RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 PPP1R15AO75807 674 aaPredicted RBP38.9■■■■□ 3.82
MKRN1-216ENST00000498535 UNC13BO14795 1591 aa38.9■■■■□ 3.82
MKRN1-216ENST00000498535 GCC2Q8IWJ2 1684 aa38.89■■■■□ 3.82
MKRN1-216ENST00000498535 CHGAP10645 457 aaKnown RBP38.85■■■■□ 3.81
MKRN1-216ENST00000498535 RIMS2Q9UQ26 1411 aa38.85■■■■□ 3.81
MKRN1-216ENST00000498535 ZFYVE9O95405 1425 aa38.84■■■■□ 3.81
MKRN1-216ENST00000498535 FAM135BQ49AJ0 1406 aa38.84■■■■□ 3.81
MKRN1-216ENST00000498535 PLEKHG1Q9ULL1 1385 aa38.83■■■■□ 3.81
MKRN1-216ENST00000498535 ITGAEP38570 1179 aa38.83■■■■□ 3.81
MKRN1-216ENST00000498535 RBM33Q96EV2 1170 aaKnown RBP38.83■■■■□ 3.81
MKRN1-216ENST00000498535 NKTRP30414 1462 aaKnown RBP38.83■■■■□ 3.81
MKRN1-216ENST00000498535 MYO5BQ9ULV0 1848 aa38.82■■■■□ 3.81
MKRN1-216ENST00000498535 TMEM131LA2VDJ0 1609 aa38.81■■■■□ 3.8
MKRN1-216ENST00000498535 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.8■■■■□ 3.8
MKRN1-216ENST00000498535 NWD1Q149M9 1564 aa38.79■■■■□ 3.8
MKRN1-216ENST00000498535 E9PCH4 1651 aa38.78■■■■□ 3.8
MKRN1-216ENST00000498535 NUP155O75694 1391 aa38.77■■■■□ 3.8
MKRN1-216ENST00000498535 IQGAP3Q86VI3 1631 aa38.76■■■■□ 3.8
MKRN1-216ENST00000498535 PPARGC1BQ86YN6 1023 aaKnown RBP38.76■■■■□ 3.8
MKRN1-216ENST00000498535 MSH6P52701 1360 aa38.75■■■■□ 3.79
MKRN1-216ENST00000498535 TBX22Q9Y458 520 aa38.72■■■■□ 3.79
MKRN1-216ENST00000498535 CHD2O14647 1828 aaKnown RBP38.69■■■■□ 3.78
MKRN1-216ENST00000498535 NUTM2DQ5VT03 806 aaPredicted RBP38.68■■■■□ 3.78
MKRN1-216ENST00000498535 ROBO1Q9Y6N7 1651 aa38.68■■■■□ 3.78
MKRN1-216ENST00000498535 SLAIN2Q9P270 581 aa38.65■■■■□ 3.78
MKRN1-216ENST00000498535 C14orf37Q86TY3 774 aa38.6■■■■□ 3.77
MKRN1-216ENST00000498535 ADAMTS13Q76LX8 1427 aa38.58■■■■□ 3.77
MKRN1-216ENST00000498535 DIP2AQ14689 1571 aa38.57■■■■□ 3.77
MKRN1-216ENST00000498535 NCOA3Q9Y6Q9 1424 aa38.57■■■■□ 3.77
MKRN1-216ENST00000498535 PIK3R4Q99570 1358 aa38.57■■■■□ 3.76
MKRN1-216ENST00000498535 RGS17Q9UGC6 210 aaPredicted RBP38.54■■■■□ 3.76
MKRN1-216ENST00000498535 TRPM2O94759 1503 aa38.48■■■■□ 3.75
MKRN1-216ENST00000498535 ZNF326Q5BKZ1 582 aaKnown RBP38.47■■■■□ 3.75
MKRN1-216ENST00000498535 C19orf44Q9H6X5 657 aa38.47■■■■□ 3.75
MKRN1-216ENST00000498535 PHLPP1O60346 1717 aa38.46■■■■□ 3.75
MKRN1-216ENST00000498535 SPHKAPQ2M3C7 1700 aa38.46■■■■□ 3.75
MKRN1-216ENST00000498535 ATF3P18847 181 aa38.46■■■■□ 3.75
MKRN1-216ENST00000498535 CADPS2Q86UW7 1296 aa38.46■■■■□ 3.75
MKRN1-216ENST00000498535 AMOTL2Q9Y2J4 779 aa38.46■■■■□ 3.75
MKRN1-216ENST00000498535 JCADQ9P266 1359 aa38.42■■■■□ 3.74
MKRN1-216ENST00000498535 RRBP1Q9P2E9 1410 aaKnown RBP38.41■■■■□ 3.74
MKRN1-216ENST00000498535 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.38■■■■□ 3.74
MKRN1-216ENST00000498535 PTPRUQ92729 1446 aa38.38■■■■□ 3.73
MKRN1-216ENST00000498535 POTEAQ6S8J7 498 aa38.34■■■■□ 3.73
MKRN1-216ENST00000498535 SETBP1Q9Y6X0 1596 aa38.34■■■■□ 3.73
MKRN1-216ENST00000498535 NAIPQ13075 1403 aa38.33■■■■□ 3.73
MKRN1-216ENST00000498535 COL16A1Q07092 1604 aaPredicted RBP38.3■■■■□ 3.72
MKRN1-216ENST00000498535 NRXN3Q9Y4C0 1643 aa38.3■■■■□ 3.72
MKRN1-216ENST00000498535 CLTCL1P53675 1640 aa38.27■■■■□ 3.72
MKRN1-216ENST00000498535 TRIM52Q96A61 297 aa38.27■■■■□ 3.72
MKRN1-216ENST00000498535 METP08581 1390 aa38.25■■■■□ 3.71
MKRN1-216ENST00000498535 DCCP43146 1447 aa38.25■■■■□ 3.71
MKRN1-216ENST00000498535 XRN1Q8IZH2 1706 aaKnown RBP38.25■■■■□ 3.71
MKRN1-216ENST00000498535 SPATA31A6Q5VVP1 1343 aa38.24■■■■□ 3.71
MKRN1-216ENST00000498535 AHDC1Q5TGY3 1603 aaPredicted RBP38.23■■■■□ 3.71
MKRN1-216ENST00000498535 BRINP3Q76B58 766 aa38.22■■■■□ 3.71
MKRN1-216ENST00000498535 KIF1BO60333 1816 aa38.22■■■■□ 3.71
MKRN1-216ENST00000498535 NEXMIFQ5QGS0 1516 aa38.21■■■■□ 3.71
MKRN1-216ENST00000498535 MEX3CQ5U5Q3 659 aaKnown RBP38.2■■■■□ 3.71
MKRN1-216ENST00000498535 HFM1A2PYH4 1435 aa38.18■■■■□ 3.7
MKRN1-216ENST00000498535 VGFO15240 615 aaPredicted RBP38.15■■■■□ 3.7
MKRN1-216ENST00000498535 SLC4A1APQ9BWU0 796 aaKnown RBP38.15■■■■□ 3.7
MKRN1-216ENST00000498535 SHPRHQ149N8 1683 aa38.11■■■■□ 3.69
MKRN1-216ENST00000498535 LRP6O75581 1613 aa38.11■■■■□ 3.69
MKRN1-216ENST00000498535 MST1RQ04912 1400 aa38.11■■■■□ 3.69
MKRN1-216ENST00000498535 ASXL1Q8IXJ9 1541 aa38.1■■■■□ 3.69
MKRN1-216ENST00000498535 ADGRL3Q9HAR2 1447 aa38.09■■■■□ 3.69
MKRN1-216ENST00000498535 RPGRIP1LQ68CZ1 1315 aa38.08■■■■□ 3.69
MKRN1-216ENST00000498535 ZNF772Q68DY9 489 aaPredicted RBP38.07■■■■□ 3.68
MKRN1-216ENST00000498535 NUTM2BA6NNL0 878 aaPredicted RBP38.03■■■■□ 3.68
MKRN1-216ENST00000498535 NUTM2EB1AL46 878 aaPredicted RBP38.03■■■■□ 3.68
MKRN1-216ENST00000498535 NUTM2AQ8IVF1 878 aaPredicted RBP38.03■■■■□ 3.68
MKRN1-216ENST00000498535 LRRC59Q96AG4 307 aaKnown RBP38.01■■■■□ 3.68
MKRN1-216ENST00000498535 SETD5Q9C0A6 1442 aa38.01■■■■□ 3.68
MKRN1-216ENST00000498535 NALCNQ8IZF0 1738 aa37.99■■■■□ 3.67
MKRN1-216ENST00000498535 NHSL1Q5SYE7 1610 aa37.98■■■■□ 3.67
MKRN1-216ENST00000498535 PTCH1Q13635 1447 aa37.97■■■■□ 3.67
MKRN1-216ENST00000498535 FOXD1Q16676 465 aa37.93■■■■□ 3.66
MKRN1-216ENST00000498535 DDX17Q92841 729 aaKnown RBP37.93■■■■□ 3.66
MKRN1-216ENST00000498535 ROBO2Q9HCK4 1378 aa37.93■■■■□ 3.66
MKRN1-216ENST00000498535 SETD1AO15047 1707 aaKnown RBP37.92■■■■□ 3.66
MKRN1-216ENST00000498535 C1orf167Q5SNV9 1468 aa37.91■■■■□ 3.66
MKRN1-216ENST00000498535 PPLO60437 1756 aa37.91■■■■□ 3.66
MKRN1-216ENST00000498535 CCDC144AA2RUR9 1427 aa37.87■■■■□ 3.65
MKRN1-216ENST00000498535 RXRBP28702 533 aa37.86■■■■□ 3.65
MKRN1-216ENST00000498535 PRAG1Q86YV5 1406 aa37.86■■■■□ 3.65
MKRN1-216ENST00000498535 AFF2P51816 1311 aa37.85■■■■□ 3.65
MKRN1-216ENST00000498535 PNPLA6Q8IY17 1366 aa37.83■■■■□ 3.65
MKRN1-216ENST00000498535 RGL3Q3MIN7 710 aa37.82■■■■□ 3.64
MKRN1-216ENST00000498535 ORAI2Q96SN7 254 aa37.82■■■■□ 3.64
MKRN1-216ENST00000498535 MPHOSPH9Q99550 1183 aa37.82■■■■□ 3.64
MKRN1-216ENST00000498535 C8orf37Q96NL8 207 aa37.79■■■■□ 3.64
MKRN1-216ENST00000498535 ADGRF5Q8IZF2 1346 aa37.79■■■■□ 3.64
MKRN1-216ENST00000498535 ANKRD30BQ9BXX2 1392 aa37.76■■■■□ 3.64
MKRN1-216ENST00000498535 SOS2Q07890 1332 aaPredicted RBP37.75■■■■□ 3.63
MKRN1-216ENST00000498535 LAMC1P11047 1609 aa37.73■■■■□ 3.63
MKRN1-216ENST00000498535 SPATA31E1Q6ZUB1 1445 aa37.73■■■■□ 3.63
MKRN1-216ENST00000498535 STK26Q9P289 416 aa37.72■■■■□ 3.63
MKRN1-216ENST00000498535 CDK12Q9NYV4 1490 aaPredicted RBP37.71■■■■□ 3.63
MKRN1-216ENST00000498535 ACIN1Q9UKV3 1341 aaKnown RBP37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms