RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 ROCK1Q13464 1354 aa11.05□□□□□ -0.64
SH3RF1-202ENST00000502315 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
SH3RF1-202ENST00000502315 CFAP65Q6ZU64 1925 aaKnown RBP11.04□□□□□ -0.64
SH3RF1-202ENST00000502315 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
SH3RF1-202ENST00000502315 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
SH3RF1-202ENST00000502315 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
SH3RF1-202ENST00000502315 PLEKHG1Q9ULL1 1385 aa11.03□□□□□ -0.64
SH3RF1-202ENST00000502315 ADGRB3O60242 1522 aa11.03□□□□□ -0.64
SH3RF1-202ENST00000502315 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
SH3RF1-202ENST00000502315 PROSER2Q86WR7 435 aaPredicted RBP11.02□□□□□ -0.65
SH3RF1-202ENST00000502315 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
SH3RF1-202ENST00000502315 MSH6P52701 1360 aa11.01□□□□□ -0.65
SH3RF1-202ENST00000502315 ZFYVE9O95405 1425 aa11.01□□□□□ -0.65
SH3RF1-202ENST00000502315 NWD1Q149M9 1564 aa11□□□□□ -0.65
SH3RF1-202ENST00000502315 SLC26A8Q96RN1 970 aa10.99□□□□□ -0.65
SH3RF1-202ENST00000502315 SLAIN2Q9P270 581 aa10.99□□□□□ -0.65
SH3RF1-202ENST00000502315 XIRP1Q702N8 1843 aaKnown RBP10.98□□□□□ -0.65
SH3RF1-202ENST00000502315 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 PPP1R15AO75807 674 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 BCANQ96GW7 911 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 RIMS2Q9UQ26 1411 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 DIP2AQ14689 1571 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 GCC2Q8IWJ2 1684 aa10.97□□□□□ -0.65
SH3RF1-202ENST00000502315 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.65
SH3RF1-202ENST00000502315 UNC13BO14795 1591 aa10.96□□□□□ -0.65
SH3RF1-202ENST00000502315 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
SH3RF1-202ENST00000502315 JCADQ9P266 1359 aa10.94□□□□□ -0.66
SH3RF1-202ENST00000502315 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
SH3RF1-202ENST00000502315 RGS17Q9UGC6 210 aaPredicted RBP10.94□□□□□ -0.66
SH3RF1-202ENST00000502315 IQGAP3Q86VI3 1631 aa10.93□□□□□ -0.66
SH3RF1-202ENST00000502315 DCCP43146 1447 aa10.92□□□□□ -0.66
SH3RF1-202ENST00000502315 NUP155O75694 1391 aa10.92□□□□□ -0.66
SH3RF1-202ENST00000502315 ATF3P18847 181 aa10.92□□□□□ -0.66
SH3RF1-202ENST00000502315 RNF39Q9H2S5 420 aa10.92□□□□□ -0.66
SH3RF1-202ENST00000502315 ADAMTS13Q76LX8 1427 aa10.92□□□□□ -0.66
SH3RF1-202ENST00000502315 ROBO1Q9Y6N7 1651 aa10.92□□□□□ -0.66
SH3RF1-202ENST00000502315 TRPM2O94759 1503 aa10.89□□□□□ -0.67
SH3RF1-202ENST00000502315 E9PCH4 1651 aa10.89□□□□□ -0.67
SH3RF1-202ENST00000502315 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
SH3RF1-202ENST00000502315 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-202ENST00000502315 AMOTL2Q9Y2J4 779 aa10.89□□□□□ -0.67
SH3RF1-202ENST00000502315 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
SH3RF1-202ENST00000502315 HOXD11P31277 338 aaPredicted RBP10.88□□□□□ -0.67
SH3RF1-202ENST00000502315 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
SH3RF1-202ENST00000502315 AHDC1Q5TGY3 1603 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-202ENST00000502315 SETBP1Q9Y6X0 1596 aa10.86□□□□□ -0.67
SH3RF1-202ENST00000502315 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
SH3RF1-202ENST00000502315 POTEAQ6S8J7 498 aa10.86□□□□□ -0.67
SH3RF1-202ENST00000502315 PHLPP1O60346 1717 aa10.86□□□□□ -0.67
SH3RF1-202ENST00000502315 MYO5BQ9ULV0 1848 aa10.86□□□□□ -0.67
SH3RF1-202ENST00000502315 RPGRIP1LQ68CZ1 1315 aa10.85□□□□□ -0.67
SH3RF1-202ENST00000502315 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
SH3RF1-202ENST00000502315 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
SH3RF1-202ENST00000502315 COL16A1Q07092 1604 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-202ENST00000502315 LRRC59Q96AG4 307 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-202ENST00000502315 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-202ENST00000502315 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
SH3RF1-202ENST00000502315 RRBP1Q9P2E9 1410 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-202ENST00000502315 BRINP3Q76B58 766 aa10.83□□□□□ -0.68
SH3RF1-202ENST00000502315 PRAG1Q86YV5 1406 aa10.83□□□□□ -0.68
SH3RF1-202ENST00000502315 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-202ENST00000502315 PTPRUQ92729 1446 aa10.82□□□□□ -0.68
SH3RF1-202ENST00000502315 SHPRHQ149N8 1683 aa10.82□□□□□ -0.68
SH3RF1-202ENST00000502315 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
SH3RF1-202ENST00000502315 SPHKAPQ2M3C7 1700 aa10.81□□□□□ -0.68
SH3RF1-202ENST00000502315 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
SH3RF1-202ENST00000502315 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-202ENST00000502315 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
SH3RF1-202ENST00000502315 MST1RQ04912 1400 aa10.79□□□□□ -0.68
SH3RF1-202ENST00000502315 NAIPQ13075 1403 aa10.79□□□□□ -0.68
SH3RF1-202ENST00000502315 PTCH1Q13635 1447 aa10.79□□□□□ -0.68
SH3RF1-202ENST00000502315 RXRBP28702 533 aa10.79□□□□□ -0.68
SH3RF1-202ENST00000502315 ITGAEP38570 1179 aa10.79□□□□□ -0.68
SH3RF1-202ENST00000502315 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
SH3RF1-202ENST00000502315 METP08581 1390 aa10.78□□□□□ -0.68
SH3RF1-202ENST00000502315 HFM1A2PYH4 1435 aa10.78□□□□□ -0.68
SH3RF1-202ENST00000502315 NRXN3Q9Y4C0 1643 aa10.78□□□□□ -0.68
SH3RF1-202ENST00000502315 NEXMIFQ5QGS0 1516 aa10.78□□□□□ -0.68
SH3RF1-202ENST00000502315 ASXL1Q8IXJ9 1541 aa10.77□□□□□ -0.69
SH3RF1-202ENST00000502315 KIF1BO60333 1816 aa10.75□□□□□ -0.69
SH3RF1-202ENST00000502315 SLC4A1APQ9BWU0 796 aaKnown RBP10.75□□□□□ -0.69
SH3RF1-202ENST00000502315 LRP6O75581 1613 aa10.75□□□□□ -0.69
SH3RF1-202ENST00000502315 LAMC1P11047 1609 aa10.75□□□□□ -0.69
SH3RF1-202ENST00000502315 NHSL1Q5SYE7 1610 aa10.75□□□□□ -0.69
SH3RF1-202ENST00000502315 SOS2Q07890 1332 aaPredicted RBP10.75□□□□□ -0.69
SH3RF1-202ENST00000502315 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
SH3RF1-202ENST00000502315 NGLY1Q96IV0 654 aa10.74□□□□□ -0.69
SH3RF1-202ENST00000502315 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
SH3RF1-202ENST00000502315 CLTCL1P53675 1640 aa10.73□□□□□ -0.69
SH3RF1-202ENST00000502315 RBM6P78332 1123 aaKnown RBP10.73□□□□□ -0.69
SH3RF1-202ENST00000502315 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
SH3RF1-202ENST00000502315 LRPPRCP42704 1394 aaKnown RBP10.73□□□□□ -0.69
SH3RF1-202ENST00000502315 ANKRD30BQ9BXX2 1392 aa10.73□□□□□ -0.69
SH3RF1-202ENST00000502315 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
SH3RF1-202ENST00000502315 PNPLA6Q8IY17 1366 aa10.72□□□□□ -0.69
SH3RF1-202ENST00000502315 AFF2P51816 1311 aa10.71□□□□□ -0.69
SH3RF1-202ENST00000502315 NPHP3Q7Z494 1330 aa10.71□□□□□ -0.69
SH3RF1-202ENST00000502315 FNBP4Q8N3X1 1017 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms