RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 ADGRL2O95490 1459 aa22.88■■□□□ 1.25
SEC61A1-207ENST00000498837 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
SEC61A1-207ENST00000498837 BCANQ96GW7 911 aa22.86■■□□□ 1.25
SEC61A1-207ENST00000498837 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
SEC61A1-207ENST00000498837 POTEAQ6S8J7 498 aa22.85■■□□□ 1.25
SEC61A1-207ENST00000498837 PHLPP1O60346 1717 aa22.85■■□□□ 1.25
SEC61A1-207ENST00000498837 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
SEC61A1-207ENST00000498837 ZFYVE9O95405 1425 aa22.82■■□□□ 1.24
SEC61A1-207ENST00000498837 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
SEC61A1-207ENST00000498837 RPRD2Q5VT52 1461 aaKnown RBP22.82■■□□□ 1.24
SEC61A1-207ENST00000498837 ANKRD50Q9ULJ7 1429 aa22.82■■□□□ 1.24
SEC61A1-207ENST00000498837 MSH6P52701 1360 aa22.81■■□□□ 1.24
SEC61A1-207ENST00000498837 PLEKHG1Q9ULL1 1385 aa22.79■■□□□ 1.24
SEC61A1-207ENST00000498837 SLAIN2Q9P270 581 aa22.79■■□□□ 1.24
SEC61A1-207ENST00000498837 RIMS2Q9UQ26 1411 aa22.79■■□□□ 1.24
SEC61A1-207ENST00000498837 E9PCH4 1651 aa22.77■■□□□ 1.24
SEC61A1-207ENST00000498837 UNC13BO14795 1591 aa22.76■■□□□ 1.23
SEC61A1-207ENST00000498837 SETD1AO15047 1707 aaKnown RBP22.75■■□□□ 1.23
SEC61A1-207ENST00000498837 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
SEC61A1-207ENST00000498837 COL16A1Q07092 1604 aaPredicted RBP22.73■■□□□ 1.23
SEC61A1-207ENST00000498837 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
SEC61A1-207ENST00000498837 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.72■■□□□ 1.23
SEC61A1-207ENST00000498837 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
SEC61A1-207ENST00000498837 NUTM2DQ5VT03 806 aaPredicted RBP22.72■■□□□ 1.23
SEC61A1-207ENST00000498837 TBX22Q9Y458 520 aa22.72■■□□□ 1.23
SEC61A1-207ENST00000498837 JCADQ9P266 1359 aa22.71■■□□□ 1.23
SEC61A1-207ENST00000498837 ADAMTS13Q76LX8 1427 aa22.69■■□□□ 1.22
SEC61A1-207ENST00000498837 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.68■■□□□ 1.22
SEC61A1-207ENST00000498837 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
SEC61A1-207ENST00000498837 NCOA3Q9Y6Q9 1424 aa22.66■■□□□ 1.22
SEC61A1-207ENST00000498837 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
SEC61A1-207ENST00000498837 DIP2AQ14689 1571 aa22.66■■□□□ 1.22
SEC61A1-207ENST00000498837 LRP6O75581 1613 aa22.63■■□□□ 1.21
SEC61A1-207ENST00000498837 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
SEC61A1-207ENST00000498837 AHDC1Q5TGY3 1603 aaPredicted RBP22.61■■□□□ 1.21
SEC61A1-207ENST00000498837 C19orf44Q9H6X5 657 aa22.61■■□□□ 1.21
SEC61A1-207ENST00000498837 PIK3R4Q99570 1358 aa22.61■■□□□ 1.21
SEC61A1-207ENST00000498837 PTPRUQ92729 1446 aa22.6■■□□□ 1.21
SEC61A1-207ENST00000498837 CADPS2Q86UW7 1296 aa22.6■■□□□ 1.21
SEC61A1-207ENST00000498837 TRPM2O94759 1503 aa22.6■■□□□ 1.21
SEC61A1-207ENST00000498837 ROCK1Q13464 1354 aa22.6■■□□□ 1.21
SEC61A1-207ENST00000498837 ATF3P18847 181 aa22.59■■□□□ 1.21
SEC61A1-207ENST00000498837 AMOTL2Q9Y2J4 779 aa22.58■■□□□ 1.21
SEC61A1-207ENST00000498837 NUP155O75694 1391 aa22.58■■□□□ 1.21
SEC61A1-207ENST00000498837 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
SEC61A1-207ENST00000498837 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
SEC61A1-207ENST00000498837 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
SEC61A1-207ENST00000498837 MEX3CQ5U5Q3 659 aaKnown RBP22.56■■□□□ 1.2
SEC61A1-207ENST00000498837 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
SEC61A1-207ENST00000498837 ITGAEP38570 1179 aa22.54■■□□□ 1.2
SEC61A1-207ENST00000498837 BRINP3Q76B58 766 aa22.53■■□□□ 1.2
SEC61A1-207ENST00000498837 ZNF772Q68DY9 489 aaPredicted RBP22.51■■□□□ 1.19
SEC61A1-207ENST00000498837 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
SEC61A1-207ENST00000498837 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
SEC61A1-207ENST00000498837 NHSL1Q5SYE7 1610 aa22.49■■□□□ 1.19
SEC61A1-207ENST00000498837 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
SEC61A1-207ENST00000498837 NUTM2BA6NNL0 878 aaPredicted RBP22.48■■□□□ 1.19
SEC61A1-207ENST00000498837 NUTM2EB1AL46 878 aaPredicted RBP22.48■■□□□ 1.19
SEC61A1-207ENST00000498837 NUTM2AQ8IVF1 878 aaPredicted RBP22.48■■□□□ 1.19
SEC61A1-207ENST00000498837 DCCP43146 1447 aa22.48■■□□□ 1.19
SEC61A1-207ENST00000498837 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
SEC61A1-207ENST00000498837 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.19
SEC61A1-207ENST00000498837 MST1RQ04912 1400 aa22.46■■□□□ 1.19
SEC61A1-207ENST00000498837 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
SEC61A1-207ENST00000498837 METP08581 1390 aa22.45■■□□□ 1.18
SEC61A1-207ENST00000498837 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.18
SEC61A1-207ENST00000498837 KIF1BO60333 1816 aa22.45■■□□□ 1.18
SEC61A1-207ENST00000498837 CLTCL1P53675 1640 aa22.43■■□□□ 1.18
SEC61A1-207ENST00000498837 RXRBP28702 533 aa22.43■■□□□ 1.18
SEC61A1-207ENST00000498837 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
SEC61A1-207ENST00000498837 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
SEC61A1-207ENST00000498837 DDX17Q92841 729 aaKnown RBP22.41■■□□□ 1.18
SEC61A1-207ENST00000498837 AFF2P51816 1311 aa22.4■■□□□ 1.18
SEC61A1-207ENST00000498837 ADGRL3Q9HAR2 1447 aa22.39■■□□□ 1.17
SEC61A1-207ENST00000498837 LRRC59Q96AG4 307 aaKnown RBP22.38■■□□□ 1.17
SEC61A1-207ENST00000498837 CDK12Q9NYV4 1490 aaPredicted RBP22.36■■□□□ 1.17
SEC61A1-207ENST00000498837 PNPLA6Q8IY17 1366 aa22.34■■□□□ 1.17
SEC61A1-207ENST00000498837 C8orf37Q96NL8 207 aa22.33■■□□□ 1.17
SEC61A1-207ENST00000498837 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
SEC61A1-207ENST00000498837 LAMC1P11047 1609 aa22.31■■□□□ 1.16
SEC61A1-207ENST00000498837 C1orf167Q5SNV9 1468 aa22.3■■□□□ 1.16
SEC61A1-207ENST00000498837 RGS12O14924 1447 aa22.29■■□□□ 1.16
SEC61A1-207ENST00000498837 PPLO60437 1756 aa22.27■■□□□ 1.16
SEC61A1-207ENST00000498837 RBM6P78332 1123 aaKnown RBP22.27■■□□□ 1.16
SEC61A1-207ENST00000498837 NAIPQ13075 1403 aa22.27■■□□□ 1.16
SEC61A1-207ENST00000498837 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
SEC61A1-207ENST00000498837 ADAMTS2O95450 1211 aa22.26■■□□□ 1.15
SEC61A1-207ENST00000498837 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
SEC61A1-207ENST00000498837 PTCH1Q13635 1447 aa22.25■■□□□ 1.15
SEC61A1-207ENST00000498837 NGLY1Q96IV0 654 aa22.25■■□□□ 1.15
SEC61A1-207ENST00000498837 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
SEC61A1-207ENST00000498837 SOS2Q07890 1332 aaPredicted RBP22.22■■□□□ 1.15
SEC61A1-207ENST00000498837 RRBP1Q9P2E9 1410 aaKnown RBP22.22■■□□□ 1.15
SEC61A1-207ENST00000498837 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
SEC61A1-207ENST00000498837 COL22A1Q8NFW1 1626 aaPredicted RBP22.18■■□□□ 1.14
SEC61A1-207ENST00000498837 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
SEC61A1-207ENST00000498837 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
SEC61A1-207ENST00000498837 USP21Q9UK80 565 aa22.16■■□□□ 1.14
SEC61A1-207ENST00000498837 HFM1A2PYH4 1435 aa22.15■■□□□ 1.14
SEC61A1-207ENST00000498837 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms