RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PRSS12P56730 875 aa13.92□□□□□ -0.18
SNX13-212ENST00000498463 QPCTQ16769 361 aa13.92□□□□□ -0.18
SNX13-212ENST00000498463 AP1G2O75843 785 aa13.9□□□□□ -0.18
SNX13-212ENST00000498463 EVX2Q03828 476 aa13.9□□□□□ -0.18
SNX13-212ENST00000498463 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.18
SNX13-212ENST00000498463 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
SNX13-212ENST00000498463 LILRB3O75022 631 aa13.89□□□□□ -0.19
SNX13-212ENST00000498463 NUTM1Q86Y26 1132 aa13.89□□□□□ -0.19
SNX13-212ENST00000498463 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
SNX13-212ENST00000498463 PBXIP1Q96AQ6 731 aa13.89□□□□□ -0.19
SNX13-212ENST00000498463 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
SNX13-212ENST00000498463 RCCD1A6NED2 376 aa13.88□□□□□ -0.19
SNX13-212ENST00000498463 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
SNX13-212ENST00000498463 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
SNX13-212ENST00000498463 GJA5P36382 358 aa13.87□□□□□ -0.19
SNX13-212ENST00000498463 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
SNX13-212ENST00000498463 HAX1O00165 279 aa13.86□□□□□ -0.19
SNX13-212ENST00000498463 FOXD4L5Q5VV16 416 aaPredicted RBP13.86□□□□□ -0.19
SNX13-212ENST00000498463 SULF1Q8IWU6 871 aa13.86□□□□□ -0.19
SNX13-212ENST00000498463 ZNF710Q8N1W2 664 aa13.86□□□□□ -0.19
SNX13-212ENST00000498463 FOXD4L4Q8WXT5 416 aaPredicted RBP13.86□□□□□ -0.19
SNX13-212ENST00000498463 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
SNX13-212ENST00000498463 RTL5Q5HYW3 569 aaPredicted RBP13.85□□□□□ -0.19
SNX13-212ENST00000498463 ADAM33Q9BZ11 813 aa13.85□□□□□ -0.19
SNX13-212ENST00000498463 NDUFV2P19404 249 aa13.84□□□□□ -0.19
SNX13-212ENST00000498463 ADAMTS19Q8TE59 1207 aa13.84□□□□□ -0.19
SNX13-212ENST00000498463 USTQ9Y2C2 406 aa13.84□□□□□ -0.19
SNX13-212ENST00000498463 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
SNX13-212ENST00000498463 EYA1Q99502 592 aa13.83□□□□□ -0.2
SNX13-212ENST00000498463 FAM198AQ9UFP1 575 aa13.83□□□□□ -0.2
SNX13-212ENST00000498463 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
SNX13-212ENST00000498463 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.82□□□□□ -0.2
SNX13-212ENST00000498463 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
SNX13-212ENST00000498463 KCNA1Q09470 495 aa13.82□□□□□ -0.2
SNX13-212ENST00000498463 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
SNX13-212ENST00000498463 BRD1O95696 1058 aa13.81□□□□□ -0.2
SNX13-212ENST00000498463 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
SNX13-212ENST00000498463 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
SNX13-212ENST00000498463 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
SNX13-212ENST00000498463 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
SNX13-212ENST00000498463 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
SNX13-212ENST00000498463 CFAP70Q5T0N1 1121 aa13.8□□□□□ -0.2
SNX13-212ENST00000498463 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
SNX13-212ENST00000498463 NUTM2AQ8IVF1 878 aaPredicted RBP13.8□□□□□ -0.2
SNX13-212ENST00000498463 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
SNX13-212ENST00000498463 CSB-PGBD3P0DP91 1061 aa13.78□□□□□ -0.2
SNX13-212ENST00000498463 RFX1P22670 979 aa13.78□□□□□ -0.2
SNX13-212ENST00000498463 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
SNX13-212ENST00000498463 PRPF38BQ5VTL8 546 aaKnown RBP13.78□□□□□ -0.2
SNX13-212ENST00000498463 DNAJB2P25686 324 aa13.76□□□□□ -0.21
SNX13-212ENST00000498463 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
SNX13-212ENST00000498463 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
SNX13-212ENST00000498463 GPR37L1O60883 481 aa13.75□□□□□ -0.21
SNX13-212ENST00000498463 C7P10643 843 aa13.75□□□□□ -0.21
SNX13-212ENST00000498463 ZBTB3Q9H5J0 574 aa13.74□□□□□ -0.21
SNX13-212ENST00000498463 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
SNX13-212ENST00000498463 PPP1R12CQ9BZL4 782 aa13.73□□□□□ -0.21
SNX13-212ENST00000498463 COL9A1P20849 921 aa13.72□□□□□ -0.21
SNX13-212ENST00000498463 NUDT18Q6ZVK8 323 aa13.72□□□□□ -0.21
SNX13-212ENST00000498463 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
SNX13-212ENST00000498463 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
SNX13-212ENST00000498463 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.72□□□□□ -0.21
SNX13-212ENST00000498463 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
SNX13-212ENST00000498463 C3orf80F5H4A9 247 aa13.71□□□□□ -0.21
SNX13-212ENST00000498463 KDM4AO75164 1064 aa13.71□□□□□ -0.21
SNX13-212ENST00000498463 NUDT7P0C024 238 aa13.71□□□□□ -0.21
SNX13-212ENST00000498463 TRIM34Q9BYJ4 488 aa13.71□□□□□ -0.21
SNX13-212ENST00000498463 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
SNX13-212ENST00000498463 NBPF26B4DH59 902 aa13.69□□□□□ -0.22
SNX13-212ENST00000498463 VAC14Q08AM6 782 aa13.69□□□□□ -0.22
SNX13-212ENST00000498463 RDH13Q8NBN7 331 aa13.69□□□□□ -0.22
SNX13-212ENST00000498463 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
SNX13-212ENST00000498463 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
SNX13-212ENST00000498463 HOXA2O43364 376 aa13.67□□□□□ -0.22
SNX13-212ENST00000498463 USP46P62068 366 aa13.67□□□□□ -0.22
SNX13-212ENST00000498463 KHSRPQ92945 711 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■□□ 17.9
SNX13-212ENST00000498463 GABBR2O75899 941 aa13.66□□□□□ -0.22
SNX13-212ENST00000498463 FDX1P10109 184 aa13.66□□□□□ -0.22
SNX13-212ENST00000498463 CTDSPL2Q05D32 466 aa13.66□□□□□ -0.22
SNX13-212ENST00000498463 ALG2Q9H553 416 aa13.66□□□□□ -0.22
SNX13-212ENST00000498463 TATDN2Q93075 761 aa13.65□□□□□ -0.22
SNX13-212ENST00000498463 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
SNX13-212ENST00000498463 UCN2Q96RP3 112 aa13.64□□□□□ -0.23
SNX13-212ENST00000498463 IVNS1ABPQ9Y6Y0 642 aa13.64□□□□□ -0.23
SNX13-212ENST00000498463 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
SNX13-212ENST00000498463 LMOD1P29536 600 aaPredicted RBP13.63□□□□□ -0.23
SNX13-212ENST00000498463 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
SNX13-212ENST00000498463 PCDHGC3Q9UN70 934 aa13.63□□□□□ -0.23
SNX13-212ENST00000498463 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
SNX13-212ENST00000498463 HELBQ8NG08 1087 aaPredicted RBP13.62□□□□□ -0.23
SNX13-212ENST00000498463 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
SNX13-212ENST00000498463 E9PSI1 815 aa13.61□□□□□ -0.23
SNX13-212ENST00000498463 GCGRP47871 477 aa13.61□□□□□ -0.23
SNX13-212ENST00000498463 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX13-212ENST00000498463 LRRN4Q8WUT4 740 aa13.61□□□□□ -0.23
SNX13-212ENST00000498463 TRIM6-TRIM34B2RNG4 842 aa13.6□□□□□ -0.23
SNX13-212ENST00000498463 TFIP11Q9UBB9 837 aaKnown RBP13.6□□□□□ -0.23
SNX13-212ENST00000498463 GUCA2AQ02747 115 aa13.59□□□□□ -0.23
SNX13-212ENST00000498463 PPP4R3BQ5MIZ7 849 aa13.59□□□□□ -0.23
SNX13-212ENST00000498463 PACS2Q86VP3 889 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms