23.33■■□□□ 1.33
POLR2J3-206ENST00000502415 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
POLR2J3-206ENST00000502415 PNPLA6Q8IY17 1366 aa23.32■■□□□ 1.32
POLR2J3-206ENST00000502415 DDX17Q92841 729 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-206ENST00000502415 NGLY1Q96IV0 654 aa23.32■■□□□ 1.32
POLR2J3-206ENST00000502415 QTRT2Q9H974 415 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-206ENST00000502415 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
POLR2J3-206ENST00000502415 ROBO2Q9HCK4 1378 aa23.29■■□□□ 1.32
POLR2J3-206ENST00000502415 ADAMTS2O95450 1211 aa23.28■■□□□ 1.32
POLR2J3-206ENST00000502415 CCDC144AA2RUR9 1427 aa23.27■■□□□ 1.32
POLR2J3-206ENST00000502415 ORAI2Q96SN7 254 aa23.27■■□□□ 1.32
POLR2J3-206ENST00000502415 PRAG1Q86YV5 1406 aa23.25■■□□□ 1.31
POLR2J3-206ENST00000502415 SOS2Q07890 1332 aaPredicted RBP23.25■■□□□ 1.31
POLR2J3-206ENST00000502415 ACIN1Q9UKV3 1341 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-206ENST00000502415 PPLO60437 1756 aa23.24■■□□□ 1.31
POLR2J3-206ENST00000502415 RGL3Q3MIN7 710 aa23.24■■□□□ 1.31
POLR2J3-206ENST00000502415 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
POLR2J3-206ENST00000502415 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms