RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 KCNA6P17658 529 aa29.99■■■□□ 2.39
SFXN1-203ENST00000502393 BCANQ96GW7 911 aa29.97■■■□□ 2.39
SFXN1-203ENST00000502393 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
SFXN1-203ENST00000502393 MYO5BQ9ULV0 1848 aa29.96■■■□□ 2.39
SFXN1-203ENST00000502393 PLEKHG1Q9ULL1 1385 aa29.95■■■□□ 2.39
SFXN1-203ENST00000502393 CHGAP10645 457 aaKnown RBP29.95■■■□□ 2.39
SFXN1-203ENST00000502393 PPP1R15AO75807 674 aaPredicted RBP29.94■■■□□ 2.38
SFXN1-203ENST00000502393 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.94■■■□□ 2.38
SFXN1-203ENST00000502393 XIRP1Q702N8 1843 aaKnown RBP29.92■■■□□ 2.38
SFXN1-203ENST00000502393 ILDR2Q71H61 639 aa29.91■■■□□ 2.38
SFXN1-203ENST00000502393 TMEM94Q12767 1356 aa29.9■■■□□ 2.38
SFXN1-203ENST00000502393 NAIPQ13075 1403 aa29.88■■■□□ 2.37
SFXN1-203ENST00000502393 PROSER2Q86WR7 435 aaPredicted RBP29.88■■■□□ 2.37
SFXN1-203ENST00000502393 NWD1Q149M9 1564 aa29.88■■■□□ 2.37
SFXN1-203ENST00000502393 NKTRP30414 1462 aaKnown RBP29.87■■■□□ 2.37
SFXN1-203ENST00000502393 TBX22Q9Y458 520 aa29.86■■■□□ 2.37
SFXN1-203ENST00000502393 SENP3Q9H4L4 574 aaPredicted RBP29.85■■■□□ 2.37
SFXN1-203ENST00000502393 SPHKAPQ2M3C7 1700 aa29.81■■■□□ 2.36
SFXN1-203ENST00000502393 NUTM2DQ5VT03 806 aaPredicted RBP29.8■■■□□ 2.36
SFXN1-203ENST00000502393 HFM1A2PYH4 1435 aa29.79■■■□□ 2.36
SFXN1-203ENST00000502393 RBM33Q96EV2 1170 aaKnown RBP29.79■■■□□ 2.36
SFXN1-203ENST00000502393 CHD2O14647 1828 aaKnown RBP29.79■■■□□ 2.36
SFXN1-203ENST00000502393 FAM135BQ49AJ0 1406 aa29.78■■■□□ 2.36
SFXN1-203ENST00000502393 ADAMTS13Q76LX8 1427 aa29.78■■■□□ 2.36
SFXN1-203ENST00000502393 DIP2AQ14689 1571 aa29.77■■■□□ 2.36
SFXN1-203ENST00000502393 MED1Q15648 1581 aaPredicted RBP29.77■■■□□ 2.36
SFXN1-203ENST00000502393 MSH6P52701 1360 aa29.75■■■□□ 2.35
SFXN1-203ENST00000502393 PIK3R4Q99570 1358 aa29.75■■■□□ 2.35
SFXN1-203ENST00000502393 SOCS7O14512 581 aa29.72■■■□□ 2.35
SFXN1-203ENST00000502393 TRPM2O94759 1503 aa29.71■■■□□ 2.35
SFXN1-203ENST00000502393 ZNF326Q5BKZ1 582 aaKnown RBP29.71■■■□□ 2.35
SFXN1-203ENST00000502393 TRIM52Q96A61 297 aa29.71■■■□□ 2.35
SFXN1-203ENST00000502393 NCOA3Q9Y6Q9 1424 aa29.71■■■□□ 2.35
SFXN1-203ENST00000502393 CLTCL1P53675 1640 aa29.67■■■□□ 2.34
SFXN1-203ENST00000502393 SLAIN2Q9P270 581 aa29.65■■■□□ 2.34
SFXN1-203ENST00000502393 ROBO1Q9Y6N7 1651 aa29.64■■■□□ 2.34
SFXN1-203ENST00000502393 SLC4A1APQ9BWU0 796 aaKnown RBP29.64■■■□□ 2.34
SFXN1-203ENST00000502393 SETBP1Q9Y6X0 1596 aa29.64■■■□□ 2.33
SFXN1-203ENST00000502393 AMOTL2Q9Y2J4 779 aa29.63■■■□□ 2.33
SFXN1-203ENST00000502393 NRXN3Q9Y4C0 1643 aa29.6■■■□□ 2.33
SFXN1-203ENST00000502393 C14orf37Q86TY3 774 aa29.6■■■□□ 2.33
SFXN1-203ENST00000502393 PHF23Q9BUL5 403 aaPredicted RBP29.6■■■□□ 2.33
SFXN1-203ENST00000502393 PTPRUQ92729 1446 aa29.6■■■□□ 2.33
SFXN1-203ENST00000502393 KIF1BO60333 1816 aa29.59■■■□□ 2.33
SFXN1-203ENST00000502393 C19orf44Q9H6X5 657 aa29.59■■■□□ 2.33
SFXN1-203ENST00000502393 NEXMIFQ5QGS0 1516 aa29.59■■■□□ 2.33
SFXN1-203ENST00000502393 CADPS2Q86UW7 1296 aa29.56■■■□□ 2.32
SFXN1-203ENST00000502393 ATF3P18847 181 aa29.53■■■□□ 2.32
SFXN1-203ENST00000502393 METP08581 1390 aa29.52■■■□□ 2.32
SFXN1-203ENST00000502393 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.52■■■□□ 2.32
SFXN1-203ENST00000502393 XRN1Q8IZH2 1706 aaKnown RBP29.51■■■□□ 2.32
SFXN1-203ENST00000502393 VGFO15240 615 aaPredicted RBP29.51■■■□□ 2.31
SFXN1-203ENST00000502393 RPGRIP1LQ68CZ1 1315 aa29.5■■■□□ 2.31
SFXN1-203ENST00000502393 PHLPP1O60346 1717 aa29.46■■■□□ 2.31
SFXN1-203ENST00000502393 DCCP43146 1447 aa29.45■■■□□ 2.31
SFXN1-203ENST00000502393 FOXD1Q16676 465 aa29.45■■■□□ 2.31
SFXN1-203ENST00000502393 ACIN1Q9UKV3 1341 aaKnown RBP29.45■■■□□ 2.3
SFXN1-203ENST00000502393 MPHOSPH9Q99550 1183 aa29.44■■■□□ 2.3
SFXN1-203ENST00000502393 JCADQ9P266 1359 aa29.41■■■□□ 2.3
SFXN1-203ENST00000502393 CCDC144AA2RUR9 1427 aa29.4■■■□□ 2.3
SFXN1-203ENST00000502393 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
SFXN1-203ENST00000502393 COL16A1Q07092 1604 aaPredicted RBP29.38■■■□□ 2.29
SFXN1-203ENST00000502393 PPLO60437 1756 aa29.37■■■□□ 2.29
SFXN1-203ENST00000502393 AHDC1Q5TGY3 1603 aaPredicted RBP29.37■■■□□ 2.29
SFXN1-203ENST00000502393 BRINP3Q76B58 766 aa29.36■■■□□ 2.29
SFXN1-203ENST00000502393 SETD5Q9C0A6 1442 aa29.36■■■□□ 2.29
SFXN1-203ENST00000502393 ADGRL3Q9HAR2 1447 aa29.36■■■□□ 2.29
SFXN1-203ENST00000502393 SETD1AO15047 1707 aaKnown RBP29.35■■■□□ 2.29
SFXN1-203ENST00000502393 PTCH1Q13635 1447 aa29.34■■■□□ 2.29
SFXN1-203ENST00000502393 MST1RQ04912 1400 aa29.33■■■□□ 2.29
SFXN1-203ENST00000502393 SPATA31E1Q6ZUB1 1445 aa29.31■■■□□ 2.28
SFXN1-203ENST00000502393 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
SFXN1-203ENST00000502393 RGL3Q3MIN7 710 aa29.3■■■□□ 2.28
SFXN1-203ENST00000502393 NALCNQ8IZF0 1738 aa29.28■■■□□ 2.28
SFXN1-203ENST00000502393 ANKRD30BQ9BXX2 1392 aa29.28■■■□□ 2.28
SFXN1-203ENST00000502393 ROBO2Q9HCK4 1378 aa29.28■■■□□ 2.28
SFXN1-203ENST00000502393 SPATA31A6Q5VVP1 1343 aa29.28■■■□□ 2.28
SFXN1-203ENST00000502393 ASXL1Q8IXJ9 1541 aa29.28■■■□□ 2.28
SFXN1-203ENST00000502393 ADGRF5Q8IZF2 1346 aa29.26■■■□□ 2.27
SFXN1-203ENST00000502393 RAB3GAP2Q9H2M9 1393 aa29.23■■■□□ 2.27
SFXN1-203ENST00000502393 SHPRHQ149N8 1683 aa29.22■■■□□ 2.27
SFXN1-203ENST00000502393 POTEAQ6S8J7 498 aa29.22■■■□□ 2.27
SFXN1-203ENST00000502393 IFT172Q9UG01 1749 aa29.21■■■□□ 2.27
SFXN1-203ENST00000502393 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.26
SFXN1-203ENST00000502393 C1orf167Q5SNV9 1468 aa29.19■■■□□ 2.26
SFXN1-203ENST00000502393 LRP6O75581 1613 aa29.18■■■□□ 2.26
SFXN1-203ENST00000502393 LRRC59Q96AG4 307 aaKnown RBP29.17■■■□□ 2.26
SFXN1-203ENST00000502393 PIK3C2GO75747 1445 aa29.16■■■□□ 2.26
SFXN1-203ENST00000502393 MEX3CQ5U5Q3 659 aaKnown RBP29.15■■■□□ 2.26
SFXN1-203ENST00000502393 TECPR2O15040 1411 aa29.13■■■□□ 2.25
SFXN1-203ENST00000502393 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
SFXN1-203ENST00000502393 DDX17Q92841 729 aaKnown RBP29.12■■■□□ 2.25
SFXN1-203ENST00000502393 ABCC11Q96J66 1382 aa29.12■■■□□ 2.25
SFXN1-203ENST00000502393 STK26Q9P289 416 aa29.11■■■□□ 2.25
SFXN1-203ENST00000502393 TMEM132EQ6IEE7 984 aa29.1■■■□□ 2.25
SFXN1-203ENST00000502393 ORAI2Q96SN7 254 aa29.1■■■□□ 2.25
SFXN1-203ENST00000502393 HRCP23327 699 aa29.09■■■□□ 2.25
SFXN1-203ENST00000502393 LAMC1P11047 1609 aa29.09■■■□□ 2.25
SFXN1-203ENST00000502393 NUTM2BA6NNL0 878 aaPredicted RBP29.08■■■□□ 2.25
SFXN1-203ENST00000502393 NUTM2EB1AL46 878 aaPredicted RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms