RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 MSH6P52701 1360 aa9.34□□□□□ -0.91
FXN-205ENST00000498653 UBR1Q8IWV7 1749 aa9.34□□□□□ -0.92
FXN-205ENST00000498653 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
FXN-205ENST00000498653 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
FXN-205ENST00000498653 MIA2Q96PC5 1412 aa9.32□□□□□ -0.92
FXN-205ENST00000498653 NCOA2Q15596 1464 aa9.32□□□□□ -0.92
FXN-205ENST00000498653 SETD5Q9C0A6 1442 aa9.31□□□□□ -0.92
FXN-205ENST00000498653 POLA2Q14181 598 aa9.31□□□□□ -0.92
FXN-205ENST00000498653 COL13A1Q5TAT6 717 aaPredicted RBP9.31□□□□□ -0.92
FXN-205ENST00000498653 INO80Q9ULG1 1556 aaPredicted RBP9.31□□□□□ -0.92
FXN-205ENST00000498653 TRPC5Q9UL62 973 aaPredicted RBP9.3□□□□□ -0.92
FXN-205ENST00000498653 SLIT1O75093 1534 aa9.3□□□□□ -0.92
FXN-205ENST00000498653 A2MP01023 1474 aa9.29□□□□□ -0.92
FXN-205ENST00000498653 CAMSAP2Q08AD1 1489 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 PREX2Q70Z35 1606 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 ABCB7O75027 752 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 DSG3P32926 999 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 GGT6Q6P531 493 aa9.28□□□□□ -0.92
FXN-205ENST00000498653 PNPLA6Q8IY17 1366 aa9.27□□□□□ -0.93
FXN-205ENST00000498653 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
FXN-205ENST00000498653 GLI3P10071 1580 aa9.27□□□□□ -0.93
FXN-205ENST00000498653 GPATCH8Q9UKJ3 1502 aaKnown RBP9.26□□□□□ -0.93
FXN-205ENST00000498653 LTKP29376 864 aa9.26□□□□□ -0.93
FXN-205ENST00000498653 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
FXN-205ENST00000498653 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
FXN-205ENST00000498653 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
FXN-205ENST00000498653 USP21Q9UK80 565 aa9.26□□□□□ -0.93
FXN-205ENST00000498653 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.25□□□□□ -0.93
FXN-205ENST00000498653 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
FXN-205ENST00000498653 KCNA6P17658 529 aa9.25□□□□□ -0.93
FXN-205ENST00000498653 ASXL1Q8IXJ9 1541 aa9.25□□□□□ -0.93
FXN-205ENST00000498653 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.24□□□□□ -0.93
FXN-205ENST00000498653 TNS1Q9HBL0 1735 aaKnown RBP9.24□□□□□ -0.93
FXN-205ENST00000498653 TET3O43151 1660 aa9.23□□□□□ -0.93
FXN-205ENST00000498653 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
FXN-205ENST00000498653 TNS4Q8IZW8 715 aa9.23□□□□□ -0.93
FXN-205ENST00000498653 FNBP4Q8N3X1 1017 aaPredicted RBP9.23□□□□□ -0.93
FXN-205ENST00000498653 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
FXN-205ENST00000498653 HSPA6P17066 643 aa9.21□□□□□ -0.94
FXN-205ENST00000498653 BAG6P46379 1132 aa9.21□□□□□ -0.94
FXN-205ENST00000498653 BRINP3Q76B58 766 aa9.21□□□□□ -0.94
FXN-205ENST00000498653 DISP2A7MBM2 1401 aa9.21□□□□□ -0.94
FXN-205ENST00000498653 SYCP2Q9BX26 1530 aa9.21□□□□□ -0.94
FXN-205ENST00000498653 PCNTO95613 3336 aa9.2□□□□□ -0.94
FXN-205ENST00000498653 NRKQ7Z2Y5 1582 aa9.2□□□□□ -0.94
FXN-205ENST00000498653 RREB1Q92766 1687 aa9.2□□□□□ -0.94
FXN-205ENST00000498653 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
FXN-205ENST00000498653 GOLGB1Q14789 3259 aaKnown RBP9.19□□□□□ -0.94
FXN-205ENST00000498653 PPP1R1BQ9UD71 204 aaPredicted RBP9.19□□□□□ -0.94
FXN-205ENST00000498653 MYOM1P52179 1685 aa9.19□□□□□ -0.94
FXN-205ENST00000498653 NUP188Q5SRE5 1749 aa9.19□□□□□ -0.94
FXN-205ENST00000498653 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
FXN-205ENST00000498653 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
FXN-205ENST00000498653 PTCH1Q13635 1447 aa9.18□□□□□ -0.94
FXN-205ENST00000498653 ARHGAP35Q9NRY4 1499 aa9.18□□□□□ -0.94
FXN-205ENST00000498653 ERVK-7P63135 1459 aa9.17□□□□□ -0.94
FXN-205ENST00000498653 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
FXN-205ENST00000498653 CDC42BPAQ5VT25 1732 aa9.17□□□□□ -0.94
FXN-205ENST00000498653 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
FXN-205ENST00000498653 TXNDC2Q86VQ3 553 aa9.16□□□□□ -0.94
FXN-205ENST00000498653 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
FXN-205ENST00000498653 NCOA3Q9Y6Q9 1424 aa9.15□□□□□ -0.94
FXN-205ENST00000498653 SPAG9O60271 1321 aaKnown RBP9.15□□□□□ -0.94
FXN-205ENST00000498653 LRRC59Q96AG4 307 aaKnown RBP9.14□□□□□ -0.95
FXN-205ENST00000498653 SPON1Q9HCB6 807 aa9.14□□□□□ -0.95
FXN-205ENST00000498653 TROQ12816 1431 aaPredicted RBP9.14□□□□□ -0.95
FXN-205ENST00000498653 PRXQ9BXM0 1461 aa9.13□□□□□ -0.95
FXN-205ENST00000498653 LAMC1P11047 1609 aa9.13□□□□□ -0.95
FXN-205ENST00000498653 CASZ1Q86V15 1759 aa9.12□□□□□ -0.95
FXN-205ENST00000498653 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
FXN-205ENST00000498653 KCNQ2O43526 872 aa9.11□□□□□ -0.95
FXN-205ENST00000498653 EZH2Q15910 746 aaKnown RBP9.11□□□□□ -0.95
FXN-205ENST00000498653 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
FXN-205ENST00000498653 DNAJC5GQ8N7S2 189 aa9.11□□□□□ -0.95
FXN-205ENST00000498653 PIK3C2BO00750 1634 aa9.11□□□□□ -0.95
FXN-205ENST00000498653 ADGRB2O60241 1585 aa9.11□□□□□ -0.95
FXN-205ENST00000498653 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
FXN-205ENST00000498653 MYOM2P54296 1465 aa9.1□□□□□ -0.95
FXN-205ENST00000498653 MST1RQ04912 1400 aa9.09□□□□□ -0.95
FXN-205ENST00000498653 SEPT12Q8IYM1 358 aa9.09□□□□□ -0.95
FXN-205ENST00000498653 DDX17Q92841 729 aaKnown RBP9.09□□□□□ -0.95
FXN-205ENST00000498653 DLC1Q96QB1 1528 aa9.08□□□□□ -0.96
FXN-205ENST00000498653 LRRIQ1Q96JM4 1722 aa9.08□□□□□ -0.96
FXN-205ENST00000498653 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
FXN-205ENST00000498653 KRT27Q7Z3Y8 459 aa9.07□□□□□ -0.96
FXN-205ENST00000498653 EID1Q9Y6B2 187 aa9.07□□□□□ -0.96
FXN-205ENST00000498653 WASHC2CQ9Y4E1 1318 aa9.06□□□□□ -0.96
FXN-205ENST00000498653 DCCP43146 1447 aa9.06□□□□□ -0.96
FXN-205ENST00000498653 SLIT2O94813 1529 aa9.06□□□□□ -0.96
FXN-205ENST00000498653 CFAP65Q6ZU64 1925 aaKnown RBP9.06□□□□□ -0.96
FXN-205ENST00000498653 CAMKK2Q96RR4 588 aa9.06□□□□□ -0.96
FXN-205ENST00000498653 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
FXN-205ENST00000498653 ADGRB3O60242 1522 aa9.05□□□□□ -0.96
FXN-205ENST00000498653 ATF3P18847 181 aa9.05□□□□□ -0.96
FXN-205ENST00000498653 C19orf44Q9H6X5 657 aa9.05□□□□□ -0.96
FXN-205ENST00000498653 WDR90Q96KV7 1748 aa9.05□□□□□ -0.96
FXN-205ENST00000498653 KIAA1210Q9ULL0 1709 aa9.05□□□□□ -0.96
FXN-205ENST00000498653 TMEM131LA2VDJ0 1609 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms