RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
CCDC171-209ENST00000498725 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
CCDC171-209ENST00000498725 NWD1Q149M9 1564 aa14.38□□□□□ -0.11
CCDC171-209ENST00000498725 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
CCDC171-209ENST00000498725 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
CCDC171-209ENST00000498725 DAPK1P53355 1430 aa14.36□□□□□ -0.11
CCDC171-209ENST00000498725 NKTRP30414 1462 aaKnown RBP14.36□□□□□ -0.11
CCDC171-209ENST00000498725 COL16A1Q07092 1604 aaPredicted RBP14.35□□□□□ -0.11
CCDC171-209ENST00000498725 MEX3CQ5U5Q3 659 aaKnown RBP14.35□□□□□ -0.11
CCDC171-209ENST00000498725 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
CCDC171-209ENST00000498725 JCADQ9P266 1359 aa14.34□□□□□ -0.11
CCDC171-209ENST00000498725 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
CCDC171-209ENST00000498725 LMTK2Q8IWU2 1503 aa14.33□□□□□ -0.12
CCDC171-209ENST00000498725 PPP1R15AO75807 674 aaPredicted RBP14.33□□□□□ -0.12
CCDC171-209ENST00000498725 LRP6O75581 1613 aa14.32□□□□□ -0.12
CCDC171-209ENST00000498725 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
CCDC171-209ENST00000498725 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.31□□□□□ -0.12
CCDC171-209ENST00000498725 ANKRD30AQ9BXX3 1397 aa14.31□□□□□ -0.12
CCDC171-209ENST00000498725 NOS1P29475 1434 aa14.31□□□□□ -0.12
CCDC171-209ENST00000498725 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
CCDC171-209ENST00000498725 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
CCDC171-209ENST00000498725 RIMS2Q9UQ26 1411 aa14.3□□□□□ -0.12
CCDC171-209ENST00000498725 APLP2Q06481 763 aa14.29□□□□□ -0.12
CCDC171-209ENST00000498725 FGD6Q6ZV73 1430 aa14.29□□□□□ -0.12
CCDC171-209ENST00000498725 SHPRHQ149N8 1683 aa14.29□□□□□ -0.12
CCDC171-209ENST00000498725 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
CCDC171-209ENST00000498725 NUTM2BA6NNL0 878 aaPredicted RBP14.28□□□□□ -0.12
CCDC171-209ENST00000498725 NUTM2EB1AL46 878 aaPredicted RBP14.28□□□□□ -0.12
CCDC171-209ENST00000498725 NUTM2AQ8IVF1 878 aaPredicted RBP14.28□□□□□ -0.12
CCDC171-209ENST00000498725 UPF1Q92900 1129 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC171-209ENST00000498725 ZFYVE9O95405 1425 aa14.27□□□□□ -0.12
CCDC171-209ENST00000498725 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.12
CCDC171-209ENST00000498725 SLC52A1Q9NWF4 448 aa14.27□□□□□ -0.13
CCDC171-209ENST00000498725 SPATA31A6Q5VVP1 1343 aa14.25□□□□□ -0.13
CCDC171-209ENST00000498725 ZNF772Q68DY9 489 aaPredicted RBP14.25□□□□□ -0.13
CCDC171-209ENST00000498725 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
CCDC171-209ENST00000498725 ATF3P18847 181 aa14.24□□□□□ -0.13
CCDC171-209ENST00000498725 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
CCDC171-209ENST00000498725 FAM50AQ14320 339 aaKnown RBP14.24□□□□□ -0.13
CCDC171-209ENST00000498725 E9PCH4 1651 aa14.23□□□□□ -0.13
CCDC171-209ENST00000498725 RXRBP28702 533 aa14.22□□□□□ -0.13
CCDC171-209ENST00000498725 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
CCDC171-209ENST00000498725 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
CCDC171-209ENST00000498725 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
CCDC171-209ENST00000498725 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
CCDC171-209ENST00000498725 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC171-209ENST00000498725 C19orf44Q9H6X5 657 aa14.2□□□□□ -0.14
CCDC171-209ENST00000498725 ADAMTS13Q76LX8 1427 aa14.2□□□□□ -0.14
CCDC171-209ENST00000498725 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
CCDC171-209ENST00000498725 DIP2AQ14689 1571 aa14.2□□□□□ -0.14
CCDC171-209ENST00000498725 AFF2P51816 1311 aa14.19□□□□□ -0.14
CCDC171-209ENST00000498725 BRINP3Q76B58 766 aa14.19□□□□□ -0.14
CCDC171-209ENST00000498725 TRPM2O94759 1503 aa14.19□□□□□ -0.14
CCDC171-209ENST00000498725 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
CCDC171-209ENST00000498725 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
CCDC171-209ENST00000498725 UNC13BO14795 1591 aa14.17□□□□□ -0.14
CCDC171-209ENST00000498725 PTPRUQ92729 1446 aa14.16□□□□□ -0.14
CCDC171-209ENST00000498725 NHSL1Q5SYE7 1610 aa14.16□□□□□ -0.14
CCDC171-209ENST00000498725 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
CCDC171-209ENST00000498725 C8orf37Q96NL8 207 aa14.16□□□□□ -0.14
CCDC171-209ENST00000498725 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
CCDC171-209ENST00000498725 CDK12Q9NYV4 1490 aaPredicted RBP14.13□□□□□ -0.15
CCDC171-209ENST00000498725 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
CCDC171-209ENST00000498725 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
CCDC171-209ENST00000498725 IQGAP3Q86VI3 1631 aa14.13□□□□□ -0.15
CCDC171-209ENST00000498725 QTRT2Q9H974 415 aaKnown RBP14.13□□□□□ -0.15
CCDC171-209ENST00000498725 RGS12O14924 1447 aa14.13□□□□□ -0.15
CCDC171-209ENST00000498725 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
CCDC171-209ENST00000498725 NALCNQ8IZF0 1738 aa14.12□□□□□ -0.15
CCDC171-209ENST00000498725 MST1RQ04912 1400 aa14.11□□□□□ -0.15
CCDC171-209ENST00000498725 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
CCDC171-209ENST00000498725 ADAMTS2O95450 1211 aa14.1□□□□□ -0.15
CCDC171-209ENST00000498725 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
CCDC171-209ENST00000498725 LRRC59Q96AG4 307 aaKnown RBP14.1□□□□□ -0.15
CCDC171-209ENST00000498725 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
CCDC171-209ENST00000498725 ITGAEP38570 1179 aa14.09□□□□□ -0.15
CCDC171-209ENST00000498725 DCCP43146 1447 aa14.08□□□□□ -0.15
CCDC171-209ENST00000498725 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
CCDC171-209ENST00000498725 NGLY1Q96IV0 654 aa14.08□□□□□ -0.16
CCDC171-209ENST00000498725 NUP155O75694 1391 aa14.08□□□□□ -0.16
CCDC171-209ENST00000498725 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
CCDC171-209ENST00000498725 METP08581 1390 aa14.07□□□□□ -0.16
CCDC171-209ENST00000498725 SETBP1Q9Y6X0 1596 aa14.06□□□□□ -0.16
CCDC171-209ENST00000498725 ADGRL3Q9HAR2 1447 aa14.04□□□□□ -0.16
CCDC171-209ENST00000498725 KIF1BO60333 1816 aa14.03□□□□□ -0.16
CCDC171-209ENST00000498725 USP21Q9UK80 565 aa14.02□□□□□ -0.17
CCDC171-209ENST00000498725 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
CCDC171-209ENST00000498725 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
CCDC171-209ENST00000498725 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
CCDC171-209ENST00000498725 C1orf167Q5SNV9 1468 aa14□□□□□ -0.17
CCDC171-209ENST00000498725 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
CCDC171-209ENST00000498725 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
CCDC171-209ENST00000498725 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
CCDC171-209ENST00000498725 PPARGC1BQ86YN6 1023 aaKnown RBP13.98□□□□□ -0.17
CCDC171-209ENST00000498725 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
CCDC171-209ENST00000498725 LAMC1P11047 1609 aa13.97□□□□□ -0.17
CCDC171-209ENST00000498725 TRPC5Q9UL62 973 aaPredicted RBP13.97□□□□□ -0.17
CCDC171-209ENST00000498725 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
CCDC171-209ENST00000498725 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
CCDC171-209ENST00000498725 SOS2Q07890 1332 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms