RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ZMYND10O75800 440 aa6.03□□□□□ -1.44
SMAD1-203ENST00000502342 MAP2K5Q13163 448 aa6.03□□□□□ -1.44
SMAD1-203ENST00000502342 BARGINQ6ZT62 677 aa6.03□□□□□ -1.44
SMAD1-203ENST00000502342 TSR3Q9UJK0 312 aaKnown RBP6.03□□□□□ -1.44
SMAD1-203ENST00000502342 CCDC102AQ96A19 550 aa6.02□□□□□ -1.45
SMAD1-203ENST00000502342 TMEM134Q9H6X4 195 aa6.02□□□□□ -1.45
SMAD1-203ENST00000502342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.01□□□□□ -1.45
SMAD1-203ENST00000502342 SLF2Q8IX21 1173 aa6.01□□□□□ -1.45
SMAD1-203ENST00000502342 DDX11L8A8MPP1 907 aa6□□□□□ -1.45
SMAD1-203ENST00000502342 MDM2Q00987 491 aaPredicted RBP6□□□□□ -1.45
SMAD1-203ENST00000502342 SLC24A3Q9HC58 644 aa6□□□□□ -1.45
SMAD1-203ENST00000502342 SLC10A3P09131 477 aa5.99□□□□□ -1.45
SMAD1-203ENST00000502342 SLC4A3P48751 1232 aa5.99□□□□□ -1.45
SMAD1-203ENST00000502342 DAXXQ9UER7 740 aaPredicted RBP5.99□□□□□ -1.45
SMAD1-203ENST00000502342 APLP1P51693 650 aa5.98□□□□□ -1.45
SMAD1-203ENST00000502342 RDH13Q8NBN7 331 aa5.98□□□□□ -1.45
SMAD1-203ENST00000502342 PLA2G2EQ9NZK7 142 aa5.97□□□□□ -1.45
SMAD1-203ENST00000502342 AK7Q96M32 723 aa5.96□□□□□ -1.46
SMAD1-203ENST00000502342 REPIN1Q9BWE0 567 aaKnown RBP5.96□□□□□ -1.46
SMAD1-203ENST00000502342 TRIM66O15016 1216 aa5.95□□□□□ -1.46
SMAD1-203ENST00000502342 COPS2P61201 443 aa5.95□□□□□ -1.46
SMAD1-203ENST00000502342 RSPH4AQ5TD94 716 aa5.95□□□□□ -1.46
SMAD1-203ENST00000502342 CFHP08603 1231 aa5.94□□□□□ -1.46
SMAD1-203ENST00000502342 TPRNQ4KMQ1 711 aa5.94□□□□□ -1.46
SMAD1-203ENST00000502342 ZNF516Q92618 1163 aa5.94□□□□□ -1.46
SMAD1-203ENST00000502342 TTLL12Q14166 644 aaPredicted RBP5.93□□□□□ -1.46
SMAD1-203ENST00000502342 PUS10Q3MIT2 529 aaKnown RBP5.93□□□□□ -1.46
SMAD1-203ENST00000502342 KMT5BQ4FZB7 885 aa5.93□□□□□ -1.46
SMAD1-203ENST00000502342 NYAP1Q6ZVC0 841 aa5.93□□□□□ -1.46
SMAD1-203ENST00000502342 MTRQ99707 1265 aa5.93□□□□□ -1.46
SMAD1-203ENST00000502342 SSTR3P32745 418 aaPredicted RBP5.92□□□□□ -1.46
SMAD1-203ENST00000502342 CLCN1P35523 988 aa5.92□□□□□ -1.46
SMAD1-203ENST00000502342 KCNC4Q03721 635 aa5.92□□□□□ -1.46
SMAD1-203ENST00000502342 TJAP1Q5JTD0 557 aa5.92□□□□□ -1.46
SMAD1-203ENST00000502342 NECTIN2Q92692 538 aa5.92□□□□□ -1.46
SMAD1-203ENST00000502342 GPCPD1Q9NPB8 672 aa5.92□□□□□ -1.46
SMAD1-203ENST00000502342 PCDHB3Q9Y5E6 796 aa5.92□□□□□ -1.46
SMAD1-203ENST00000502342 ACTN4O43707 911 aaKnown RBP5.91□□□□□ -1.46
SMAD1-203ENST00000502342 PRKCSHP14314 528 aaPredicted RBP5.91□□□□□ -1.46
SMAD1-203ENST00000502342 GCGRP47871 477 aa5.91□□□□□ -1.46
SMAD1-203ENST00000502342 PDE4DQ08499 809 aa5.91□□□□□ -1.46
SMAD1-203ENST00000502342 BLOC1S3Q6QNY0 202 aa5.91□□□□□ -1.46
SMAD1-203ENST00000502342 SULF1Q8IWU6 871 aa5.91□□□□□ -1.46
SMAD1-203ENST00000502342 NKX2-3Q8TAU0 364 aa5.91□□□□□ -1.46
SMAD1-203ENST00000502342 TMUB1Q9BVT8 246 aa5.91□□□□□ -1.46
SMAD1-203ENST00000502342 FUT2Q10981 343 aa5.9□□□□□ -1.46
SMAD1-203ENST00000502342 IL21Q9HBE4 155 aa5.9□□□□□ -1.46
SMAD1-203ENST00000502342 FAM217BQ9NTX9 383 aaPredicted RBP5.9□□□□□ -1.46
SMAD1-203ENST00000502342 CD46P15529 392 aa5.89□□□□□ -1.47
SMAD1-203ENST00000502342 AMHR2Q16671 573 aa5.89□□□□□ -1.47
SMAD1-203ENST00000502342 GIGYF2Q6Y7W6 1299 aaKnown RBP5.89□□□□□ -1.47
SMAD1-203ENST00000502342 PRR14Q9BWN1 585 aa5.89□□□□□ -1.47
SMAD1-203ENST00000502342 ITGBL1O95965 494 aaPredicted RBP5.88□□□□□ -1.47
SMAD1-203ENST00000502342 SCUBE3Q8IX30 993 aa5.88□□□□□ -1.47
SMAD1-203ENST00000502342 PARP9Q8IXQ6 854 aa5.88□□□□□ -1.47
SMAD1-203ENST00000502342 KDM4AO75164 1064 aa5.87□□□□□ -1.47
SMAD1-203ENST00000502342 ZPR1O75312 459 aa5.87□□□□□ -1.47
SMAD1-203ENST00000502342 MS4A1P11836 297 aa5.87□□□□□ -1.47
SMAD1-203ENST00000502342 ATP6V1AP38606 617 aa5.87□□□□□ -1.47
SMAD1-203ENST00000502342 HLA-CQ95604 372 aa5.87□□□□□ -1.47
SMAD1-203ENST00000502342 BEGAINQ9BUH8 593 aa5.87□□□□□ -1.47
SMAD1-203ENST00000502342 TLL1O43897 1013 aa5.86□□□□□ -1.47
SMAD1-203ENST00000502342 NUTM1Q86Y26 1132 aa5.86□□□□□ -1.47
SMAD1-203ENST00000502342 GPBP1L1Q9HC44 474 aaPredicted RBP5.86□□□□□ -1.47
SMAD1-203ENST00000502342 SLC27A5Q9Y2P5 690 aa5.86□□□□□ -1.47
SMAD1-203ENST00000502342 NR1I2O75469 434 aa5.85□□□□□ -1.47
SMAD1-203ENST00000502342 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
SMAD1-203ENST00000502342 MORN1Q5T089 497 aa5.85□□□□□ -1.47
SMAD1-203ENST00000502342 NDUFV2P19404 249 aa5.84□□□□□ -1.47
SMAD1-203ENST00000502342 PPP1R18Q6NYC8 613 aa5.84□□□□□ -1.47
SMAD1-203ENST00000502342 PPEF1O14829 653 aaPredicted RBP5.83□□□□□ -1.48
SMAD1-203ENST00000502342 GRIPAP1Q4V328 841 aa5.83□□□□□ -1.48
SMAD1-203ENST00000502342 IFFO2Q5TF58 517 aa5.83□□□□□ -1.48
SMAD1-203ENST00000502342 SPIRE2Q8WWL2 714 aa5.83□□□□□ -1.48
SMAD1-203ENST00000502342 SYMPKQ92797 1274 aaKnown RBP5.83□□□□□ -1.48
SMAD1-203ENST00000502342 A0A0G2JS52 829 aa5.82□□□□□ -1.48
SMAD1-203ENST00000502342 SPSB2Q99619 263 aa5.82□□□□□ -1.48
SMAD1-203ENST00000502342 MOXD2PA6NHM9 499 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 HOXA2O43364 376 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 S1PR4O95977 384 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 NEUROD2Q15784 382 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 BRICD5Q6PL45 260 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 RNF19BQ6ZMZ0 732 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 TBC1D2Q9BYX2 928 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 KDM4CQ9H3R0 1056 aa5.81□□□□□ -1.48
SMAD1-203ENST00000502342 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.81□□□□□ -1.48
SMAD1-203ENST00000502342 FMNL1O95466 1100 aaPredicted RBP5.8□□□□□ -1.48
SMAD1-203ENST00000502342 FDX1P10109 184 aa5.8□□□□□ -1.48
SMAD1-203ENST00000502342 USP46P62068 366 aa5.8□□□□□ -1.48
SMAD1-203ENST00000502342 FAM160A2Q8N612 972 aaPredicted RBP5.8□□□□□ -1.48
SMAD1-203ENST00000502342 THAP11Q96EK4 314 aa5.8□□□□□ -1.48
SMAD1-203ENST00000502342 FAM117AQ9C073 453 aa5.8□□□□□ -1.48
SMAD1-203ENST00000502342 ATP1B4Q9UN42 357 aaPredicted RBP5.8□□□□□ -1.48
SMAD1-203ENST00000502342 ADH1BP00325 375 aa5.79□□□□□ -1.48
SMAD1-203ENST00000502342 CSPP1Q1MSJ5 1256 aa5.79□□□□□ -1.48
SMAD1-203ENST00000502342 SLC6A16Q9GZN6 736 aa5.79□□□□□ -1.48
SMAD1-203ENST00000502342 POLR3EQ9NVU0 708 aa5.79□□□□□ -1.48
SMAD1-203ENST00000502342 PCDHGC3Q9UN70 934 aa5.79□□□□□ -1.48
SMAD1-203ENST00000502342 PCDHB15Q9Y5E8 787 aa5.79□□□□□ -1.48
SMAD1-203ENST00000502342 C6orf229H3BNL8 230 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms